RNA–Protein interactions for RNA: ENST00000412770.6

PPP6R1-201, Transcript of protein phosphatase 6 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP6R1, Length 3,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R1-201ENST00000412770 CDK12Q9NYV4 1490 aaPredicted RBP20.73■□□□□ 0.91
PPP6R1-201ENST00000412770 ARHGEF10O15013 1369 aa20.72■□□□□ 0.91
PPP6R1-201ENST00000412770 CABP4P57796 275 aa20.72■□□□□ 0.91
PPP6R1-201ENST00000412770 C1orf167Q5SNV9 1468 aa20.72■□□□□ 0.91
PPP6R1-201ENST00000412770 ZNF521Q96K83 1311 aa20.71■□□□□ 0.91
PPP6R1-201ENST00000412770 NRXN3Q9Y4C0 1643 aa20.71■□□□□ 0.91
PPP6R1-201ENST00000412770 ADAMTSL3P82987 1691 aa20.71■□□□□ 0.91
PPP6R1-201ENST00000412770 C8orf58Q8NAV2 365 aa20.7■□□□□ 0.91
PPP6R1-201ENST00000412770 KRT24Q2M2I5 525 aa20.7■□□□□ 0.9
PPP6R1-201ENST00000412770 TSPYL6Q8N831 410 aa20.7■□□□□ 0.9
PPP6R1-201ENST00000412770 AIMP1Q12904 312 aaKnown RBP20.7■□□□□ 0.9
PPP6R1-201ENST00000412770 OS9Q13438 667 aaPredicted RBP20.7■□□□□ 0.9
PPP6R1-201ENST00000412770 PNPLA6Q8IY17 1366 aa20.69■□□□□ 0.9
PPP6R1-201ENST00000412770 HSP90AB1P08238 724 aaKnown RBP20.68■□□□□ 0.9
PPP6R1-201ENST00000412770 MVPQ14764 893 aaKnown RBP20.68■□□□□ 0.9
PPP6R1-201ENST00000412770 ALDH1L2Q3SY69 923 aa20.68■□□□□ 0.9
PPP6R1-201ENST00000412770 USP31Q70CQ4 1352 aa20.68■□□□□ 0.9
PPP6R1-201ENST00000412770 TMEM57Q8N5G2 664 aa20.67■□□□□ 0.9
PPP6R1-201ENST00000412770 IFNL2Q8IZJ0 200 aa20.67■□□□□ 0.9
PPP6R1-201ENST00000412770 OVOS2A0A0J9YW53 1432 aa20.66■□□□□ 0.9
PPP6R1-201ENST00000412770 OVOS2Q6IE36 1432 aa20.66■□□□□ 0.9
PPP6R1-201ENST00000412770 TRIM27P14373 513 aa20.66■□□□□ 0.9
PPP6R1-201ENST00000412770 IGSF1Q8N6C5 1336 aa20.66■□□□□ 0.9
PPP6R1-201ENST00000412770 AKAP4Q5JQC9 854 aa20.66■□□□□ 0.9
PPP6R1-201ENST00000412770 C1orf115Q9H7X2 142 aa20.65■□□□□ 0.9
PPP6R1-201ENST00000412770 MAP3K5Q99683 1374 aa20.65■□□□□ 0.9
PPP6R1-201ENST00000412770 TNNQ9UQP3 1299 aa20.65■□□□□ 0.9
PPP6R1-201ENST00000412770 KIAA0232Q92628 1395 aa20.65■□□□□ 0.9
PPP6R1-201ENST00000412770 TSHZ2Q9NRE2 1034 aa20.65■□□□□ 0.9
PPP6R1-201ENST00000412770 SPATA31A3Q5VYP0 1347 aa20.64■□□□□ 0.89
PPP6R1-201ENST00000412770 HTATSF1O43719 755 aaKnown RBP20.64■□□□□ 0.89
PPP6R1-201ENST00000412770 HMMRO75330 724 aa20.64■□□□□ 0.89
PPP6R1-201ENST00000412770 NGLY1Q96IV0 654 aa20.64■□□□□ 0.89
PPP6R1-201ENST00000412770 BTG4Q9NY30 223 aa20.64■□□□□ 0.89
PPP6R1-201ENST00000412770 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.64■□□□□ 0.89
PPP6R1-201ENST00000412770 NCBP3Q53F19 620 aaKnown RBP20.63■□□□□ 0.89
PPP6R1-201ENST00000412770 VAMP4O75379 141 aa20.63■□□□□ 0.89
PPP6R1-201ENST00000412770 DDX58O95786 925 aaKnown RBP20.62■□□□□ 0.89
PPP6R1-201ENST00000412770 KAT6BQ8WYB5 2073 aa20.61■□□□□ 0.89
PPP6R1-201ENST00000412770 ITSN1Q15811 1721 aa20.61■□□□□ 0.89
PPP6R1-201ENST00000412770 TRMT2AQ8IZ69 625 aaKnown RBP20.61■□□□□ 0.89
PPP6R1-201ENST00000412770 RBM42Q9BTD8 480 aaKnown RBP20.61■□□□□ 0.89
PPP6R1-201ENST00000412770 LGR6Q9HBX8 967 aa20.61■□□□□ 0.89
PPP6R1-201ENST00000412770 AAMPQ13685 434 aa20.61■□□□□ 0.89
PPP6R1-201ENST00000412770 ZCRB1Q8TBF4 217 aaKnown RBP20.61■□□□□ 0.89
PPP6R1-201ENST00000412770 PTCD1O75127 700 aaKnown RBP20.61■□□□□ 0.89
PPP6R1-201ENST00000412770 ANKRD45Q5TZF3 282 aa20.61■□□□□ 0.89
PPP6R1-201ENST00000412770 C9orf78Q9NZ63 289 aaPredicted RBP20.61■□□□□ 0.89
PPP6R1-201ENST00000412770 RTL1A6NKG5 1358 aa20.6■□□□□ 0.89
PPP6R1-201ENST00000412770 NEXNQ0ZGT2 675 aa20.6■□□□□ 0.89
PPP6R1-201ENST00000412770 AXIN2Q9Y2T1 843 aa20.6■□□□□ 0.89
PPP6R1-201ENST00000412770 KIF24Q5T7B8 1368 aa20.6■□□□□ 0.89
PPP6R1-201ENST00000412770 RBM19Q9Y4C8 960 aaKnown RBP20.6■□□□□ 0.89
PPP6R1-201ENST00000412770 RIC3Q7Z5B4 369 aa20.6■□□□□ 0.89
PPP6R1-201ENST00000412770 MYL6BP14649 208 aa20.59■□□□□ 0.89
PPP6R1-201ENST00000412770 SLC39A6Q13433 755 aa20.59■□□□□ 0.89
PPP6R1-201ENST00000412770 F6X3S4 739 aa20.58■□□□□ 0.89
PPP6R1-201ENST00000412770 CHL1O00533 1208 aa20.58■□□□□ 0.89
PPP6R1-201ENST00000412770 RNF123Q5XPI4 1314 aa20.58■□□□□ 0.88
PPP6R1-201ENST00000412770 RLBP1P12271 317 aa20.58■□□□□ 0.88
PPP6R1-201ENST00000412770 IL2RBP14784 551 aa20.58■□□□□ 0.88
PPP6R1-201ENST00000412770 ERBB3P21860 1342 aa20.57■□□□□ 0.88
PPP6R1-201ENST00000412770 IL17REQ8NFR9 667 aa20.57■□□□□ 0.88
PPP6R1-201ENST00000412770 EXOC5O00471 708 aa20.56■□□□□ 0.88
PPP6R1-201ENST00000412770 RNMTO43148 476 aaKnown RBP20.56■□□□□ 0.88
PPP6R1-201ENST00000412770 ANXA1P04083 346 aa20.56■□□□□ 0.88
PPP6R1-201ENST00000412770 CHMP3Q9Y3E7 222 aa20.56■□□□□ 0.88
PPP6R1-201ENST00000412770 HDAC5Q9UQL6 1122 aa20.56■□□□□ 0.88
PPP6R1-201ENST00000412770 NFATC2IPQ8NCF5 419 aa20.55■□□□□ 0.88
PPP6R1-201ENST00000412770 KNDC1Q76NI1 1749 aa20.55■□□□□ 0.88
PPP6R1-201ENST00000412770 MRPL50Q8N5N7 158 aaKnown RBP20.55■□□□□ 0.88
PPP6R1-201ENST00000412770 C8orf37Q96NL8 207 aa20.55■□□□□ 0.88
PPP6R1-201ENST00000412770 USP32Q8NFA0 1604 aa20.54■□□□□ 0.88
PPP6R1-201ENST00000412770 TNS3Q68CZ2 1445 aa20.54■□□□□ 0.88
PPP6R1-201ENST00000412770 LNPKQ9C0E8 428 aa20.54■□□□□ 0.88
PPP6R1-201ENST00000412770 TMOD3Q9NYL9 352 aa20.54■□□□□ 0.88
PPP6R1-201ENST00000412770 UBTFL1P0CB47 393 aaPredicted RBP20.54■□□□□ 0.88
PPP6R1-201ENST00000412770 SKAP1Q86WV1 359 aa20.54■□□□□ 0.88
PPP6R1-201ENST00000412770 LRRC7Q96NW7 1537 aa20.54■□□□□ 0.88
PPP6R1-201ENST00000412770 PHF23Q9BUL5 403 aaPredicted RBP20.53■□□□□ 0.88
PPP6R1-201ENST00000412770 NPHP1O15259 732 aa20.53■□□□□ 0.88
PPP6R1-201ENST00000412770 CCT4P50991 539 aaKnown RBP20.53■□□□□ 0.88
PPP6R1-201ENST00000412770 FLIIQ13045 1269 aa20.53■□□□□ 0.88
PPP6R1-201ENST00000412770 MST1RQ04912 1400 aa20.53■□□□□ 0.88
PPP6R1-201ENST00000412770 LARP1Q6PKG0 1096 aaKnown RBP20.52■□□□□ 0.88
PPP6R1-201ENST00000412770 GNAI3P08754 354 aa20.52■□□□□ 0.87
PPP6R1-201ENST00000412770 MAP2P11137 1827 aaKnown RBP20.52■□□□□ 0.87
PPP6R1-201ENST00000412770 KIF20BQ96Q89 1820 aa20.51■□□□□ 0.87
PPP6R1-201ENST00000412770 SRCIN1Q9C0H9 1055 aa20.51■□□□□ 0.87
PPP6R1-201ENST00000412770 ADGRB2O60241 1585 aa20.5■□□□□ 0.87
PPP6R1-201ENST00000412770 DCAF5Q96JK2 942 aa20.5■□□□□ 0.87
PPP6R1-201ENST00000412770 FMNL2Q96PY5 1086 aa20.5■□□□□ 0.87
PPP6R1-201ENST00000412770 NCOA3Q9Y6Q9 1424 aa20.5■□□□□ 0.87
PPP6R1-201ENST00000412770 PDZRN3Q9UPQ7 1066 aa20.5■□□□□ 0.87
PPP6R1-201ENST00000412770 PDE4AP27815 886 aa20.49■□□□□ 0.87
PPP6R1-201ENST00000412770 DBF4Q9UBU7 674 aaPredicted RBP20.49■□□□□ 0.87
PPP6R1-201ENST00000412770 CHPF2Q9P2E5 772 aa20.48■□□□□ 0.87
PPP6R1-201ENST00000412770 DCCP43146 1447 aa20.48■□□□□ 0.87
PPP6R1-201ENST00000412770 ARHGAP45Q92619 1136 aa20.48■□□□□ 0.87
PPP6R1-201ENST00000412770 PTPRCP08575 1304 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms