RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 OCLNQ16625 522 aa9.42□□□□□ -0.9
SPEN-202ENST00000438066 SIX5Q8N196 739 aa9.42□□□□□ -0.9
SPEN-202ENST00000438066 CCDC85AQ96PX6 553 aaPredicted RBP9.42□□□□□ -0.9
SPEN-202ENST00000438066 CXXC1Q9P0U4 656 aaPredicted RBP9.42□□□□□ -0.9
SPEN-202ENST00000438066 RBM19Q9Y4C8 960 aaKnown RBP9.42□□□□□ -0.9
SPEN-202ENST00000438066 ABCA5Q8WWZ7 1642 aa9.42□□□□□ -0.9
SPEN-202ENST00000438066 RAD54L2Q9Y4B4 1467 aa9.42□□□□□ -0.9
SPEN-202ENST00000438066 TCF3P15923 654 aa9.42□□□□□ -0.9
SPEN-202ENST00000438066 ZNF326Q5BKZ1 582 aaKnown RBP9.42□□□□□ -0.9
SPEN-202ENST00000438066 DZIP3Q86Y13 1208 aaKnown RBP9.42□□□□□ -0.9
SPEN-202ENST00000438066 PCGF6Q9BYE7 350 aa9.42□□□□□ -0.9
SPEN-202ENST00000438066 PRDM9Q9NQV7 894 aa9.42□□□□□ -0.9
SPEN-202ENST00000438066 CLIP1P30622 1438 aa9.41□□□□□ -0.9
SPEN-202ENST00000438066 IGF1RP08069 1367 aa9.41□□□□□ -0.9
SPEN-202ENST00000438066 SFI1A8K8P3 1242 aa9.41□□□□□ -0.9
SPEN-202ENST00000438066 DXOO77932 396 aaKnown RBP9.41□□□□□ -0.9
SPEN-202ENST00000438066 CCDC102BQ68D86 513 aa9.41□□□□□ -0.9
SPEN-202ENST00000438066 TAS1R3Q7RTX0 852 aa9.41□□□□□ -0.9
SPEN-202ENST00000438066 GLYCTKQ8IVS8 523 aa9.41□□□□□ -0.9
SPEN-202ENST00000438066 FAM160A2Q8N612 972 aaPredicted RBP9.41□□□□□ -0.9
SPEN-202ENST00000438066 TPCN2Q8NHX9 752 aa9.41□□□□□ -0.9
SPEN-202ENST00000438066 CARD14Q9BXL6 1004 aa9.41□□□□□ -0.9
SPEN-202ENST00000438066 HPS5Q9UPZ3 1129 aa9.41□□□□□ -0.9
SPEN-202ENST00000438066 EGFL7Q9UHF1 273 aa9.4□□□□□ -0.9
SPEN-202ENST00000438066 CUL7Q14999 1698 aa9.4□□□□□ -0.9
SPEN-202ENST00000438066 TARBP1Q13395 1621 aaKnown RBP9.4□□□□□ -0.9
SPEN-202ENST00000438066 MAGEB6P1A0A0J9YX57 407 aa9.39□□□□□ -0.91
SPEN-202ENST00000438066 TAGLNQ01995 201 aaKnown RBP9.39□□□□□ -0.91
SPEN-202ENST00000438066 PSME1Q06323 249 aa9.39□□□□□ -0.91
SPEN-202ENST00000438066 MSS51Q4VC12 460 aa9.39□□□□□ -0.91
SPEN-202ENST00000438066 SPSB2Q99619 263 aa9.39□□□□□ -0.91
SPEN-202ENST00000438066 ICMTO60725 284 aa9.39□□□□□ -0.91
SPEN-202ENST00000438066 MAPK1P28482 360 aa9.39□□□□□ -0.91
SPEN-202ENST00000438066 BCAMP50895 628 aa9.39□□□□□ -0.91
SPEN-202ENST00000438066 MKNK1Q9BUB5 465 aa9.39□□□□□ -0.91
SPEN-202ENST00000438066 MRC2Q9UBG0 1479 aa9.39□□□□□ -0.91
SPEN-202ENST00000438066 GIGYF1O75420 1035 aaPredicted RBP9.38□□□□□ -0.91
SPEN-202ENST00000438066 SH3BP5LQ7L8J4 393 aa9.38□□□□□ -0.91
SPEN-202ENST00000438066 ANKK1Q8NFD2 765 aa9.38□□□□□ -0.91
SPEN-202ENST00000438066 HINFPQ9BQA5 517 aa9.38□□□□□ -0.91
SPEN-202ENST00000438066 SEPT3Q9UH03 358 aa9.38□□□□□ -0.91
SPEN-202ENST00000438066 TK2O00142 265 aa9.37□□□□□ -0.91
SPEN-202ENST00000438066 MMP16P51512 607 aa9.37□□□□□ -0.91
SPEN-202ENST00000438066 ZNF687Q8N1G0 1237 aa9.37□□□□□ -0.91
SPEN-202ENST00000438066 GTF3C2Q8WUA4 911 aaPredicted RBP9.37□□□□□ -0.91
SPEN-202ENST00000438066 UNC93B1Q9H1C4 597 aa9.37□□□□□ -0.91
SPEN-202ENST00000438066 WDR62O43379 1518 aa9.37□□□□□ -0.91
SPEN-202ENST00000438066 SOWAHBA6NEL2 793 aa9.36□□□□□ -0.91
SPEN-202ENST00000438066 MTMR3Q13615 1198 aa9.36□□□□□ -0.91
SPEN-202ENST00000438066 VPS8Q8N3P4 1428 aa9.36□□□□□ -0.91
SPEN-202ENST00000438066 FBXO33Q7Z6M2 555 aa9.36□□□□□ -0.91
SPEN-202ENST00000438066 CCDC24Q8N4L8 307 aa9.36□□□□□ -0.91
SPEN-202ENST00000438066 TSR3Q9UJK0 312 aaKnown RBP9.36□□□□□ -0.91
SPEN-202ENST00000438066 CARMIL1Q5VZK9 1371 aa9.36□□□□□ -0.91
SPEN-202ENST00000438066 GOLGA8CPA6NN73 597 aa9.35□□□□□ -0.91
SPEN-202ENST00000438066 C21orf2O43822 256 aa9.35□□□□□ -0.91
SPEN-202ENST00000438066 PTCRAQ6ISU1 281 aaPredicted RBP9.35□□□□□ -0.91
SPEN-202ENST00000438066 ADGRD1Q6QNK2 874 aa9.35□□□□□ -0.91
SPEN-202ENST00000438066 PCDHGA11Q9Y5H2 935 aa9.35□□□□□ -0.91
SPEN-202ENST00000438066 ARAP1Q96P48 1450 aa9.35□□□□□ -0.91
SPEN-202ENST00000438066 COPS2P61201 443 aa9.34□□□□□ -0.91
SPEN-202ENST00000438066 CAPN12Q6ZSI9 719 aa9.34□□□□□ -0.91
SPEN-202ENST00000438066 DNMT3AQ9Y6K1 912 aaPredicted RBP9.34□□□□□ -0.91
SPEN-202ENST00000438066 EMP3P54852 163 aa9.34□□□□□ -0.92
SPEN-202ENST00000438066 ASB16Q96NS5 453 aa9.34□□□□□ -0.92
SPEN-202ENST00000438066 DCTN4Q9UJW0 460 aa9.34□□□□□ -0.92
SPEN-202ENST00000438066 THOC2Q8NI27 1593 aaKnown RBP9.33□□□□□ -0.92
SPEN-202ENST00000438066 PBRM1Q86U86 1689 aa9.33□□□□□ -0.92
SPEN-202ENST00000438066 CTTNBP2Q8WZ74 1663 aa9.33□□□□□ -0.92
SPEN-202ENST00000438066 AGERQ15109 404 aa9.33□□□□□ -0.92
SPEN-202ENST00000438066 ECM1Q16610 540 aa9.33□□□□□ -0.92
SPEN-202ENST00000438066 TSEN2Q8NCE0 465 aaKnown RBP9.33□□□□□ -0.92
SPEN-202ENST00000438066 MARVELD3Q96A59 401 aa9.33□□□□□ -0.92
SPEN-202ENST00000438066 GAPVD1Q14C86 1478 aa9.32□□□□□ -0.92
SPEN-202ENST00000438066 FAM205CA6NFA0 338 aa9.32□□□□□ -0.92
SPEN-202ENST00000438066 FKBP4Q02790 459 aaKnown RBP eCLIP9.32□□□□□ -0.92
SPEN-202ENST00000438066 SH3RF1Q7Z6J0 888 aa9.32□□□□□ -0.92
SPEN-202ENST00000438066 GAS2L2Q8NHY3 880 aa9.32□□□□□ -0.92
SPEN-202ENST00000438066 ARHGAP35Q9NRY4 1499 aa9.32□□□□□ -0.92
SPEN-202ENST00000438066 VAMP1P23763 118 aa9.31□□□□□ -0.92
SPEN-202ENST00000438066 ARHGAP4P98171 946 aa9.31□□□□□ -0.92
SPEN-202ENST00000438066 USP4Q13107 963 aa9.31□□□□□ -0.92
SPEN-202ENST00000438066 FKBP5Q13451 457 aaPredicted RBP9.31□□□□□ -0.92
SPEN-202ENST00000438066 ERFEQ4G0M1 354 aa9.31□□□□□ -0.92
SPEN-202ENST00000438066 RNF20Q5VTR2 975 aa9.31□□□□□ -0.92
SPEN-202ENST00000438066 ZSCAN29Q8IWY8 852 aaPredicted RBP9.31□□□□□ -0.92
SPEN-202ENST00000438066 PURBQ96QR8 312 aaKnown RBP9.31□□□□□ -0.92
SPEN-202ENST00000438066 PCDHB11Q9Y5F2 797 aa9.31□□□□□ -0.92
SPEN-202ENST00000438066 RECKO95980 971 aa9.31□□□□□ -0.92
SPEN-202ENST00000438066 HRO43593 1189 aa9.3□□□□□ -0.92
SPEN-202ENST00000438066 TLL1O43897 1013 aa9.3□□□□□ -0.92
SPEN-202ENST00000438066 WEE1P30291 646 aa9.3□□□□□ -0.92
SPEN-202ENST00000438066 SLC10A4Q96EP9 437 aa9.3□□□□□ -0.92
SPEN-202ENST00000438066 STAC3Q96MF2 364 aa9.3□□□□□ -0.92
SPEN-202ENST00000438066 TDRD9Q8NDG6 1382 aaKnown RBP9.29□□□□□ -0.92
SPEN-202ENST00000438066 SF3B2Q13435 895 aaKnown RBP9.29□□□□□ -0.92
SPEN-202ENST00000438066 NAA30Q147X3 362 aaPredicted RBP9.29□□□□□ -0.92
SPEN-202ENST00000438066 TSNAXIP1Q2TAA8 658 aa9.29□□□□□ -0.92
SPEN-202ENST00000438066 BAP1Q92560 729 aa9.29□□□□□ -0.92
SPEN-202ENST00000438066 FOXJ1Q92949 421 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms