RNA–Protein interactions for RNA: ENST00000414160.6

C2CD3-204, Transcript of C2 calcium dependent domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene C2CD3, Length 2,431 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-204ENST00000414160 TWISTNBQ3B726 338 aaPredicted RBP12.49□□□□□ -0.41
C2CD3-204ENST00000414160 IFT57Q9NWB7 429 aa12.49□□□□□ -0.41
C2CD3-204ENST00000414160 FAM135BQ49AJ0 1406 aa12.49□□□□□ -0.41
C2CD3-204ENST00000414160 CABP1Q9NZU7 370 aa12.49□□□□□ -0.41
C2CD3-204ENST00000414160 ARHGEF28Q8N1W1 1705 aaKnown RBP12.49□□□□□ -0.41
C2CD3-204ENST00000414160 SDSP20132 328 aa12.48□□□□□ -0.41
C2CD3-204ENST00000414160 PRAM1Q96QH2 718 aa12.48□□□□□ -0.41
C2CD3-204ENST00000414160 API5Q9BZZ5 524 aaKnown RBP12.48□□□□□ -0.41
C2CD3-204ENST00000414160 SLC52A1Q9NWF4 448 aa12.48□□□□□ -0.41
C2CD3-204ENST00000414160 FAM13BQ9NYF5 915 aa12.48□□□□□ -0.41
C2CD3-204ENST00000414160 AK9Q5TCS8 1911 aa12.48□□□□□ -0.41
C2CD3-204ENST00000414160 INTS3Q68E01 1043 aaKnown RBP12.48□□□□□ -0.41
C2CD3-204ENST00000414160 HDGFL2Q7Z4V5 671 aaPredicted RBP12.48□□□□□ -0.41
C2CD3-204ENST00000414160 TMEM63CQ9P1W3 806 aa12.48□□□□□ -0.41
C2CD3-204ENST00000414160 NSFL1CQ9UNZ2 370 aaKnown RBP12.48□□□□□ -0.41
C2CD3-204ENST00000414160 PIK3C2BO00750 1634 aa12.47□□□□□ -0.41
C2CD3-204ENST00000414160 ZKSCAN5Q9Y2L8 839 aa12.47□□□□□ -0.41
C2CD3-204ENST00000414160 LRRC7Q96NW7 1537 aa12.47□□□□□ -0.41
C2CD3-204ENST00000414160 PTPRMP28827 1452 aa12.47□□□□□ -0.41
C2CD3-204ENST00000414160 IDI1Q13907 227 aa12.47□□□□□ -0.41
C2CD3-204ENST00000414160 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.47□□□□□ -0.41
C2CD3-204ENST00000414160 CFAP44Q96MT7 982 aa12.47□□□□□ -0.41
C2CD3-204ENST00000414160 TNRQ92752 1358 aa12.46□□□□□ -0.41
C2CD3-204ENST00000414160 ST18O60284 1047 aa12.46□□□□□ -0.41
C2CD3-204ENST00000414160 LRSAM1Q6UWE0 723 aa12.46□□□□□ -0.41
C2CD3-204ENST00000414160 CDK19Q9BWU1 502 aa12.46□□□□□ -0.41
C2CD3-204ENST00000414160 SYCE3A1L190 88 aa12.46□□□□□ -0.42
C2CD3-204ENST00000414160 SMARCA5O60264 1052 aaPredicted RBP12.46□□□□□ -0.42
C2CD3-204ENST00000414160 ANKRD44Q8N8A2 993 aa12.45□□□□□ -0.42
C2CD3-204ENST00000414160 UQCRHLA0A096LP55 91 aa12.45□□□□□ -0.42
C2CD3-204ENST00000414160 FAM83GA6ND36 823 aa12.45□□□□□ -0.42
C2CD3-204ENST00000414160 APBB1O00213 710 aa12.45□□□□□ -0.42
C2CD3-204ENST00000414160 UQCRHP07919 91 aa12.45□□□□□ -0.42
C2CD3-204ENST00000414160 FOXD4L5Q5VV16 416 aaPredicted RBP12.45□□□□□ -0.42
C2CD3-204ENST00000414160 FOXD4L4Q8WXT5 416 aaPredicted RBP12.45□□□□□ -0.42
C2CD3-204ENST00000414160 NEXMIFQ5QGS0 1516 aa12.44□□□□□ -0.42
C2CD3-204ENST00000414160 IL13P35225 146 aa12.44□□□□□ -0.42
C2CD3-204ENST00000414160 ZFYVE9O95405 1425 aa12.44□□□□□ -0.42
C2CD3-204ENST00000414160 EMILIN1Q9Y6C2 1016 aa12.43□□□□□ -0.42
C2CD3-204ENST00000414160 KIF24Q5T7B8 1368 aa12.43□□□□□ -0.42
C2CD3-204ENST00000414160 MCM5P33992 734 aa12.43□□□□□ -0.42
C2CD3-204ENST00000414160 DCTN1Q14203 1278 aa12.43□□□□□ -0.42
C2CD3-204ENST00000414160 CEP85Q6P2H3 762 aa12.43□□□□□ -0.42
C2CD3-204ENST00000414160 CASC1Q6TDU7 716 aa12.43□□□□□ -0.42
C2CD3-204ENST00000414160 RNF214Q8ND24 703 aa12.43□□□□□ -0.42
C2CD3-204ENST00000414160 CSPP1Q1MSJ5 1256 aa12.42□□□□□ -0.42
C2CD3-204ENST00000414160 CDC42BPGQ6DT37 1551 aa12.42□□□□□ -0.42
C2CD3-204ENST00000414160 RPAP2Q8IXW5 612 aaPredicted RBP12.42□□□□□ -0.42
C2CD3-204ENST00000414160 MAP7D2Q96T17 732 aa12.42□□□□□ -0.42
C2CD3-204ENST00000414160 YTHDC2Q9H6S0 1430 aaKnown RBP12.42□□□□□ -0.42
C2CD3-204ENST00000414160 REC8O95072 547 aa12.42□□□□□ -0.42
C2CD3-204ENST00000414160 FBXO31Q5XUX0 539 aaPredicted RBP12.42□□□□□ -0.42
C2CD3-204ENST00000414160 CCDC39Q9UFE4 941 aa12.42□□□□□ -0.42
C2CD3-204ENST00000414160 SETD1BQ9UPS6 1966 aaKnown RBP12.41□□□□□ -0.42
C2CD3-204ENST00000414160 ATP10DQ9P241 1426 aa12.41□□□□□ -0.42
C2CD3-204ENST00000414160 KNDC1Q76NI1 1749 aa12.41□□□□□ -0.42
C2CD3-204ENST00000414160 KDM4FA0A1W2PPD8 638 aa12.41□□□□□ -0.42
C2CD3-204ENST00000414160 ERC2O15083 957 aa12.41□□□□□ -0.42
C2CD3-204ENST00000414160 TMX3Q96JJ7 454 aa12.41□□□□□ -0.42
C2CD3-204ENST00000414160 DYNC1I1O14576 645 aa12.4□□□□□ -0.42
C2CD3-204ENST00000414160 NEK4P51957 841 aa12.4□□□□□ -0.42
C2CD3-204ENST00000414160 KRT24Q2M2I5 525 aa12.4□□□□□ -0.42
C2CD3-204ENST00000414160 PRDM4Q9UKN5 801 aa12.4□□□□□ -0.42
C2CD3-204ENST00000414160 ZNF142P52746 1687 aaPredicted RBP12.4□□□□□ -0.42
C2CD3-204ENST00000414160 A2ML1A8K2U0 1454 aa12.4□□□□□ -0.42
C2CD3-204ENST00000414160 ANKRD26Q9UPS8 1709 aa12.39□□□□□ -0.43
C2CD3-204ENST00000414160 MEIS3Q99687 375 aa12.39□□□□□ -0.43
C2CD3-204ENST00000414160 TMEM131LA2VDJ0 1609 aa12.39□□□□□ -0.43
C2CD3-204ENST00000414160 BRD1O95696 1058 aa12.39□□□□□ -0.43
C2CD3-204ENST00000414160 MBD3O95983 291 aa12.39□□□□□ -0.43
C2CD3-204ENST00000414160 CEBPAP49715 358 aaPredicted RBP12.39□□□□□ -0.43
C2CD3-204ENST00000414160 LMOD3Q0VAK6 560 aa12.39□□□□□ -0.43
C2CD3-204ENST00000414160 SASS6Q6UVJ0 657 aa12.39□□□□□ -0.43
C2CD3-204ENST00000414160 ZRANB1Q9UGI0 708 aa12.39□□□□□ -0.43
C2CD3-204ENST00000414160 RTL1A6NKG5 1358 aa12.38□□□□□ -0.43
C2CD3-204ENST00000414160 RGS12O14924 1447 aa12.38□□□□□ -0.43
C2CD3-204ENST00000414160 TULP1O00294 542 aaPredicted RBP12.38□□□□□ -0.43
C2CD3-204ENST00000414160 CEP170BQ9Y4F5 1589 aaPredicted RBP12.37□□□□□ -0.43
C2CD3-204ENST00000414160 PDE1AP54750 535 aa12.37□□□□□ -0.43
C2CD3-204ENST00000414160 TPRNQ4KMQ1 711 aa12.37□□□□□ -0.43
C2CD3-204ENST00000414160 NME9Q86XW9 330 aa12.37□□□□□ -0.43
C2CD3-204ENST00000414160 ARID3AQ99856 593 aa12.37□□□□□ -0.43
C2CD3-204ENST00000414160 RIMS2Q9UQ26 1411 aa12.37□□□□□ -0.43
C2CD3-204ENST00000414160 CUL4AQ13619 759 aa12.37□□□□□ -0.43
C2CD3-204ENST00000414160 TSPY26PQ9H489 355 aa12.37□□□□□ -0.43
C2CD3-204ENST00000414160 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.37□□□□□ -0.43
C2CD3-204ENST00000414160 UBR1Q8IWV7 1749 aa12.36□□□□□ -0.43
C2CD3-204ENST00000414160 WAPLQ7Z5K2 1190 aa12.36□□□□□ -0.43
C2CD3-204ENST00000414160 OSBPL3Q9H4L5 887 aa12.36□□□□□ -0.43
C2CD3-204ENST00000414160 PTMAP06454 111 aaKnown RBP12.36□□□□□ -0.43
C2CD3-204ENST00000414160 RRS1Q15050 365 aaKnown RBP12.36□□□□□ -0.43
C2CD3-204ENST00000414160 MPNDQ8N594 471 aa12.36□□□□□ -0.43
C2CD3-204ENST00000414160 PALD1Q9ULE6 856 aa12.36□□□□□ -0.43
C2CD3-204ENST00000414160 MSH6P52701 1360 aa12.35□□□□□ -0.43
C2CD3-204ENST00000414160 GADD45BO75293 160 aaPredicted RBP12.35□□□□□ -0.43
C2CD3-204ENST00000414160 FOXD4L6Q3SYB3 417 aaPredicted RBP12.35□□□□□ -0.43
C2CD3-204ENST00000414160 TSHZ3Q63HK5 1081 aa12.35□□□□□ -0.43
C2CD3-204ENST00000414160 FOXD4L3Q6VB84 417 aaPredicted RBP12.35□□□□□ -0.43
C2CD3-204ENST00000414160 NOL8Q76FK4 1167 aaKnown RBP12.35□□□□□ -0.43
C2CD3-204ENST00000414160 MTERF4Q7Z6M4 381 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms