RNA–Protein interactions for RNA: ENST00000417495.7

SP140-204, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-204ENST00000417495 CFAP65Q6ZU64 1925 aaKnown RBP11.15□□□□□ -0.62
SP140-204ENST00000417495 MAFGO15525 162 aa11.15□□□□□ -0.62
SP140-204ENST00000417495 HNRNPUQ00839 825 aaKnown RBP eCLIP11.15□□□□□ -0.62
SP140-204ENST00000417495 YTHDC2Q9H6S0 1430 aaKnown RBP11.15□□□□□ -0.63
SP140-204ENST00000417495 CCDC184Q52MB2 194 aa11.14□□□□□ -0.63
SP140-204ENST00000417495 POLR3AO14802 1390 aaPredicted RBP11.14□□□□□ -0.63
SP140-204ENST00000417495 ABCC11Q96J66 1382 aa11.14□□□□□ -0.63
SP140-204ENST00000417495 ARHGAP23Q9P227 1491 aa11.14□□□□□ -0.63
SP140-204ENST00000417495 LARP6Q9BRS8 491 aaKnown RBP11.14□□□□□ -0.63
SP140-204ENST00000417495 ATAD2Q6PL18 1390 aa11.14□□□□□ -0.63
SP140-204ENST00000417495 ANKRD36BQ8N2N9 1353 aa11.14□□□□□ -0.63
SP140-204ENST00000417495 RFX1P22670 979 aa11.14□□□□□ -0.63
SP140-204ENST00000417495 ZNF662Q6ZS27 426 aa11.14□□□□□ -0.63
SP140-204ENST00000417495 TMC1Q8TDI8 760 aa11.14□□□□□ -0.63
SP140-204ENST00000417495 RIMS2Q9UQ26 1411 aa11.13□□□□□ -0.63
SP140-204ENST00000417495 SMYD5Q6GMV2 418 aa11.13□□□□□ -0.63
SP140-204ENST00000417495 PROCA1Q8NCQ7 364 aaPredicted RBP11.13□□□□□ -0.63
SP140-204ENST00000417495 ATP7BP35670 1465 aa11.13□□□□□ -0.63
SP140-204ENST00000417495 SGIP1Q9BQI5 828 aa11.13□□□□□ -0.63
SP140-204ENST00000417495 SNRKQ9NRH2 765 aa11.13□□□□□ -0.63
SP140-204ENST00000417495 SHPRHQ149N8 1683 aa11.13□□□□□ -0.63
SP140-204ENST00000417495 ZNF330Q9Y3S2 320 aaPredicted RBP11.12□□□□□ -0.63
SP140-204ENST00000417495 KNSTRNQ9Y448 316 aa11.12□□□□□ -0.63
SP140-204ENST00000417495 EVC2Q86UK5 1308 aa11.12□□□□□ -0.63
SP140-204ENST00000417495 KIF20BQ96Q89 1820 aa11.12□□□□□ -0.63
SP140-204ENST00000417495 C3P01024 1663 aa11.12□□□□□ -0.63
SP140-204ENST00000417495 CDC42BPGQ6DT37 1551 aa11.12□□□□□ -0.63
SP140-204ENST00000417495 TCERG1O14776 1098 aaKnown RBP11.12□□□□□ -0.63
SP140-204ENST00000417495 HDGFP51858 240 aaKnown RBP11.12□□□□□ -0.63
SP140-204ENST00000417495 NOM1Q5C9Z4 860 aaKnown RBP11.12□□□□□ -0.63
SP140-204ENST00000417495 MRRFQ96E11 262 aaKnown RBP11.12□□□□□ -0.63
SP140-204ENST00000417495 FER1L4A9Z1Z3 1794 aa11.12□□□□□ -0.63
SP140-204ENST00000417495 ZNF142P52746 1687 aaPredicted RBP11.12□□□□□ -0.63
SP140-204ENST00000417495 NUDCQ9Y266 331 aa11.11□□□□□ -0.63
SP140-204ENST00000417495 ZMYM3Q14202 1370 aa11.11□□□□□ -0.63
SP140-204ENST00000417495 TXNDC2Q86VQ3 553 aa11.11□□□□□ -0.63
SP140-204ENST00000417495 OXER1Q8TDS5 423 aa11.1□□□□□ -0.63
SP140-204ENST00000417495 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.1□□□□□ -0.63
SP140-204ENST00000417495 NBPF11Q86T75 865 aa11.1□□□□□ -0.63
SP140-204ENST00000417495 TNRQ92752 1358 aa11.1□□□□□ -0.63
SP140-204ENST00000417495 SND1Q7KZF4 910 aaKnown RBP eCLIP11.1□□□□□ -0.63
SP140-204ENST00000417495 AKAP12Q02952 1782 aa11.1□□□□□ -0.63
SP140-204ENST00000417495 TOPAZ1Q8N9V7 1692 aa11.09□□□□□ -0.63
SP140-204ENST00000417495 HSP90AB3PQ58FF7 597 aa11.09□□□□□ -0.63
SP140-204ENST00000417495 SH3BP1Q9Y3L3 701 aa11.09□□□□□ -0.63
SP140-204ENST00000417495 CGNL1Q0VF96 1302 aa11.09□□□□□ -0.63
SP140-204ENST00000417495 MON2Q7Z3U7 1717 aa11.09□□□□□ -0.63
SP140-204ENST00000417495 PPP2R1AP30153 589 aa11.09□□□□□ -0.63
SP140-204ENST00000417495 TTLL12Q14166 644 aaPredicted RBP11.09□□□□□ -0.63
SP140-204ENST00000417495 TTC36A6NLP5 189 aa11.08□□□□□ -0.64
SP140-204ENST00000417495 LRRC7Q96NW7 1537 aa11.08□□□□□ -0.64
SP140-204ENST00000417495 PLEKHG1Q9ULL1 1385 aa11.08□□□□□ -0.64
SP140-204ENST00000417495 USP54Q70EL1 1684 aa11.08□□□□□ -0.64
SP140-204ENST00000417495 BRD1O95696 1058 aa11.07□□□□□ -0.64
SP140-204ENST00000417495 AMHR2Q16671 573 aa11.07□□□□□ -0.64
SP140-204ENST00000417495 PPP1R1BQ9UD71 204 aaPredicted RBP11.06□□□□□ -0.64
SP140-204ENST00000417495 GOPCQ9HD26 462 aa11.06□□□□□ -0.64
SP140-204ENST00000417495 CD163L1Q9NR16 1453 aa11.06□□□□□ -0.64
SP140-204ENST00000417495 TMEM2Q9UHN6 1383 aa11.06□□□□□ -0.64
SP140-204ENST00000417495 RIPK4P57078 832 aa11.05□□□□□ -0.64
SP140-204ENST00000417495 GIGYF2Q6Y7W6 1299 aaKnown RBP11.05□□□□□ -0.64
SP140-204ENST00000417495 FAM9BQ8IZU0 186 aa11.05□□□□□ -0.64
SP140-204ENST00000417495 SPATA32Q96LK8 384 aa11.05□□□□□ -0.64
SP140-204ENST00000417495 CCDC94Q9BW85 323 aaPredicted RBP11.05□□□□□ -0.64
SP140-204ENST00000417495 GDPD2Q9HCC8 539 aa11.05□□□□□ -0.64
SP140-204ENST00000417495 ZNF521Q96K83 1311 aa11.05□□□□□ -0.64
SP140-204ENST00000417495 ESPNB1AK53 854 aa11.05□□□□□ -0.64
SP140-204ENST00000417495 IRX5P78411 483 aaPredicted RBP11.05□□□□□ -0.64
SP140-204ENST00000417495 KIAA1211Q6ZU35 1233 aa11.05□□□□□ -0.64
SP140-204ENST00000417495 XRN1Q8IZH2 1706 aaKnown RBP11.05□□□□□ -0.64
SP140-204ENST00000417495 ADAMTSL3P82987 1691 aa11.05□□□□□ -0.64
SP140-204ENST00000417495 GIMAP6Q6P9H5 292 aa11.04□□□□□ -0.64
SP140-204ENST00000417495 GLMNQ92990 594 aa11.04□□□□□ -0.64
SP140-204ENST00000417495 PIK3R4Q99570 1358 aa11.04□□□□□ -0.64
SP140-204ENST00000417495 IQSEC2Q5JU85 1478 aa11.04□□□□□ -0.64
SP140-204ENST00000417495 ITSN1Q15811 1721 aa11.04□□□□□ -0.64
SP140-204ENST00000417495 PTCH1Q13635 1447 aa11.04□□□□□ -0.64
SP140-204ENST00000417495 NSD3Q9BZ95 1437 aa11.04□□□□□ -0.64
SP140-204ENST00000417495 NRKQ7Z2Y5 1582 aa11.03□□□□□ -0.64
SP140-204ENST00000417495 CARD14Q9BXL6 1004 aa11.03□□□□□ -0.64
SP140-204ENST00000417495 COL3A1P02461 1466 aaPredicted RBP11.03□□□□□ -0.64
SP140-204ENST00000417495 IRF6O14896 467 aa11.02□□□□□ -0.64
SP140-204ENST00000417495 ADAMTS19Q8TE59 1207 aa11.02□□□□□ -0.64
SP140-204ENST00000417495 ADAMTS13Q76LX8 1427 aa11.02□□□□□ -0.65
SP140-204ENST00000417495 PCMTD1Q96MG8 357 aaPredicted RBP11.02□□□□□ -0.65
SP140-204ENST00000417495 TSPYL1Q9H0U9 437 aa11.02□□□□□ -0.65
SP140-204ENST00000417495 CPSF1Q10570 1443 aaKnown RBP11.02□□□□□ -0.65
SP140-204ENST00000417495 NBPF9Q3BBW0 867 aa11.01□□□□□ -0.65
SP140-204ENST00000417495 SEMA3FQ13275 785 aa11.01□□□□□ -0.65
SP140-204ENST00000417495 B4GALNT3Q6L9W6 998 aa11.01□□□□□ -0.65
SP140-204ENST00000417495 TRMT2AQ8IZ69 625 aaKnown RBP11.01□□□□□ -0.65
SP140-204ENST00000417495 BANK1Q8NDB2 785 aa11.01□□□□□ -0.65
SP140-204ENST00000417495 CALR3Q96L12 384 aaKnown RBP11.01□□□□□ -0.65
SP140-204ENST00000417495 NALCNQ8IZF0 1738 aa11□□□□□ -0.65
SP140-204ENST00000417495 KCNA1Q09470 495 aa11□□□□□ -0.65
SP140-204ENST00000417495 POLR3EQ9NVU0 708 aa11□□□□□ -0.65
SP140-204ENST00000417495 FAM13BQ9NYF5 915 aa11□□□□□ -0.65
SP140-204ENST00000417495 PNPLA6Q8IY17 1366 aa11□□□□□ -0.65
SP140-204ENST00000417495 SATB1Q01826 763 aa10.99□□□□□ -0.65
SP140-204ENST00000417495 LMOD3Q0VAK6 560 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms