RNA–Protein interactions for RNA: ENST00000407595.2

CCDC85A-201, Transcript of coiled-coil domain containing 85A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC85A, Length 3,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85A-201ENST00000407595 INTS3Q68E01 1043 aaKnown RBP19.08■□□□□ 0.65
CCDC85A-201ENST00000407595 CCDC85AQ96PX6 553 aaPredicted RBP19.08■□□□□ 0.65
CCDC85A-201ENST00000407595 TRIM35Q9UPQ4 493 aa19.08■□□□□ 0.65
CCDC85A-201ENST00000407595 ZSCAN30Q86W11 494 aa19.08■□□□□ 0.64
CCDC85A-201ENST00000407595 MLH3Q9UHC1 1453 aa19.08■□□□□ 0.64
CCDC85A-201ENST00000407595 DRC7Q8IY82 874 aa19.08■□□□□ 0.64
CCDC85A-201ENST00000407595 JARID2Q92833 1246 aaPredicted RBP19.08■□□□□ 0.64
CCDC85A-201ENST00000407595 REC8O95072 547 aa19.07■□□□□ 0.64
CCDC85A-201ENST00000407595 CHMP4AQ9BY43 222 aa19.07■□□□□ 0.64
CCDC85A-201ENST00000407595 GCC1Q96CN9 775 aa19.07■□□□□ 0.64
CCDC85A-201ENST00000407595 USP19O94966 1318 aa19.07■□□□□ 0.64
CCDC85A-201ENST00000407595 ZNF521Q96K83 1311 aa19.07■□□□□ 0.64
CCDC85A-201ENST00000407595 GNAI2P04899 355 aa19.06■□□□□ 0.64
CCDC85A-201ENST00000407595 NEK4P51957 841 aa19.06■□□□□ 0.64
CCDC85A-201ENST00000407595 IFIT2P09913 472 aaKnown RBP19.06■□□□□ 0.64
CCDC85A-201ENST00000407595 CT47B1P0C2W7 299 aaPredicted RBP19.06■□□□□ 0.64
CCDC85A-201ENST00000407595 DDX58O95786 925 aaKnown RBP19.05■□□□□ 0.64
CCDC85A-201ENST00000407595 TRPM2O94759 1503 aa19.05■□□□□ 0.64
CCDC85A-201ENST00000407595 GOLGA6L4A6NEF3 574 aa19.05■□□□□ 0.64
CCDC85A-201ENST00000407595 GTF2E1P29083 439 aaPredicted RBP19.05■□□□□ 0.64
CCDC85A-201ENST00000407595 SLC39A6Q13433 755 aa19.05■□□□□ 0.64
CCDC85A-201ENST00000407595 RABEP1Q15276 862 aa19.04■□□□□ 0.64
CCDC85A-201ENST00000407595 NEUROD6Q96NK8 337 aa19.04■□□□□ 0.64
CCDC85A-201ENST00000407595 CLASP1Q7Z460 1538 aa19.04■□□□□ 0.64
CCDC85A-201ENST00000407595 TBC1D9Q6ZT07 1266 aa19.04■□□□□ 0.64
CCDC85A-201ENST00000407595 SRGAP3O43295 1099 aa19.04■□□□□ 0.64
CCDC85A-201ENST00000407595 GNAI3P08754 354 aa19.04■□□□□ 0.64
CCDC85A-201ENST00000407595 G3BP1Q13283 466 aaKnown RBP eCLIP19.04■□□□□ 0.64
CCDC85A-201ENST00000407595 TAF7Q15545 349 aaPredicted RBP19.04■□□□□ 0.64
CCDC85A-201ENST00000407595 SRCIN1Q9C0H9 1055 aa19.04■□□□□ 0.64
CCDC85A-201ENST00000407595 MEIS3Q99687 375 aa19.03■□□□□ 0.64
CCDC85A-201ENST00000407595 CABP4P57796 275 aa19.03■□□□□ 0.64
CCDC85A-201ENST00000407595 TBX22Q9Y458 520 aa19.03■□□□□ 0.64
CCDC85A-201ENST00000407595 TMEM2Q9UHN6 1383 aa19.03■□□□□ 0.64
CCDC85A-201ENST00000407595 VAMP4O75379 141 aa19.03■□□□□ 0.64
CCDC85A-201ENST00000407595 DIAPH3Q9NSV4 1193 aa19.03■□□□□ 0.64
CCDC85A-201ENST00000407595 KCNH5Q8NCM2 988 aa19.02■□□□□ 0.64
CCDC85A-201ENST00000407595 GPATCH3Q96I76 525 aa19.02■□□□□ 0.64
CCDC85A-201ENST00000407595 IL13P35225 146 aa19.02■□□□□ 0.64
CCDC85A-201ENST00000407595 ANKRD24Q8TF21 1146 aa19.02■□□□□ 0.64
CCDC85A-201ENST00000407595 ANTXR1Q9H6X2 564 aa19.02■□□□□ 0.64
CCDC85A-201ENST00000407595 ADAMTS2O95450 1211 aa19.02■□□□□ 0.63
CCDC85A-201ENST00000407595 TRMT2AQ8IZ69 625 aaKnown RBP19.02■□□□□ 0.63
CCDC85A-201ENST00000407595 CLTCL1P53675 1640 aa19.02■□□□□ 0.63
CCDC85A-201ENST00000407595 ABCC11Q96J66 1382 aa19.01■□□□□ 0.63
CCDC85A-201ENST00000407595 SYCE3A1L190 88 aa19.01■□□□□ 0.63
CCDC85A-201ENST00000407595 BAG4O95429 457 aaKnown RBP19.01■□□□□ 0.63
CCDC85A-201ENST00000407595 NUTM1Q86Y26 1132 aa19.01■□□□□ 0.63
CCDC85A-201ENST00000407595 UQCRHLA0A096LP55 91 aa19■□□□□ 0.63
CCDC85A-201ENST00000407595 UQCRHP07919 91 aa19■□□□□ 0.63
CCDC85A-201ENST00000407595 FLIIQ13045 1269 aa19■□□□□ 0.63
CCDC85A-201ENST00000407595 HDAC1Q13547 482 aaPredicted RBP19■□□□□ 0.63
CCDC85A-201ENST00000407595 BCL11BQ9C0K0 894 aaPredicted RBP19■□□□□ 0.63
CCDC85A-201ENST00000407595 RBM27Q9P2N5 1060 aaKnown RBP19■□□□□ 0.63
CCDC85A-201ENST00000407595 PRR36Q9H6K5 1346 aa18.99■□□□□ 0.63
CCDC85A-201ENST00000407595 ALDH1L2Q3SY69 923 aa18.99■□□□□ 0.63
CCDC85A-201ENST00000407595 CSPP1Q1MSJ5 1256 aa18.99■□□□□ 0.63
CCDC85A-201ENST00000407595 PUS7Q96PZ0 661 aaKnown RBP18.99■□□□□ 0.63
CCDC85A-201ENST00000407595 LRRFIP2Q9Y608 721 aaKnown RBP18.99■□□□□ 0.63
CCDC85A-201ENST00000407595 G2E3Q7L622 706 aa18.98■□□□□ 0.63
CCDC85A-201ENST00000407595 C16orf71Q8IYS4 520 aaPredicted RBP18.98■□□□□ 0.63
CCDC85A-201ENST00000407595 GCP02774 474 aa18.98■□□□□ 0.63
CCDC85A-201ENST00000407595 CCT4P50991 539 aaKnown RBP18.98■□□□□ 0.63
CCDC85A-201ENST00000407595 NUCB1Q02818 461 aa18.98■□□□□ 0.63
CCDC85A-201ENST00000407595 BMP2KLQ5H9B9 411 aa18.98■□□□□ 0.63
CCDC85A-201ENST00000407595 HDAC5Q9UQL6 1122 aa18.98■□□□□ 0.63
CCDC85A-201ENST00000407595 PHF14O94880 888 aa18.97■□□□□ 0.63
CCDC85A-201ENST00000407595 NPC1L1Q9UHC9 1359 aa18.97■□□□□ 0.63
CCDC85A-201ENST00000407595 PI4KAP2A4QPH2 592 aa18.97■□□□□ 0.63
CCDC85A-201ENST00000407595 PI4KAP1Q8N8J0 262 aa18.97■□□□□ 0.63
CCDC85A-201ENST00000407595 ABCC3O15438 1527 aa18.97■□□□□ 0.63
CCDC85A-201ENST00000407595 ROBO2Q9HCK4 1378 aa18.97■□□□□ 0.63
CCDC85A-201ENST00000407595 CCDC27Q2M243 656 aa18.97■□□□□ 0.63
CCDC85A-201ENST00000407595 GAS2L3Q86XJ1 694 aa18.96■□□□□ 0.63
CCDC85A-201ENST00000407595 CLASRPQ8N2M8 674 aaKnown RBP18.96■□□□□ 0.63
CCDC85A-201ENST00000407595 CCDC39Q9UFE4 941 aa18.96■□□□□ 0.63
CCDC85A-201ENST00000407595 INSRP06213 1382 aa18.96■□□□□ 0.63
CCDC85A-201ENST00000407595 HECW2Q9P2P5 1572 aa18.96■□□□□ 0.63
CCDC85A-201ENST00000407595 IQGAP3Q86VI3 1631 aa18.96■□□□□ 0.63
CCDC85A-201ENST00000407595 CROCC2H7BZ55 1655 aa18.95■□□□□ 0.62
CCDC85A-201ENST00000407595 SMC5Q8IY18 1101 aa18.95■□□□□ 0.62
CCDC85A-201ENST00000407595 HSP90B1P14625 803 aaKnown RBP18.95■□□□□ 0.62
CCDC85A-201ENST00000407595 MRPL50Q8N5N7 158 aaKnown RBP18.95■□□□□ 0.62
CCDC85A-201ENST00000407595 PLXNC1O60486 1568 aa18.95■□□□□ 0.62
CCDC85A-201ENST00000407595 HOXC9P31274 260 aa18.94■□□□□ 0.62
CCDC85A-201ENST00000407595 TOMM22Q9NS69 142 aa18.94■□□□□ 0.62
CCDC85A-201ENST00000407595 SPG7Q9UQ90 795 aa18.94■□□□□ 0.62
CCDC85A-201ENST00000407595 RAB3GAP1Q15042 981 aa18.94■□□□□ 0.62
CCDC85A-201ENST00000407595 LRRCC1Q9C099 1032 aa18.94■□□□□ 0.62
CCDC85A-201ENST00000407595 PDCL3Q9H2J4 239 aa18.94■□□□□ 0.62
CCDC85A-201ENST00000407595 KLHL40Q2TBA0 621 aa18.93■□□□□ 0.62
CCDC85A-201ENST00000407595 ZBTB40Q9NUA8 1239 aa18.93■□□□□ 0.62
CCDC85A-201ENST00000407595 ATP5J2-PTCD1G3V325 749 aa18.93■□□□□ 0.62
CCDC85A-201ENST00000407595 LGR6Q9HBX8 967 aa18.93■□□□□ 0.62
CCDC85A-201ENST00000407595 EFCAB6Q5THR3 1501 aa18.93■□□□□ 0.62
CCDC85A-201ENST00000407595 DNAJC2Q99543 621 aaKnown RBP18.93■□□□□ 0.62
CCDC85A-201ENST00000407595 CHPF2Q9P2E5 772 aa18.93■□□□□ 0.62
CCDC85A-201ENST00000407595 PRDM10Q9NQV6 1147 aa18.92■□□□□ 0.62
CCDC85A-201ENST00000407595 FOSBP53539 338 aa18.92■□□□□ 0.62
CCDC85A-201ENST00000407595 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms