RNA–Protein interactions for RNA: ENST00000431387.8

NF1-204, Transcript of neurofibromin 1, humanhuman

TSL 1 (best) BASIC

Gene NF1, Length 2,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-204ENST00000431387 GAS2L2Q8NHY3 880 aa16.81■□□□□ 0.28
NF1-204ENST00000431387 ARID3AQ99856 593 aa16.81■□□□□ 0.28
NF1-204ENST00000431387 KNDC1Q76NI1 1749 aa16.81■□□□□ 0.28
NF1-204ENST00000431387 ROBO2Q9HCK4 1378 aa16.8■□□□□ 0.28
NF1-204ENST00000431387 ITSN1Q15811 1721 aa16.8■□□□□ 0.28
NF1-204ENST00000431387 DDX49Q9Y6V7 483 aaKnown RBP16.8■□□□□ 0.28
NF1-204ENST00000431387 NUTM2FA1L443 756 aa16.79■□□□□ 0.28
NF1-204ENST00000431387 HDGFP51858 240 aaKnown RBP16.79■□□□□ 0.28
NF1-204ENST00000431387 TTC21BQ7Z4L5 1316 aa16.79■□□□□ 0.28
NF1-204ENST00000431387 NCLP19338 710 aaKnown RBP16.79■□□□□ 0.28
NF1-204ENST00000431387 MCM10Q7L590 875 aa16.79■□□□□ 0.28
NF1-204ENST00000431387 GSPT1P15170 499 aaKnown RBP16.79■□□□□ 0.28
NF1-204ENST00000431387 PDCL3Q9H2J4 239 aa16.79■□□□□ 0.28
NF1-204ENST00000431387 NRKQ7Z2Y5 1582 aa16.78■□□□□ 0.28
NF1-204ENST00000431387 KIF24Q5T7B8 1368 aa16.78■□□□□ 0.28
NF1-204ENST00000431387 SKOR2Q2VWA4 1001 aaPredicted RBP16.78■□□□□ 0.28
NF1-204ENST00000431387 INTS3Q68E01 1043 aaKnown RBP16.78■□□□□ 0.28
NF1-204ENST00000431387 PLEKHM2Q8IWE5 1019 aa16.78■□□□□ 0.28
NF1-204ENST00000431387 DCTPP1Q9H773 170 aa16.78■□□□□ 0.28
NF1-204ENST00000431387 CDC45O75419 566 aa16.78■□□□□ 0.28
NF1-204ENST00000431387 CCDC173Q0VFZ6 552 aa16.78■□□□□ 0.28
NF1-204ENST00000431387 ZSCAN30Q86W11 494 aa16.78■□□□□ 0.28
NF1-204ENST00000431387 CIZ1Q9ULV3 898 aaPredicted RBP16.78■□□□□ 0.28
NF1-204ENST00000431387 ACEP12821 1306 aa16.78■□□□□ 0.28
NF1-204ENST00000431387 CHL1O00533 1208 aa16.77■□□□□ 0.27
NF1-204ENST00000431387 C16orf71Q8IYS4 520 aaPredicted RBP16.77■□□□□ 0.27
NF1-204ENST00000431387 FAM13BQ9NYF5 915 aa16.77■□□□□ 0.27
NF1-204ENST00000431387 RGS12O14924 1447 aa16.76■□□□□ 0.27
NF1-204ENST00000431387 K7ELQ4 463 aaPredicted RBP16.76■□□□□ 0.27
NF1-204ENST00000431387 HSP90AB2PQ58FF8 381 aa16.76■□□□□ 0.27
NF1-204ENST00000431387 R3HCC1Q9Y3T6 440 aaKnown RBP16.76■□□□□ 0.27
NF1-204ENST00000431387 TNRQ92752 1358 aa16.76■□□□□ 0.27
NF1-204ENST00000431387 MSNP26038 577 aaKnown RBP16.76■□□□□ 0.27
NF1-204ENST00000431387 PPP1R9BQ96SB3 815 aa16.76■□□□□ 0.27
NF1-204ENST00000431387 TMEM2Q9UHN6 1383 aa16.76■□□□□ 0.27
NF1-204ENST00000431387 SOX12O15370 315 aa16.75■□□□□ 0.27
NF1-204ENST00000431387 ANKRD44Q8N8A2 993 aa16.75■□□□□ 0.27
NF1-204ENST00000431387 OVOS2A0A0J9YW53 1432 aa16.75■□□□□ 0.27
NF1-204ENST00000431387 OVOS2Q6IE36 1432 aa16.75■□□□□ 0.27
NF1-204ENST00000431387 BAG4O95429 457 aaKnown RBP16.75■□□□□ 0.27
NF1-204ENST00000431387 CAVIN1Q6NZI2 390 aaKnown RBP16.75■□□□□ 0.27
NF1-204ENST00000431387 ATP10DQ9P241 1426 aa16.74■□□□□ 0.27
NF1-204ENST00000431387 OFD1O75665 1012 aa16.74■□□□□ 0.27
NF1-204ENST00000431387 MCTP1Q6DN14 999 aa16.74■□□□□ 0.27
NF1-204ENST00000431387 ANP32BQ92688 251 aaKnown RBP16.74■□□□□ 0.27
NF1-204ENST00000431387 XPCQ01831 940 aaPredicted RBP16.74■□□□□ 0.27
NF1-204ENST00000431387 ADAMTS13Q76LX8 1427 aa16.74■□□□□ 0.27
NF1-204ENST00000431387 PKP1Q13835 747 aa16.73■□□□□ 0.27
NF1-204ENST00000431387 TTC22Q5TAA0 569 aa16.73■□□□□ 0.27
NF1-204ENST00000431387 OTUD7AQ8TE49 926 aaPredicted RBP16.73■□□□□ 0.27
NF1-204ENST00000431387 CHAMP1Q96JM3 812 aa16.73■□□□□ 0.27
NF1-204ENST00000431387 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.73■□□□□ 0.27
NF1-204ENST00000431387 MSH6P52701 1360 aa16.73■□□□□ 0.27
NF1-204ENST00000431387 KIAA0232Q92628 1395 aa16.73■□□□□ 0.27
NF1-204ENST00000431387 HAP1P54257 671 aaPredicted RBP16.73■□□□□ 0.27
NF1-204ENST00000431387 CEP85Q6P2H3 762 aa16.73■□□□□ 0.27
NF1-204ENST00000431387 PLEKHG3A1L390 1219 aa16.72■□□□□ 0.27
NF1-204ENST00000431387 MIS18AQ9NYP9 233 aa16.72■□□□□ 0.27
NF1-204ENST00000431387 USP6P35125 1406 aa16.72■□□□□ 0.27
NF1-204ENST00000431387 PEAK1Q9H792 1746 aa16.72■□□□□ 0.27
NF1-204ENST00000431387 GOLGA6L22H0YM25 854 aa16.72■□□□□ 0.27
NF1-204ENST00000431387 RPAP2Q8IXW5 612 aaPredicted RBP16.72■□□□□ 0.27
NF1-204ENST00000431387 ZBTB7CA1YPR0 619 aa16.71■□□□□ 0.27
NF1-204ENST00000431387 MEIS3Q99687 375 aa16.71■□□□□ 0.27
NF1-204ENST00000431387 APBB1O00213 710 aa16.71■□□□□ 0.27
NF1-204ENST00000431387 KLHL40Q2TBA0 621 aa16.71■□□□□ 0.27
NF1-204ENST00000431387 RTL1A6NKG5 1358 aa16.71■□□□□ 0.27
NF1-204ENST00000431387 SMARCA5O60264 1052 aaPredicted RBP16.71■□□□□ 0.26
NF1-204ENST00000431387 RBSNQ9H1K0 784 aa16.71■□□□□ 0.26
NF1-204ENST00000431387 CRB1P82279 1406 aa16.71■□□□□ 0.26
NF1-204ENST00000431387 PTPRCP08575 1304 aa16.7■□□□□ 0.26
NF1-204ENST00000431387 AK9Q5TCS8 1911 aa16.7■□□□□ 0.26
NF1-204ENST00000431387 FOXO3O43524 673 aa16.7■□□□□ 0.26
NF1-204ENST00000431387 SLC4A2P04920 1241 aa16.7■□□□□ 0.26
NF1-204ENST00000431387 LTKP29376 864 aa16.7■□□□□ 0.26
NF1-204ENST00000431387 DNAJC5Q9H3Z4 198 aa16.7■□□□□ 0.26
NF1-204ENST00000431387 UBR1Q8IWV7 1749 aa16.7■□□□□ 0.26
NF1-204ENST00000431387 RBM27Q9P2N5 1060 aaKnown RBP16.7■□□□□ 0.26
NF1-204ENST00000431387 TOPAZ1Q8N9V7 1692 aa16.69■□□□□ 0.26
NF1-204ENST00000431387 USP31Q70CQ4 1352 aa16.69■□□□□ 0.26
NF1-204ENST00000431387 MAP3K19Q56UN5 1328 aa16.69■□□□□ 0.26
NF1-204ENST00000431387 RGPD1P0DJD0 1748 aa16.68■□□□□ 0.26
NF1-204ENST00000431387 ZSCAN23Q3MJ62 389 aa16.68■□□□□ 0.26
NF1-204ENST00000431387 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.68■□□□□ 0.26
NF1-204ENST00000431387 PRIM1P49642 420 aaKnown RBP16.68■□□□□ 0.26
NF1-204ENST00000431387 MTHFSDQ2M296 383 aaKnown RBP16.68■□□□□ 0.26
NF1-204ENST00000431387 SLC26A8Q96RN1 970 aa16.68■□□□□ 0.26
NF1-204ENST00000431387 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.68■□□□□ 0.26
NF1-204ENST00000431387 SDSP20132 328 aa16.67■□□□□ 0.26
NF1-204ENST00000431387 USP26Q9BXU7 913 aa16.67■□□□□ 0.26
NF1-204ENST00000431387 G2E3Q7L622 706 aa16.67■□□□□ 0.26
NF1-204ENST00000431387 NALCNQ8IZF0 1738 aa16.67■□□□□ 0.26
NF1-204ENST00000431387 PLEKHG1Q9ULL1 1385 aa16.66■□□□□ 0.26
NF1-204ENST00000431387 RABEP1Q15276 862 aa16.66■□□□□ 0.26
NF1-204ENST00000431387 FOXD4L5Q5VV16 416 aaPredicted RBP16.66■□□□□ 0.26
NF1-204ENST00000431387 SSH2Q76I76 1423 aa16.66■□□□□ 0.26
NF1-204ENST00000431387 FOXD4L4Q8WXT5 416 aaPredicted RBP16.66■□□□□ 0.26
NF1-204ENST00000431387 ARHGEF10O15013 1369 aa16.66■□□□□ 0.26
NF1-204ENST00000431387 PTPRUQ92729 1446 aa16.66■□□□□ 0.26
NF1-204ENST00000431387 F6X3S4 739 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms