RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 SEMA3FQ13275 785 aa8.04□□□□□ -1.12
LINC00393-202ENST00000452852 AGBL1Q96MI9 1066 aa8.04□□□□□ -1.12
LINC00393-202ENST00000452852 TSEN34Q9BSV6 310 aaKnown RBP8.04□□□□□ -1.12
LINC00393-202ENST00000452852 PCDHB11Q9Y5F2 797 aa8.04□□□□□ -1.12
LINC00393-202ENST00000452852 BMP2P12643 396 aa8.03□□□□□ -1.12
LINC00393-202ENST00000452852 SOX11P35716 441 aa8.03□□□□□ -1.12
LINC00393-202ENST00000452852 RASSF7Q02833 373 aa8.03□□□□□ -1.12
LINC00393-202ENST00000452852 XP32Q5T750 250 aa8.03□□□□□ -1.12
LINC00393-202ENST00000452852 CCDC125Q86Z20 511 aa8.03□□□□□ -1.12
LINC00393-202ENST00000452852 PHTF2Q8N3S3 785 aa8.03□□□□□ -1.12
LINC00393-202ENST00000452852 CCDC85AQ96PX6 553 aaPredicted RBP8.03□□□□□ -1.12
LINC00393-202ENST00000452852 POM121CA8CG34 1229 aa8.02□□□□□ -1.13
LINC00393-202ENST00000452852 TSGA10IPQ3SY00 556 aa8.02□□□□□ -1.13
LINC00393-202ENST00000452852 SLFNL1Q499Z3 407 aa8.02□□□□□ -1.13
LINC00393-202ENST00000452852 ADH1AP07327 375 aa8.01□□□□□ -1.13
LINC00393-202ENST00000452852 SCTRP47872 440 aa8.01□□□□□ -1.13
LINC00393-202ENST00000452852 RELBQ01201 579 aa8.01□□□□□ -1.13
LINC00393-202ENST00000452852 PROSER2Q86WR7 435 aaPredicted RBP8.01□□□□□ -1.13
LINC00393-202ENST00000452852 RNF135Q8IUD6 432 aa8.01□□□□□ -1.13
LINC00393-202ENST00000452852 FNBP4Q8N3X1 1017 aaPredicted RBP8.01□□□□□ -1.13
LINC00393-202ENST00000452852 CDCA7Q9BWT1 371 aaPredicted RBP8.01□□□□□ -1.13
LINC00393-202ENST00000452852 ALG2Q9H553 416 aa8.01□□□□□ -1.13
LINC00393-202ENST00000452852 GSK3AP49840 483 aa8□□□□□ -1.13
LINC00393-202ENST00000452852 ERVK-9P63128 1117 aa8□□□□□ -1.13
LINC00393-202ENST00000452852 CC2D2BQ6DHV5 1058 aa8□□□□□ -1.13
LINC00393-202ENST00000452852 KDF1Q8NAX2 398 aaPredicted RBP8□□□□□ -1.13
LINC00393-202ENST00000452852 TRIM52Q96A61 297 aa8□□□□□ -1.13
LINC00393-202ENST00000452852 A6NJR5 290 aa7.99□□□□□ -1.13
LINC00393-202ENST00000452852 SPINT1O43278 529 aa7.99□□□□□ -1.13
LINC00393-202ENST00000452852 IGHA1P01876 353 aa7.99□□□□□ -1.13
LINC00393-202ENST00000452852 ZMYND15Q9H091 742 aa7.99□□□□□ -1.13
LINC00393-202ENST00000452852 ZNF395Q9H8N7 513 aaPredicted RBP7.99□□□□□ -1.13
LINC00393-202ENST00000452852 SOBPA7XYQ1 873 aa7.98□□□□□ -1.13
LINC00393-202ENST00000452852 PTGIRP43119 386 aa7.98□□□□□ -1.13
LINC00393-202ENST00000452852 ADAMTS19Q8TE59 1207 aa7.98□□□□□ -1.13
LINC00393-202ENST00000452852 CHIC2Q9UKJ5 165 aa7.98□□□□□ -1.13
LINC00393-202ENST00000452852 DOLKQ9UPQ8 538 aa7.98□□□□□ -1.13
LINC00393-202ENST00000452852 SOS2Q07890 1332 aaPredicted RBP7.98□□□□□ -1.13
LINC00393-202ENST00000452852 PIK3CDO00329 1044 aa7.97□□□□□ -1.13
LINC00393-202ENST00000452852 HDGFL1Q5TGJ6 251 aa7.97□□□□□ -1.13
LINC00393-202ENST00000452852 GPAT2Q6NUI2 795 aa7.97□□□□□ -1.13
LINC00393-202ENST00000452852 INSM2Q96T92 566 aaPredicted RBP7.97□□□□□ -1.13
LINC00393-202ENST00000452852 OSBPL3Q9H4L5 887 aa7.97□□□□□ -1.13
LINC00393-202ENST00000452852 TTLL8A6PVC2 850 aa7.96□□□□□ -1.14
LINC00393-202ENST00000452852 ATP5J2-PTCD1G3V325 749 aa7.96□□□□□ -1.14
LINC00393-202ENST00000452852 TRAK2O60296 914 aa7.96□□□□□ -1.14
LINC00393-202ENST00000452852 MAN1A2O60476 641 aa7.96□□□□□ -1.14
LINC00393-202ENST00000452852 CTSOP43234 321 aaPredicted RBP7.96□□□□□ -1.14
LINC00393-202ENST00000452852 PLPP7Q8NBV4 271 aa7.96□□□□□ -1.14
LINC00393-202ENST00000452852 ESF1Q9H501 851 aaKnown RBP7.96□□□□□ -1.14
LINC00393-202ENST00000452852 FIGNL2A6NMB9 653 aa7.95□□□□□ -1.14
LINC00393-202ENST00000452852 MYCP01106 439 aaPredicted RBP7.95□□□□□ -1.14
LINC00393-202ENST00000452852 OXLD1Q5BKU9 147 aa7.95□□□□□ -1.14
LINC00393-202ENST00000452852 DNMT3LQ9UJW3 386 aa7.95□□□□□ -1.14
LINC00393-202ENST00000452852 USP4Q13107 963 aa7.94□□□□□ -1.14
LINC00393-202ENST00000452852 CYP2U1Q7Z449 544 aa7.94□□□□□ -1.14
LINC00393-202ENST00000452852 POLMQ9NP87 494 aaPredicted RBP7.94□□□□□ -1.14
LINC00393-202ENST00000452852 A0A1W2PRU2 124 aa7.93□□□□□ -1.14
LINC00393-202ENST00000452852 SKIP12755 728 aa7.93□□□□□ -1.14
LINC00393-202ENST00000452852 MAP7D1Q3KQU3 841 aa7.93□□□□□ -1.14
LINC00393-202ENST00000452852 MEN1O00255 615 aa7.92□□□□□ -1.14
LINC00393-202ENST00000452852 VSIG8P0DPA2 414 aa7.92□□□□□ -1.14
LINC00393-202ENST00000452852 GLMNQ92990 594 aa7.92□□□□□ -1.14
LINC00393-202ENST00000452852 UCN2Q96RP3 112 aa7.92□□□□□ -1.14
LINC00393-202ENST00000452852 FOXD4L5Q5VV16 416 aaPredicted RBP7.91□□□□□ -1.14
LINC00393-202ENST00000452852 NFATC2IPQ8NCF5 419 aa7.91□□□□□ -1.14
LINC00393-202ENST00000452852 RNF217Q8TC41 542 aa7.91□□□□□ -1.14
LINC00393-202ENST00000452852 SIRT1Q96EB6 747 aa7.91□□□□□ -1.14
LINC00393-202ENST00000452852 ARHGEF10LQ9HCE6 1279 aa7.91□□□□□ -1.14
LINC00393-202ENST00000452852 RAB6BQ9NRW1 208 aa7.91□□□□□ -1.14
LINC00393-202ENST00000452852 DNMT3AQ9Y6K1 912 aaPredicted RBP7.91□□□□□ -1.14
LINC00393-202ENST00000452852 GNRH1P01148 92 aa7.9□□□□□ -1.14
LINC00393-202ENST00000452852 FOXK2Q01167 660 aa7.9□□□□□ -1.14
LINC00393-202ENST00000452852 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.9□□□□□ -1.14
LINC00393-202ENST00000452852 TBC1D9Q6ZT07 1266 aa7.9□□□□□ -1.14
LINC00393-202ENST00000452852 KRTAP4-8Q9BYQ9 185 aa7.9□□□□□ -1.14
LINC00393-202ENST00000452852 USP17L5A8MUK1 530 aa7.89□□□□□ -1.15
LINC00393-202ENST00000452852 STAU1O95793 577 aaKnown RBP7.89□□□□□ -1.15
LINC00393-202ENST00000452852 RNF144AP50876 292 aaPredicted RBP7.89□□□□□ -1.15
LINC00393-202ENST00000452852 CLN3Q13286 438 aa7.89□□□□□ -1.15
LINC00393-202ENST00000452852 DEPDC4Q8N2C3 294 aa7.89□□□□□ -1.15
LINC00393-202ENST00000452852 CALR3Q96L12 384 aaKnown RBP7.89□□□□□ -1.15
LINC00393-202ENST00000452852 NLRP3Q96P20 1036 aa7.89□□□□□ -1.15
LINC00393-202ENST00000452852 ARID3AQ99856 593 aa7.89□□□□□ -1.15
LINC00393-202ENST00000452852 ZNF777Q9ULD5 760 aaPredicted RBP7.89□□□□□ -1.15
LINC00393-202ENST00000452852 IL2RAP01589 272 aa7.88□□□□□ -1.15
LINC00393-202ENST00000452852 NCOA4Q13772 614 aa7.88□□□□□ -1.15
LINC00393-202ENST00000452852 EML3Q32P44 896 aa7.88□□□□□ -1.15
LINC00393-202ENST00000452852 LZTS3O60299 673 aaPredicted RBP7.87□□□□□ -1.15
LINC00393-202ENST00000452852 GPC1P35052 558 aa7.87□□□□□ -1.15
LINC00393-202ENST00000452852 PTSQ03393 145 aa7.87□□□□□ -1.15
LINC00393-202ENST00000452852 PRICKLE2Q7Z3G6 844 aa7.87□□□□□ -1.15
LINC00393-202ENST00000452852 CNKSR1Q969H4 720 aa7.87□□□□□ -1.15
LINC00393-202ENST00000452852 ADAMTS8Q9UP79 889 aa7.87□□□□□ -1.15
LINC00393-202ENST00000452852 ATP9BO43861 1147 aa7.86□□□□□ -1.15
LINC00393-202ENST00000452852 LYSMD3Q7Z3D4 306 aa7.86□□□□□ -1.15
LINC00393-202ENST00000452852 XAGE2Q96GT9 111 aa7.86□□□□□ -1.15
LINC00393-202ENST00000452852 ESYT1Q9BSJ8 1104 aa7.86□□□□□ -1.15
LINC00393-202ENST00000452852 ETNK1Q9HBU6 452 aa7.86□□□□□ -1.15
LINC00393-202ENST00000452852 PODXL2Q9NZ53 605 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms