RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 SMARCA5O60264 1052 aaPredicted RBP16■□□□□ 0.15
PDZRN3-205ENST00000466780 CEP85Q6P2H3 762 aa16■□□□□ 0.15
PDZRN3-205ENST00000466780 KIAA1211Q6ZU35 1233 aa16■□□□□ 0.15
PDZRN3-205ENST00000466780 ANP32BQ92688 251 aaKnown RBP16■□□□□ 0.15
PDZRN3-205ENST00000466780 RBSNQ9H1K0 784 aa16■□□□□ 0.15
PDZRN3-205ENST00000466780 ZDHHC9Q9Y397 364 aa16■□□□□ 0.15
PDZRN3-205ENST00000466780 KRT24Q2M2I5 525 aa15.99■□□□□ 0.15
PDZRN3-205ENST00000466780 CPSF1Q10570 1443 aaKnown RBP15.99■□□□□ 0.15
PDZRN3-205ENST00000466780 EDC4Q6P2E9 1401 aaKnown RBP15.98■□□□□ 0.15
PDZRN3-205ENST00000466780 AATKQ6ZMQ8 1374 aa15.98■□□□□ 0.15
PDZRN3-205ENST00000466780 OFD1O75665 1012 aa15.98■□□□□ 0.15
PDZRN3-205ENST00000466780 CWC22Q9HCG8 908 aaKnown RBP15.98■□□□□ 0.15
PDZRN3-205ENST00000466780 RRS1Q15050 365 aaKnown RBP15.98■□□□□ 0.15
PDZRN3-205ENST00000466780 RPAP2Q8IXW5 612 aaPredicted RBP15.98■□□□□ 0.15
PDZRN3-205ENST00000466780 GPT2Q8TD30 523 aa15.98■□□□□ 0.15
PDZRN3-205ENST00000466780 DLC1Q96QB1 1528 aa15.98■□□□□ 0.15
PDZRN3-205ENST00000466780 RTL1A6NKG5 1358 aa15.97■□□□□ 0.15
PDZRN3-205ENST00000466780 APBB1O00213 710 aa15.97■□□□□ 0.15
PDZRN3-205ENST00000466780 PRPF40AO75400 957 aaKnown RBP15.97■□□□□ 0.15
PDZRN3-205ENST00000466780 PRIM1P49642 420 aaKnown RBP15.97■□□□□ 0.15
PDZRN3-205ENST00000466780 CHAMP1Q96JM3 812 aa15.97■□□□□ 0.15
PDZRN3-205ENST00000466780 RBM27Q9P2N5 1060 aaKnown RBP15.97■□□□□ 0.15
PDZRN3-205ENST00000466780 MSH6P52701 1360 aa15.97■□□□□ 0.15
PDZRN3-205ENST00000466780 PDLIM2Q96JY6 352 aa15.96■□□□□ 0.15
PDZRN3-205ENST00000466780 ST18O60284 1047 aa15.96■□□□□ 0.15
PDZRN3-205ENST00000466780 VSIG10Q8N0Z9 540 aa15.96■□□□□ 0.15
PDZRN3-205ENST00000466780 MSNP26038 577 aaKnown RBP15.96■□□□□ 0.14
PDZRN3-205ENST00000466780 MEIS3Q99687 375 aa15.96■□□□□ 0.14
PDZRN3-205ENST00000466780 TSPOAP1O95153 1857 aa15.95■□□□□ 0.14
PDZRN3-205ENST00000466780 CPS1P31327 1500 aa15.95■□□□□ 0.14
PDZRN3-205ENST00000466780 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.95■□□□□ 0.14
PDZRN3-205ENST00000466780 RIMBP3CA6NJZ7 1639 aa15.94■□□□□ 0.14
PDZRN3-205ENST00000466780 RIMBP3BA6NNM3 1639 aa15.94■□□□□ 0.14
PDZRN3-205ENST00000466780 RIMBP3Q9UFD9 1639 aa15.94■□□□□ 0.14
PDZRN3-205ENST00000466780 HS1BP3Q53T59 392 aa15.94■□□□□ 0.14
PDZRN3-205ENST00000466780 CASC1Q6TDU7 716 aa15.94■□□□□ 0.14
PDZRN3-205ENST00000466780 AEBP1Q8IUX7 1158 aa15.94■□□□□ 0.14
PDZRN3-205ENST00000466780 NSFL1CQ9UNZ2 370 aaKnown RBP15.94■□□□□ 0.14
PDZRN3-205ENST00000466780 NCKAP5LQ9HCH0 1330 aa15.93■□□□□ 0.14
PDZRN3-205ENST00000466780 REC8O95072 547 aa15.93■□□□□ 0.14
PDZRN3-205ENST00000466780 NOL7Q9UMY1 257 aaKnown RBP15.93■□□□□ 0.14
PDZRN3-205ENST00000466780 SETD1AO15047 1707 aaKnown RBP15.93■□□□□ 0.14
PDZRN3-205ENST00000466780 WASLO00401 505 aaPredicted RBP15.93■□□□□ 0.14
PDZRN3-205ENST00000466780 CHL1O00533 1208 aa15.93■□□□□ 0.14
PDZRN3-205ENST00000466780 COG3Q96JB2 828 aa15.93■□□□□ 0.14
PDZRN3-205ENST00000466780 TMEM63CQ9P1W3 806 aa15.93■□□□□ 0.14
PDZRN3-205ENST00000466780 ERC2O15083 957 aa15.92■□□□□ 0.14
PDZRN3-205ENST00000466780 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.92■□□□□ 0.14
PDZRN3-205ENST00000466780 ZMYND15Q9H091 742 aa15.91■□□□□ 0.14
PDZRN3-205ENST00000466780 ESF1Q9H501 851 aaKnown RBP15.91■□□□□ 0.14
PDZRN3-205ENST00000466780 ZNF500O60304 480 aaPredicted RBP15.9■□□□□ 0.14
PDZRN3-205ENST00000466780 MCM10Q7L590 875 aa15.9■□□□□ 0.14
PDZRN3-205ENST00000466780 PTPRCP08575 1304 aa15.9■□□□□ 0.14
PDZRN3-205ENST00000466780 KIAA0232Q92628 1395 aa15.9■□□□□ 0.14
PDZRN3-205ENST00000466780 LRSAM1Q6UWE0 723 aa15.9■□□□□ 0.14
PDZRN3-205ENST00000466780 A2ML1A8K2U0 1454 aa15.9■□□□□ 0.14
PDZRN3-205ENST00000466780 MON2Q7Z3U7 1717 aa15.89■□□□□ 0.13
PDZRN3-205ENST00000466780 SYCE3A1L190 88 aa15.89■□□□□ 0.13
PDZRN3-205ENST00000466780 TERF1P54274 439 aa15.89■□□□□ 0.13
PDZRN3-205ENST00000466780 FOXD4L5Q5VV16 416 aaPredicted RBP15.89■□□□□ 0.13
PDZRN3-205ENST00000466780 SULT6B1Q6IMI4 303 aa15.89■□□□□ 0.13
PDZRN3-205ENST00000466780 TXNDC2Q86VQ3 553 aa15.89■□□□□ 0.13
PDZRN3-205ENST00000466780 FOXD4L4Q8WXT5 416 aaPredicted RBP15.89■□□□□ 0.13
PDZRN3-205ENST00000466780 NUDT16Q96DE0 195 aaKnown RBP15.89■□□□□ 0.13
PDZRN3-205ENST00000466780 PDCL3Q9H2J4 239 aa15.89■□□□□ 0.13
PDZRN3-205ENST00000466780 OSBPL3Q9H4L5 887 aa15.89■□□□□ 0.13
PDZRN3-205ENST00000466780 PPP6R1Q9UPN7 881 aa15.89■□□□□ 0.13
PDZRN3-205ENST00000466780 PDE1AP54750 535 aa15.89■□□□□ 0.13
PDZRN3-205ENST00000466780 EIF4A2Q14240 407 aaKnown RBP15.89■□□□□ 0.13
PDZRN3-205ENST00000466780 TMX3Q96JJ7 454 aa15.89■□□□□ 0.13
PDZRN3-205ENST00000466780 NRKQ7Z2Y5 1582 aa15.89■□□□□ 0.13
PDZRN3-205ENST00000466780 NEK4P51957 841 aa15.88■□□□□ 0.13
PDZRN3-205ENST00000466780 HAP1P54257 671 aaPredicted RBP15.88■□□□□ 0.13
PDZRN3-205ENST00000466780 XPCQ01831 940 aaPredicted RBP15.88■□□□□ 0.13
PDZRN3-205ENST00000466780 R3HCC1Q9Y3T6 440 aaKnown RBP15.88■□□□□ 0.13
PDZRN3-205ENST00000466780 DIP2BQ9P265 1576 aa15.87■□□□□ 0.13
PDZRN3-205ENST00000466780 C3P01024 1663 aa15.87■□□□□ 0.13
PDZRN3-205ENST00000466780 SLC4A2P04920 1241 aa15.87■□□□□ 0.13
PDZRN3-205ENST00000466780 PKNOX2Q96KN3 472 aa15.87■□□□□ 0.13
PDZRN3-205ENST00000466780 ZKSCAN5Q9Y2L8 839 aa15.87■□□□□ 0.13
PDZRN3-205ENST00000466780 BRD1O95696 1058 aa15.86■□□□□ 0.13
PDZRN3-205ENST00000466780 TSHZ3Q63HK5 1081 aa15.86■□□□□ 0.13
PDZRN3-205ENST00000466780 G2E3Q7L622 706 aa15.86■□□□□ 0.13
PDZRN3-205ENST00000466780 SALL3Q9BXA9 1300 aa15.86■□□□□ 0.13
PDZRN3-205ENST00000466780 HMMRO75330 724 aa15.86■□□□□ 0.13
PDZRN3-205ENST00000466780 PALD1Q9ULE6 856 aa15.86■□□□□ 0.13
PDZRN3-205ENST00000466780 CCDC61Q9Y6R9 512 aa15.86■□□□□ 0.13
PDZRN3-205ENST00000466780 CRB1P82279 1406 aa15.85■□□□□ 0.13
PDZRN3-205ENST00000466780 METP08581 1390 aa15.85■□□□□ 0.13
PDZRN3-205ENST00000466780 F6X3S4 739 aa15.85■□□□□ 0.13
PDZRN3-205ENST00000466780 RBM10P98175 930 aaKnown RBP15.85■□□□□ 0.13
PDZRN3-205ENST00000466780 CUL4AQ13619 759 aa15.85■□□□□ 0.13
PDZRN3-205ENST00000466780 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.85■□□□□ 0.13
PDZRN3-205ENST00000466780 ESYT1Q9BSJ8 1104 aa15.85■□□□□ 0.13
PDZRN3-205ENST00000466780 AKAP12Q02952 1782 aa15.85■□□□□ 0.13
PDZRN3-205ENST00000466780 MIS18AQ9NYP9 233 aa15.84■□□□□ 0.13
PDZRN3-205ENST00000466780 NRXN3Q9Y4C0 1643 aa15.84■□□□□ 0.13
PDZRN3-205ENST00000466780 TUBGCP6Q96RT7 1819 aa15.84■□□□□ 0.13
PDZRN3-205ENST00000466780 MBD3O95983 291 aa15.84■□□□□ 0.13
PDZRN3-205ENST00000466780 SLC4A10Q6U841 1118 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms