RNA–Protein interactions for RNA: ENST00000446488.7

NFRKB-201, Transcript of nuclear factor related to kappaB binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NFRKB, Length 5,093 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-201ENST00000446488 RAI14Q9P0K7 980 aa13.16□□□□□ -0.3
NFRKB-201ENST00000446488 UGGT2Q9NYU1 1516 aa13.16□□□□□ -0.3
NFRKB-201ENST00000446488 CDCA7Q9BWT1 371 aaPredicted RBP13.16□□□□□ -0.3
NFRKB-201ENST00000446488 NUP160Q12769 1436 aa13.16□□□□□ -0.3
NFRKB-201ENST00000446488 GPS2Q13227 327 aa13.16□□□□□ -0.3
NFRKB-201ENST00000446488 TRMT112Q9UI30 125 aaKnown RBP13.16□□□□□ -0.3
NFRKB-201ENST00000446488 SLF2Q8IX21 1173 aa13.16□□□□□ -0.3
NFRKB-201ENST00000446488 THOC2Q8NI27 1593 aaKnown RBP13.16□□□□□ -0.3
NFRKB-201ENST00000446488 PPP1R42Q7Z4L9 355 aa13.15□□□□□ -0.3
NFRKB-201ENST00000446488 PANK1Q8TE04 598 aa13.15□□□□□ -0.3
NFRKB-201ENST00000446488 TPM3P06753 285 aa13.15□□□□□ -0.3
NFRKB-201ENST00000446488 KCNA6P17658 529 aa13.15□□□□□ -0.3
NFRKB-201ENST00000446488 C16orf71Q8IYS4 520 aaPredicted RBP13.15□□□□□ -0.3
NFRKB-201ENST00000446488 CDCA7LQ96GN5 454 aa13.15□□□□□ -0.3
NFRKB-201ENST00000446488 ZNF287Q9HBT7 754 aa13.15□□□□□ -0.3
NFRKB-201ENST00000446488 AKAP2Q9Y2D5 859 aa13.15□□□□□ -0.3
NFRKB-201ENST00000446488 FOXD4L6Q3SYB3 417 aaPredicted RBP13.15□□□□□ -0.3
NFRKB-201ENST00000446488 FOXD4L3Q6VB84 417 aaPredicted RBP13.15□□□□□ -0.3
NFRKB-201ENST00000446488 ZNF622Q969S3 477 aaKnown RBP eCLIP13.15□□□□□ -0.34e-7■■□□□ 13.5
NFRKB-201ENST00000446488 LRP2BPQ9P2M1 347 aa13.15□□□□□ -0.3
NFRKB-201ENST00000446488 NOC3LQ8WTT2 800 aaKnown RBP13.14□□□□□ -0.31
NFRKB-201ENST00000446488 PDE3AQ14432 1141 aa13.14□□□□□ -0.31
NFRKB-201ENST00000446488 METTL24Q5JXM2 366 aa13.14□□□□□ -0.31
NFRKB-201ENST00000446488 TEX35Q5T0J7 233 aa13.14□□□□□ -0.31
NFRKB-201ENST00000446488 NSD2O96028 1365 aa13.14□□□□□ -0.31
NFRKB-201ENST00000446488 RRP12Q5JTH9 1297 aaKnown RBP13.14□□□□□ -0.31
NFRKB-201ENST00000446488 DDX46Q7L014 1031 aaKnown RBP13.14□□□□□ -0.31
NFRKB-201ENST00000446488 ANKRD20A12PQ8NF67 263 aa13.14□□□□□ -0.31
NFRKB-201ENST00000446488 SIL1Q9H173 461 aa13.14□□□□□ -0.31
NFRKB-201ENST00000446488 TMEM132AQ24JP5 1023 aa13.13□□□□□ -0.31
NFRKB-201ENST00000446488 LNPKQ9C0E8 428 aa13.13□□□□□ -0.31
NFRKB-201ENST00000446488 NUP153P49790 1475 aaKnown RBP13.13□□□□□ -0.31
NFRKB-201ENST00000446488 SCAF11Q99590 1463 aaKnown RBP13.13□□□□□ -0.31
NFRKB-201ENST00000446488 PRKCSHP14314 528 aaPredicted RBP13.13□□□□□ -0.31
NFRKB-201ENST00000446488 CDC45O75419 566 aa13.13□□□□□ -0.31
NFRKB-201ENST00000446488 ZNF592Q92610 1267 aa13.13□□□□□ -0.31
NFRKB-201ENST00000446488 STK32BQ9NY57 414 aa13.13□□□□□ -0.31
NFRKB-201ENST00000446488 TPM1P09493 284 aa13.13□□□□□ -0.31
NFRKB-201ENST00000446488 HYPKQ9NX55 129 aa13.13□□□□□ -0.31
NFRKB-201ENST00000446488 C6orf229H3BNL8 230 aa13.12□□□□□ -0.31
NFRKB-201ENST00000446488 CDC5LQ99459 802 aaKnown RBP13.12□□□□□ -0.31
NFRKB-201ENST00000446488 ZNF219Q9P2Y4 722 aaPredicted RBP13.12□□□□□ -0.31
NFRKB-201ENST00000446488 IL2RBP14784 551 aa13.12□□□□□ -0.31
NFRKB-201ENST00000446488 TSR2Q969E8 191 aaKnown RBP13.12□□□□□ -0.31
NFRKB-201ENST00000446488 SYCP2Q9BX26 1530 aa13.12□□□□□ -0.31
NFRKB-201ENST00000446488 TRAPPC8Q9Y2L5 1435 aa13.12□□□□□ -0.31
NFRKB-201ENST00000446488 KIAA0556O60303 1618 aa13.12□□□□□ -0.31
NFRKB-201ENST00000446488 KIF21AQ7Z4S6 1674 aa13.12□□□□□ -0.31
NFRKB-201ENST00000446488 WDR97A6NE52 1622 aa13.12□□□□□ -0.31
NFRKB-201ENST00000446488 RRP9O43818 475 aaKnown RBP13.12□□□□□ -0.31
NFRKB-201ENST00000446488 MBD3O95983 291 aa13.12□□□□□ -0.31
NFRKB-201ENST00000446488 IFIT5Q13325 482 aaKnown RBP13.12□□□□□ -0.31
NFRKB-201ENST00000446488 TFCP2L1Q9NZI6 479 aa13.12□□□□□ -0.31
NFRKB-201ENST00000446488 EMILIN1Q9Y6C2 1016 aa13.11□□□□□ -0.31
NFRKB-201ENST00000446488 CRACR2BQ8N4Y2 399 aaPredicted RBP13.11□□□□□ -0.31
NFRKB-201ENST00000446488 SETQ01105 290 aaPredicted RBP13.11□□□□□ -0.31
NFRKB-201ENST00000446488 DUSP27Q5VZP5 1158 aa13.11□□□□□ -0.31
NFRKB-201ENST00000446488 HMGN5P82970 282 aaKnown RBP13.11□□□□□ -0.31
NFRKB-201ENST00000446488 NBPF6Q5VWK0 638 aa13.11□□□□□ -0.31
NFRKB-201ENST00000446488 NBPF5PQ86XG9 351 aaPredicted RBP13.11□□□□□ -0.31
NFRKB-201ENST00000446488 NBPF4Q96M43 638 aa13.11□□□□□ -0.31
NFRKB-201ENST00000446488 TMPOP42166 694 aaKnown RBP13.1□□□□□ -0.31
NFRKB-201ENST00000446488 FKBP4Q02790 459 aaKnown RBP eCLIP13.1□□□□□ -0.31
NFRKB-201ENST00000446488 GCC1Q96CN9 775 aa13.1□□□□□ -0.31
NFRKB-201ENST00000446488 DBF4Q9UBU7 674 aaPredicted RBP13.1□□□□□ -0.31
NFRKB-201ENST00000446488 PDZRN3Q9UPQ7 1066 aa13.1□□□□□ -0.31
NFRKB-201ENST00000446488 SRGAP3O43295 1099 aa13.1□□□□□ -0.31
NFRKB-201ENST00000446488 ANKRD18BA2A2Z9 1011 aa13.1□□□□□ -0.31
NFRKB-201ENST00000446488 ATF7IPQ6VMQ6 1270 aa13.1□□□□□ -0.31
NFRKB-201ENST00000446488 CCDC85AQ96PX6 553 aaPredicted RBP13.1□□□□□ -0.31
NFRKB-201ENST00000446488 C11orf95C9JLR9 678 aaPredicted RBP13.1□□□□□ -0.31
NFRKB-201ENST00000446488 MPHOSPH10O00566 681 aaKnown RBP13.1□□□□□ -0.31
NFRKB-201ENST00000446488 ATP6V1AP38606 617 aa13.1□□□□□ -0.31
NFRKB-201ENST00000446488 MCM10Q7L590 875 aa13.1□□□□□ -0.31
NFRKB-201ENST00000446488 LRRCC1Q9C099 1032 aa13.1□□□□□ -0.31
NFRKB-201ENST00000446488 NOB1Q9ULX3 412 aaKnown RBP13.1□□□□□ -0.31
NFRKB-201ENST00000446488 SMC3Q9UQE7 1217 aa13.1□□□□□ -0.31
NFRKB-201ENST00000446488 ITSN2Q9NZM3 1697 aa13.1□□□□□ -0.31
NFRKB-201ENST00000446488 GRPEL1Q9HAV7 217 aa13.09□□□□□ -0.31
NFRKB-201ENST00000446488 ABCF2Q9UG63 623 aa13.09□□□□□ -0.31
NFRKB-201ENST00000446488 A0A0U1RQG5 324 aaPredicted RBP13.09□□□□□ -0.31
NFRKB-201ENST00000446488 MYO1BO43795 1136 aa13.09□□□□□ -0.31
NFRKB-201ENST00000446488 ACSBG1Q96GR2 724 aa13.09□□□□□ -0.31
NFRKB-201ENST00000446488 MYD88Q99836 296 aa13.09□□□□□ -0.31
NFRKB-201ENST00000446488 PARP3Q9Y6F1 533 aa13.09□□□□□ -0.31
NFRKB-201ENST00000446488 LETM1O95202 739 aaPredicted RBP13.09□□□□□ -0.31
NFRKB-201ENST00000446488 BAG6P46379 1132 aa13.09□□□□□ -0.31
NFRKB-201ENST00000446488 SOGA3Q5TF21 947 aa13.09□□□□□ -0.31
NFRKB-201ENST00000446488 IFT57Q9NWB7 429 aa13.09□□□□□ -0.31
NFRKB-201ENST00000446488 ABCC11Q96J66 1382 aa13.09□□□□□ -0.31
NFRKB-201ENST00000446488 SNRPA1P09661 255 aaKnown RBP13.09□□□□□ -0.31
NFRKB-201ENST00000446488 SLC5A1P13866 664 aa13.09□□□□□ -0.31
NFRKB-201ENST00000446488 TDO2P48775 406 aa13.09□□□□□ -0.31
NFRKB-201ENST00000446488 NEO1Q92859 1461 aa13.08□□□□□ -0.31
NFRKB-201ENST00000446488 DZIP1Q86YF9 867 aaKnown RBP13.08□□□□□ -0.31
NFRKB-201ENST00000446488 SETDB2Q96T68 719 aa13.08□□□□□ -0.31
NFRKB-201ENST00000446488 CTNNA3Q9UI47 895 aa13.08□□□□□ -0.31
NFRKB-201ENST00000446488 CAVIN1Q6NZI2 390 aaKnown RBP13.08□□□□□ -0.32
NFRKB-201ENST00000446488 ARGLU1Q9NWB6 273 aaPredicted RBP13.07□□□□□ -0.32
NFRKB-201ENST00000446488 AACSQ86V21 672 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms