RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.71□□□□□ -1.02
ECHDC1-208ENST00000436638 MAP2K5Q13163 448 aa8.71□□□□□ -1.02
ECHDC1-208ENST00000436638 SLF2Q8IX21 1173 aa8.71□□□□□ -1.02
ECHDC1-208ENST00000436638 SLC26A8Q96RN1 970 aa8.71□□□□□ -1.02
ECHDC1-208ENST00000436638 PPLO60437 1756 aa8.71□□□□□ -1.02
ECHDC1-208ENST00000436638 MED14O60244 1454 aa8.7□□□□□ -1.02
ECHDC1-208ENST00000436638 MYOM2P54296 1465 aa8.7□□□□□ -1.02
ECHDC1-208ENST00000436638 IRF6O14896 467 aa8.7□□□□□ -1.02
ECHDC1-208ENST00000436638 PDIA4P13667 645 aaKnown RBP8.7□□□□□ -1.02
ECHDC1-208ENST00000436638 TMEM134Q9H6X4 195 aa8.7□□□□□ -1.02
ECHDC1-208ENST00000436638 TBX22Q9Y458 520 aa8.7□□□□□ -1.02
ECHDC1-208ENST00000436638 IQGAP1P46940 1657 aa8.69□□□□□ -1.02
ECHDC1-208ENST00000436638 NLRP7Q8WX94 980 aa8.69□□□□□ -1.02
ECHDC1-208ENST00000436638 MINK1Q8N4C8 1332 aaPredicted RBP8.69□□□□□ -1.02
ECHDC1-208ENST00000436638 IFT172Q9UG01 1749 aa8.68□□□□□ -1.02
ECHDC1-208ENST00000436638 STRCQ7RTU9 1775 aa8.68□□□□□ -1.02
ECHDC1-208ENST00000436638 CFAP70Q5T0N1 1121 aa8.68□□□□□ -1.02
ECHDC1-208ENST00000436638 C14orf93Q9H972 538 aaKnown RBP8.68□□□□□ -1.02
ECHDC1-208ENST00000436638 PIK3C2GO75747 1445 aa8.67□□□□□ -1.02
ECHDC1-208ENST00000436638 ZMYND10O75800 440 aa8.67□□□□□ -1.02
ECHDC1-208ENST00000436638 DIP2AQ14689 1571 aa8.67□□□□□ -1.02
ECHDC1-208ENST00000436638 NYAP1Q6ZVC0 841 aa8.67□□□□□ -1.02
ECHDC1-208ENST00000436638 PHOX2BQ99453 314 aa8.67□□□□□ -1.02
ECHDC1-208ENST00000436638 SETBP1Q9Y6X0 1596 aa8.67□□□□□ -1.02
ECHDC1-208ENST00000436638 NRXN1Q9ULB1 1477 aa8.66□□□□□ -1.02
ECHDC1-208ENST00000436638 ADAMTS13Q76LX8 1427 aa8.66□□□□□ -1.02
ECHDC1-208ENST00000436638 PRAG1Q86YV5 1406 aa8.66□□□□□ -1.02
ECHDC1-208ENST00000436638 PIK3R4Q99570 1358 aa8.66□□□□□ -1.02
ECHDC1-208ENST00000436638 KCNA6P17658 529 aa8.66□□□□□ -1.02
ECHDC1-208ENST00000436638 ZEB1P37275 1124 aaPredicted RBP8.66□□□□□ -1.02
ECHDC1-208ENST00000436638 BARGINQ6ZT62 677 aa8.66□□□□□ -1.02
ECHDC1-208ENST00000436638 CCDC102AQ96A19 550 aa8.66□□□□□ -1.02
ECHDC1-208ENST00000436638 PLA2G2EQ9NZK7 142 aa8.66□□□□□ -1.02
ECHDC1-208ENST00000436638 STK26Q9P289 416 aa8.66□□□□□ -1.02
ECHDC1-208ENST00000436638 ALKQ9UM73 1620 aa8.65□□□□□ -1.02
ECHDC1-208ENST00000436638 TMEM132EQ6IEE7 984 aa8.65□□□□□ -1.02
ECHDC1-208ENST00000436638 UBE2Q2Q8WVN8 375 aa8.65□□□□□ -1.02
ECHDC1-208ENST00000436638 NECTIN2Q92692 538 aa8.65□□□□□ -1.02
ECHDC1-208ENST00000436638 AMOTL2Q9Y2J4 779 aa8.65□□□□□ -1.02
ECHDC1-208ENST00000436638 LAMC1P11047 1609 aa8.65□□□□□ -1.03
ECHDC1-208ENST00000436638 ROCK2O75116 1388 aaKnown RBP8.64□□□□□ -1.03
ECHDC1-208ENST00000436638 METP08581 1390 aa8.64□□□□□ -1.03
ECHDC1-208ENST00000436638 ZNF335Q9H4Z2 1342 aaPredicted RBP8.64□□□□□ -1.03
ECHDC1-208ENST00000436638 NBPF8Q3BBV2 869 aa8.64□□□□□ -1.03
ECHDC1-208ENST00000436638 PROSER2Q86WR7 435 aaPredicted RBP8.64□□□□□ -1.03
ECHDC1-208ENST00000436638 NRXN3Q9Y4C0 1643 aa8.63□□□□□ -1.03
ECHDC1-208ENST00000436638 CARD11Q9BXL7 1154 aa8.63□□□□□ -1.03
ECHDC1-208ENST00000436638 POGKQ9P215 609 aa8.63□□□□□ -1.03
ECHDC1-208ENST00000436638 LRPPRCP42704 1394 aaKnown RBP8.62□□□□□ -1.03
ECHDC1-208ENST00000436638 APLP1P51693 650 aa8.62□□□□□ -1.03
ECHDC1-208ENST00000436638 NBPF1Q3BBV0 1214 aa8.62□□□□□ -1.03
ECHDC1-208ENST00000436638 TRAK1Q9UPV9 953 aa8.62□□□□□ -1.03
ECHDC1-208ENST00000436638 YTHDC2Q9H6S0 1430 aaKnown RBP8.62□□□□□ -1.03
ECHDC1-208ENST00000436638 CPS1P31327 1500 aa8.61□□□□□ -1.03
ECHDC1-208ENST00000436638 KIAA1210Q9ULL0 1709 aa8.61□□□□□ -1.03
ECHDC1-208ENST00000436638 DDX11L8A8MPP1 907 aa8.61□□□□□ -1.03
ECHDC1-208ENST00000436638 MDM2Q00987 491 aaPredicted RBP8.61□□□□□ -1.03
ECHDC1-208ENST00000436638 RDH13Q8NBN7 331 aa8.61□□□□□ -1.03
ECHDC1-208ENST00000436638 EIF3AQ14152 1382 aaKnown RBP8.61□□□□□ -1.03
ECHDC1-208ENST00000436638 ABCC11Q96J66 1382 aa8.61□□□□□ -1.03
ECHDC1-208ENST00000436638 RALGAPBQ86X10 1494 aa8.6□□□□□ -1.03
ECHDC1-208ENST00000436638 SLC10A3P09131 477 aa8.6□□□□□ -1.03
ECHDC1-208ENST00000436638 PTPRUQ92729 1446 aa8.6□□□□□ -1.03
ECHDC1-208ENST00000436638 CHD2O14647 1828 aaKnown RBP8.59□□□□□ -1.03
ECHDC1-208ENST00000436638 NKTRP30414 1462 aaKnown RBP8.59□□□□□ -1.03
ECHDC1-208ENST00000436638 TRPM1Q7Z4N2 1603 aa8.59□□□□□ -1.03
ECHDC1-208ENST00000436638 NEFLP07196 543 aa8.59□□□□□ -1.03
ECHDC1-208ENST00000436638 CFHP08603 1231 aa8.59□□□□□ -1.03
ECHDC1-208ENST00000436638 KMT5BQ4FZB7 885 aa8.59□□□□□ -1.03
ECHDC1-208ENST00000436638 SIRT1Q96EB6 747 aa8.59□□□□□ -1.03
ECHDC1-208ENST00000436638 PRAM1Q96QH2 718 aa8.59□□□□□ -1.03
ECHDC1-208ENST00000436638 PRR14Q9BWN1 585 aa8.59□□□□□ -1.03
ECHDC1-208ENST00000436638 NWD1Q149M9 1564 aa8.59□□□□□ -1.03
ECHDC1-208ENST00000436638 SETD1AO15047 1707 aaKnown RBP8.58□□□□□ -1.04
ECHDC1-208ENST00000436638 ADGRB1O14514 1584 aa8.58□□□□□ -1.04
ECHDC1-208ENST00000436638 PTCH1Q13635 1447 aa8.58□□□□□ -1.04
ECHDC1-208ENST00000436638 SAFB2Q14151 953 aaKnown RBP eCLIP8.58□□□□□ -1.04
ECHDC1-208ENST00000436638 WAPLQ7Z5K2 1190 aa8.58□□□□□ -1.04
ECHDC1-208ENST00000436638 SULF1Q8IWU6 871 aa8.58□□□□□ -1.04
ECHDC1-208ENST00000436638 ASXL1Q8IXJ9 1541 aa8.58□□□□□ -1.04
ECHDC1-208ENST00000436638 TMEM94Q12767 1356 aa8.58□□□□□ -1.04
ECHDC1-208ENST00000436638 GPRASP1Q5JY77 1395 aa8.58□□□□□ -1.04
ECHDC1-208ENST00000436638 TECPR2O15040 1411 aa8.57□□□□□ -1.04
ECHDC1-208ENST00000436638 FAM135BQ49AJ0 1406 aa8.57□□□□□ -1.04
ECHDC1-208ENST00000436638 COPS2P61201 443 aa8.57□□□□□ -1.04
ECHDC1-208ENST00000436638 KCNC4Q03721 635 aa8.57□□□□□ -1.04
ECHDC1-208ENST00000436638 DLC1Q96QB1 1528 aa8.57□□□□□ -1.04
ECHDC1-208ENST00000436638 MSH6P52701 1360 aa8.57□□□□□ -1.04
ECHDC1-208ENST00000436638 ROBO2Q9HCK4 1378 aa8.57□□□□□ -1.04
ECHDC1-208ENST00000436638 XRN1Q8IZH2 1706 aaKnown RBP8.57□□□□□ -1.04
ECHDC1-208ENST00000436638 CENPJQ9HC77 1338 aaPredicted RBP8.56□□□□□ -1.04
ECHDC1-208ENST00000436638 NCOA3Q9Y6Q9 1424 aa8.56□□□□□ -1.04
ECHDC1-208ENST00000436638 LRRC7Q96NW7 1537 aa8.56□□□□□ -1.04
ECHDC1-208ENST00000436638 ATF3P18847 181 aa8.56□□□□□ -1.04
ECHDC1-208ENST00000436638 CLCN1P35523 988 aa8.56□□□□□ -1.04
ECHDC1-208ENST00000436638 EIF4G2P78344 907 aaKnown RBP eCLIP8.56□□□□□ -1.04
ECHDC1-208ENST00000436638 AK7Q96M32 723 aa8.56□□□□□ -1.04
ECHDC1-208ENST00000436638 MTRQ99707 1265 aa8.56□□□□□ -1.04
ECHDC1-208ENST00000436638 C19orf44Q9H6X5 657 aa8.56□□□□□ -1.04
ECHDC1-208ENST00000436638 SLC24A3Q9HC58 644 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 169 ms