RNA–Protein interactions for RNA: ENST00000447715.6

PPFIA4-204, Transcript of PTPRF interacting protein alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPFIA4, Length 6,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-204ENST00000447715 RUNDC1Q96C34 613 aa15.7■□□□□ 0.1
PPFIA4-204ENST00000447715 NOL7Q9UMY1 257 aaKnown RBP15.7■□□□□ 0.1
PPFIA4-204ENST00000447715 CYP46A1Q9Y6A2 500 aa15.7■□□□□ 0.1
PPFIA4-204ENST00000447715 SRRTQ9BXP5 876 aaKnown RBP15.69■□□□□ 0.1
PPFIA4-204ENST00000447715 PIP4K2BP78356 416 aa15.69■□□□□ 0.1
PPFIA4-204ENST00000447715 UPF3BQ9BZI7 483 aaKnown RBP15.69■□□□□ 0.1
PPFIA4-204ENST00000447715 GRPEL1Q9HAV7 217 aa15.69■□□□□ 0.1
PPFIA4-204ENST00000447715 RAI14Q9P0K7 980 aa15.69■□□□□ 0.1
PPFIA4-204ENST00000447715 ZSCAN29Q8IWY8 852 aaPredicted RBP15.69■□□□□ 0.1
PPFIA4-204ENST00000447715 CEP57L1Q8IYX8 460 aa15.69■□□□□ 0.1
PPFIA4-204ENST00000447715 DHX57Q6P158 1386 aaKnown RBP15.68■□□□□ 0.1
PPFIA4-204ENST00000447715 NCOA2Q15596 1464 aa15.68■□□□□ 0.1
PPFIA4-204ENST00000447715 HECW1Q76N89 1606 aa15.68■□□□□ 0.1
PPFIA4-204ENST00000447715 POTEJP0CG39 1038 aa15.68■□□□□ 0.1
PPFIA4-204ENST00000447715 LARP1BQ659C4 914 aaKnown RBP15.68■□□□□ 0.1
PPFIA4-204ENST00000447715 DHX8Q14562 1220 aaKnown RBP15.68■□□□□ 0.1
PPFIA4-204ENST00000447715 CCDC57Q2TAC2 916 aa15.68■□□□□ 0.1
PPFIA4-204ENST00000447715 CFAP100Q494V2 611 aa15.68■□□□□ 0.1
PPFIA4-204ENST00000447715 SPATA32Q96LK8 384 aa15.68■□□□□ 0.1
PPFIA4-204ENST00000447715 CAMK4Q16566 473 aa15.68■□□□□ 0.1
PPFIA4-204ENST00000447715 SCLT1Q96NL6 688 aa15.68■□□□□ 0.1
PPFIA4-204ENST00000447715 SPINK5Q9NQ38 1064 aaPredicted RBP15.68■□□□□ 0.1
PPFIA4-204ENST00000447715 CETN2P41208 172 aa15.67■□□□□ 0.1
PPFIA4-204ENST00000447715 LUZP1Q86V48 1076 aa15.67■□□□□ 0.1
PPFIA4-204ENST00000447715 KRT85P78386 507 aa15.67■□□□□ 0.1
PPFIA4-204ENST00000447715 CASQ1P31415 396 aa15.67■□□□□ 0.1
PPFIA4-204ENST00000447715 HIP1O00291 1037 aa15.67■□□□□ 0.1
PPFIA4-204ENST00000447715 ZNF397Q8NF99 534 aaPredicted RBP15.67■□□□□ 0.1
PPFIA4-204ENST00000447715 POLA1P09884 1462 aaPredicted RBP15.66■□□□□ 0.1
PPFIA4-204ENST00000447715 PRKRIP1Q9H875 184 aaPredicted RBP15.66■□□□□ 0.1
PPFIA4-204ENST00000447715 LAMC3Q9Y6N6 1575 aa15.66■□□□□ 0.1
PPFIA4-204ENST00000447715 BMS1Q14692 1282 aaKnown RBP15.66■□□□□ 0.1
PPFIA4-204ENST00000447715 LARP1Q6PKG0 1096 aaKnown RBP15.66■□□□□ 0.1
PPFIA4-204ENST00000447715 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.66■□□□□ 0.13e-7■■■■□ 23.9
PPFIA4-204ENST00000447715 GNL3LQ9NVN8 582 aaKnown RBP15.66■□□□□ 0.1
PPFIA4-204ENST00000447715 SPA17Q15506 151 aa15.66■□□□□ 0.1
PPFIA4-204ENST00000447715 EHBP1L1Q8N3D4 1523 aa15.66■□□□□ 0.1
PPFIA4-204ENST00000447715 UBA5Q9GZZ9 404 aa15.65■□□□□ 0.1
PPFIA4-204ENST00000447715 ATP2C2O75185 946 aa15.65■□□□□ 0.1
PPFIA4-204ENST00000447715 CGNQ9P2M7 1197 aaKnown RBP15.65■□□□□ 0.1
PPFIA4-204ENST00000447715 MCM2P49736 904 aa15.65■□□□□ 0.1
PPFIA4-204ENST00000447715 HOOK3Q86VS8 718 aa15.65■□□□□ 0.1
PPFIA4-204ENST00000447715 SPDYE4A6NLX3 237 aa15.65■□□□□ 0.1
PPFIA4-204ENST00000447715 TRIM21P19474 475 aaKnown RBP15.65■□□□□ 0.1
PPFIA4-204ENST00000447715 NUP62CLQ9H1M0 184 aa15.65■□□□□ 0.1
PPFIA4-204ENST00000447715 MYCNP04198 464 aaPredicted RBP15.64■□□□□ 0.1
PPFIA4-204ENST00000447715 PDZRN3Q9UPQ7 1066 aa15.64■□□□□ 0.1
PPFIA4-204ENST00000447715 NACAP1Q9BZK3 213 aa15.64■□□□□ 0.09
PPFIA4-204ENST00000447715 KLHL10Q6JEL2 608 aa15.64■□□□□ 0.09
PPFIA4-204ENST00000447715 GCOM1H8Y6P7 765 aaPredicted RBP15.64■□□□□ 0.09
PPFIA4-204ENST00000447715 URI1O94763 535 aaPredicted RBP15.64■□□□□ 0.09
PPFIA4-204ENST00000447715 MYZAPP0CAP1 466 aa15.64■□□□□ 0.09
PPFIA4-204ENST00000447715 FKBP4Q02790 459 aaKnown RBP eCLIP15.64■□□□□ 0.09
PPFIA4-204ENST00000447715 GTF2F1P35269 517 aaKnown RBP eCLIP15.64■□□□□ 0.092e-6■■■□□ 14.6
PPFIA4-204ENST00000447715 CCDC175P0C221 793 aa15.63■□□□□ 0.09
PPFIA4-204ENST00000447715 SPECC1Q5M775 1068 aa15.63■□□□□ 0.09
PPFIA4-204ENST00000447715 APBB1IPQ7Z5R6 666 aaPredicted RBP15.63■□□□□ 0.09
PPFIA4-204ENST00000447715 WDR33Q9C0J8 1336 aaKnown RBP15.63■□□□□ 0.09
PPFIA4-204ENST00000447715 HOMER2Q9NSB8 354 aa15.63■□□□□ 0.09
PPFIA4-204ENST00000447715 KIF4BQ2VIQ3 1234 aa15.63■□□□□ 0.09
PPFIA4-204ENST00000447715 GBP3Q9H0R5 595 aa15.63■□□□□ 0.09
PPFIA4-204ENST00000447715 SMTNL1A8MU46 457 aa15.62■□□□□ 0.09
PPFIA4-204ENST00000447715 CCDC160A6NGH7 325 aa15.62■□□□□ 0.09
PPFIA4-204ENST00000447715 LIG1P18858 919 aa15.62■□□□□ 0.09
PPFIA4-204ENST00000447715 CTNNA2P26232 953 aa15.62■□□□□ 0.09
PPFIA4-204ENST00000447715 DDX11Q96FC9 970 aa15.62■□□□□ 0.09
PPFIA4-204ENST00000447715 CFAP57Q96MR6 1250 aa15.62■□□□□ 0.09
PPFIA4-204ENST00000447715 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.62■□□□□ 0.09
PPFIA4-204ENST00000447715 FAM107BQ9H098 131 aa15.62■□□□□ 0.09
PPFIA4-204ENST00000447715 CACNA2D4Q7Z3S7 1137 aa15.62■□□□□ 0.09
PPFIA4-204ENST00000447715 DRC1Q96MC2 740 aa15.62■□□□□ 0.09
PPFIA4-204ENST00000447715 USP47Q96K76 1375 aa15.62■□□□□ 0.09
PPFIA4-204ENST00000447715 ANKRD18BA2A2Z9 1011 aa15.61■□□□□ 0.09
PPFIA4-204ENST00000447715 CCDC30Q5VVM6 783 aa15.61■□□□□ 0.09
PPFIA4-204ENST00000447715 ZNF644Q9H582 1327 aaPredicted RBP15.61■□□□□ 0.09
PPFIA4-204ENST00000447715 CCDC96Q2M329 555 aa15.61■□□□□ 0.09
PPFIA4-204ENST00000447715 GGNBP2Q9H3C7 697 aa15.61■□□□□ 0.09
PPFIA4-204ENST00000447715 GNAI3P08754 354 aa15.61■□□□□ 0.09
PPFIA4-204ENST00000447715 TDO2P48775 406 aa15.61■□□□□ 0.09
PPFIA4-204ENST00000447715 ANKRD1Q15327 319 aa15.61■□□□□ 0.09
PPFIA4-204ENST00000447715 SF3B2Q13435 895 aaKnown RBP15.61■□□□□ 0.09
PPFIA4-204ENST00000447715 MAP9Q49MG5 647 aa15.61■□□□□ 0.09
PPFIA4-204ENST00000447715 MICALCLQ6ZW33 695 aa15.61■□□□□ 0.09
PPFIA4-204ENST00000447715 PTPN14Q15678 1187 aa15.6■□□□□ 0.09
PPFIA4-204ENST00000447715 IMMTQ16891 758 aaKnown RBP15.6■□□□□ 0.09
PPFIA4-204ENST00000447715 FERP16591 822 aa15.6■□□□□ 0.09
PPFIA4-204ENST00000447715 HLTFQ14527 1009 aaKnown RBP eCLIP15.6■□□□□ 0.09
PPFIA4-204ENST00000447715 KIF5CO60282 957 aa15.6■□□□□ 0.09
PPFIA4-204ENST00000447715 UBAC1Q9BSL1 405 aa15.6■□□□□ 0.09
PPFIA4-204ENST00000447715 WASHC2AQ641Q2 1341 aa15.6■□□□□ 0.09
PPFIA4-204ENST00000447715 CPLX3Q8WVH0 158 aa15.6■□□□□ 0.09
PPFIA4-204ENST00000447715 PDRG1Q9NUG6 133 aa15.6■□□□□ 0.09
PPFIA4-204ENST00000447715 PLEKHH2Q8IVE3 1493 aa15.6■□□□□ 0.09
PPFIA4-204ENST00000447715 ZWINTO95229 277 aa15.6■□□□□ 0.09
PPFIA4-204ENST00000447715 PPP1R12BO60237 982 aaPredicted RBP15.59■□□□□ 0.09
PPFIA4-204ENST00000447715 RRP9O43818 475 aaKnown RBP15.59■□□□□ 0.09
PPFIA4-204ENST00000447715 BICRAQ9NZM4 1560 aa15.59■□□□□ 0.09
PPFIA4-204ENST00000447715 K7ELQ4 463 aaPredicted RBP15.59■□□□□ 0.09
PPFIA4-204ENST00000447715 JAKMIP1Q96N16 626 aaKnown RBP15.59■□□□□ 0.09
PPFIA4-204ENST00000447715 ANKRD50Q9ULJ7 1429 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms