RNA–Protein interactions for RNA: ENST00000402326.1

CBX3P9-201, Transcript of chromobox 3 pseudogene 9, humanhuman

BASIC

Gene CBX3P9, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P9-201ENST00000402326 CYP4X1Q8N118 509 aa4.53□□□□□ -1.68
CBX3P9-201ENST00000402326 CRIPAKQ8N1N5 446 aa4.53□□□□□ -1.68
CBX3P9-201ENST00000402326 PLPP7Q8NBV4 271 aa4.53□□□□□ -1.68
CBX3P9-201ENST00000402326 SNIP1Q8TAD8 396 aaKnown RBP4.53□□□□□ -1.68
CBX3P9-201ENST00000402326 TRIM52Q96A61 297 aa4.53□□□□□ -1.68
CBX3P9-201ENST00000402326 CHIC2Q9UKJ5 165 aa4.53□□□□□ -1.68
CBX3P9-201ENST00000402326 TTC24A2A3L6 582 aaPredicted RBP4.52□□□□□ -1.69
CBX3P9-201ENST00000402326 RFX1P22670 979 aa4.52□□□□□ -1.69
CBX3P9-201ENST00000402326 FSHRP23945 695 aa4.52□□□□□ -1.69
CBX3P9-201ENST00000402326 RAB15P59190 212 aa4.52□□□□□ -1.69
CBX3P9-201ENST00000402326 DHX9Q08211 1270 aaKnown RBP4.52□□□□□ -1.69
CBX3P9-201ENST00000402326 INTS6LQ5JSJ4 861 aaKnown RBP4.52□□□□□ -1.69
CBX3P9-201ENST00000402326 KRTAP19-1Q8IUB9 90 aa4.52□□□□□ -1.69
CBX3P9-201ENST00000402326 DOLKQ9UPQ8 538 aa4.52□□□□□ -1.69
CBX3P9-201ENST00000402326 MAFBQ9Y5Q3 323 aaPredicted RBP4.52□□□□□ -1.69
CBX3P9-201ENST00000402326 WASF2Q9Y6W5 498 aa4.52□□□□□ -1.69
CBX3P9-201ENST00000402326 USP17L3A6NCW0 530 aa4.51□□□□□ -1.69
CBX3P9-201ENST00000402326 USP17L4A6NCW7 530 aa4.51□□□□□ -1.69
CBX3P9-201ENST00000402326 USP17L5A8MUK1 530 aa4.51□□□□□ -1.69
CBX3P9-201ENST00000402326 ERVH48-1M5A8F1 160 aa4.51□□□□□ -1.69
CBX3P9-201ENST00000402326 TNFRSF10AO00220 468 aa4.51□□□□□ -1.69
CBX3P9-201ENST00000402326 PPP1R15AO75807 674 aaPredicted RBP4.51□□□□□ -1.69
CBX3P9-201ENST00000402326 USP4Q13107 963 aa4.51□□□□□ -1.69
CBX3P9-201ENST00000402326 EML3Q32P44 896 aa4.51□□□□□ -1.69
CBX3P9-201ENST00000402326 TSGA10IPQ3SY00 556 aa4.51□□□□□ -1.69
CBX3P9-201ENST00000402326 USP17L2Q6R6M4 530 aa4.51□□□□□ -1.69
CBX3P9-201ENST00000402326 USP17L1Q7RTZ2 530 aa4.51□□□□□ -1.69
CBX3P9-201ENST00000402326 PLEKHM2Q8IWE5 1019 aa4.51□□□□□ -1.69
CBX3P9-201ENST00000402326 CCDC116Q8IYX3 515 aa4.51□□□□□ -1.69
CBX3P9-201ENST00000402326 SIRT1Q96EB6 747 aa4.51□□□□□ -1.69
CBX3P9-201ENST00000402326 CCDC85AQ96PX6 553 aaPredicted RBP4.51□□□□□ -1.69
CBX3P9-201ENST00000402326 TOR4AQ9NXH8 423 aa4.51□□□□□ -1.69
CBX3P9-201ENST00000402326 PCDHB11Q9Y5F2 797 aa4.51□□□□□ -1.69
CBX3P9-201ENST00000402326 ACIN1Q9UKV3 1341 aaKnown RBP4.5□□□□□ -1.69
CBX3P9-201ENST00000402326 NNTQ13423 1086 aa4.5□□□□□ -1.69
CBX3P9-201ENST00000402326 NCOA4Q13772 614 aa4.5□□□□□ -1.69
CBX3P9-201ENST00000402326 OXLD1Q5BKU9 147 aa4.5□□□□□ -1.69
CBX3P9-201ENST00000402326 DEPDC4Q8N2C3 294 aa4.5□□□□□ -1.69
CBX3P9-201ENST00000402326 PBXIP1Q96AQ6 731 aa4.5□□□□□ -1.69
CBX3P9-201ENST00000402326 ESF1Q9H501 851 aaKnown RBP4.5□□□□□ -1.69
CBX3P9-201ENST00000402326 VRTNQ9H8Y1 702 aa4.5□□□□□ -1.69
CBX3P9-201ENST00000402326 PODXL2Q9NZ53 605 aa4.5□□□□□ -1.69
CBX3P9-201ENST00000402326 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.49□□□□□ -1.69
CBX3P9-201ENST00000402326 ATP5J2-PTCD1G3V325 749 aa4.49□□□□□ -1.69
CBX3P9-201ENST00000402326 J3QL48 77 aa4.49□□□□□ -1.69
CBX3P9-201ENST00000402326 RNF225M0QZC1 329 aaPredicted RBP4.49□□□□□ -1.69
CBX3P9-201ENST00000402326 MYCP01106 439 aaPredicted RBP4.49□□□□□ -1.69
CBX3P9-201ENST00000402326 NR3C2P08235 984 aa4.49□□□□□ -1.69
CBX3P9-201ENST00000402326 FOXK2Q01167 660 aa4.49□□□□□ -1.69
CBX3P9-201ENST00000402326 PPP1R26Q5T8A7 1209 aaPredicted RBP4.49□□□□□ -1.69
CBX3P9-201ENST00000402326 CDCA7Q9BWT1 371 aaPredicted RBP4.49□□□□□ -1.69
CBX3P9-201ENST00000402326 PGPEP1Q9NXJ5 209 aa4.49□□□□□ -1.69
CBX3P9-201ENST00000402326 MKRN1Q9UHC7 482 aaKnown RBP4.49□□□□□ -1.69
CBX3P9-201ENST00000402326 NOD1Q9Y239 953 aa4.49□□□□□ -1.69
CBX3P9-201ENST00000402326 EMILIN1Q9Y6C2 1016 aa4.49□□□□□ -1.69
CBX3P9-201ENST00000402326 PDIA4P13667 645 aaKnown RBP4.48□□□□□ -1.69
CBX3P9-201ENST00000402326 SMPD1P17405 629 aa4.48□□□□□ -1.69
CBX3P9-201ENST00000402326 SRPK2P78362 688 aaKnown RBP4.48□□□□□ -1.69
CBX3P9-201ENST00000402326 CDCA8Q53HL2 280 aa4.48□□□□□ -1.69
CBX3P9-201ENST00000402326 KANK4Q5T7N3 995 aaPredicted RBP4.48□□□□□ -1.69
CBX3P9-201ENST00000402326 CC2D2BQ6DHV5 1058 aa4.48□□□□□ -1.69
CBX3P9-201ENST00000402326 TRIM50Q86XT4 487 aa4.48□□□□□ -1.69
CBX3P9-201ENST00000402326 TMPRSS4Q9NRS4 437 aa4.48□□□□□ -1.69
CBX3P9-201ENST00000402326 RASA1P20936 1047 aa4.47□□□□□ -1.69
CBX3P9-201ENST00000402326 ATP1A2P50993 1020 aa4.47□□□□□ -1.69
CBX3P9-201ENST00000402326 ERVK-9P63128 1117 aa4.47□□□□□ -1.69
CBX3P9-201ENST00000402326 LARP1Q6PKG0 1096 aaKnown RBP4.47□□□□□ -1.69
CBX3P9-201ENST00000402326 ZNF784Q8NCA9 323 aaPredicted RBP4.47□□□□□ -1.69
CBX3P9-201ENST00000402326 IRF7Q92985 503 aa4.47□□□□□ -1.69
CBX3P9-201ENST00000402326 GOLGA2P5Q9HBQ8 144 aa4.47□□□□□ -1.69
CBX3P9-201ENST00000402326 CYLDQ9NQC7 956 aa4.47□□□□□ -1.69
CBX3P9-201ENST00000402326 AXIN1O15169 862 aa4.46□□□□□ -1.7
CBX3P9-201ENST00000402326 LILRA1O75019 489 aa4.46□□□□□ -1.7
CBX3P9-201ENST00000402326 ATG7O95352 703 aa4.46□□□□□ -1.7
CBX3P9-201ENST00000402326 ZIC2O95409 532 aaPredicted RBP4.46□□□□□ -1.7
CBX3P9-201ENST00000402326 SCTRP47872 440 aa4.46□□□□□ -1.7
CBX3P9-201ENST00000402326 WDR4P57081 412 aaKnown RBP4.46□□□□□ -1.7
CBX3P9-201ENST00000402326 GTF2IP78347 998 aa4.46□□□□□ -1.7
CBX3P9-201ENST00000402326 OGFOD1Q8N543 542 aa4.46□□□□□ -1.7
CBX3P9-201ENST00000402326 HPS1Q92902 700 aa4.46□□□□□ -1.7
CBX3P9-201ENST00000402326 KLF16Q9BXK1 252 aaPredicted RBP4.46□□□□□ -1.7
CBX3P9-201ENST00000402326 DNAAF2Q9NVR5 837 aaKnown RBP4.46□□□□□ -1.7
CBX3P9-201ENST00000402326 DNMT3AQ9Y6K1 912 aaPredicted RBP4.46□□□□□ -1.7
CBX3P9-201ENST00000402326 FAM196BA6NMK8 535 aa4.45□□□□□ -1.7
CBX3P9-201ENST00000402326 COBLO75128 1261 aa4.45□□□□□ -1.7
CBX3P9-201ENST00000402326 ADD1P35611 737 aaKnown RBP4.45□□□□□ -1.7
CBX3P9-201ENST00000402326 ELOAQ14241 798 aaKnown RBP4.45□□□□□ -1.7
CBX3P9-201ENST00000402326 CRTC2Q53ET0 693 aaPredicted RBP4.45□□□□□ -1.7
CBX3P9-201ENST00000402326 CYP2U1Q7Z449 544 aa4.45□□□□□ -1.7
CBX3P9-201ENST00000402326 LARGE2Q8N3Y3 721 aa4.45□□□□□ -1.7
CBX3P9-201ENST00000402326 RETREG2Q8NC44 543 aa4.45□□□□□ -1.7
CBX3P9-201ENST00000402326 ITPKCQ96DU7 683 aa4.45□□□□□ -1.7
CBX3P9-201ENST00000402326 OSBPL3Q9H4L5 887 aa4.45□□□□□ -1.7
CBX3P9-201ENST00000402326 RBM19Q9Y4C8 960 aaKnown RBP4.45□□□□□ -1.7
CBX3P9-201ENST00000402326 PCDHGA11Q9Y5H2 935 aa4.45□□□□□ -1.7
CBX3P9-201ENST00000402326 USP17L15C9J2P7 530 aa4.44□□□□□ -1.7
CBX3P9-201ENST00000402326 USP17L10C9JJH3 530 aa4.44□□□□□ -1.7
CBX3P9-201ENST00000402326 USP17L13C9JLJ4 530 aa4.44□□□□□ -1.7
CBX3P9-201ENST00000402326 USP17L12C9JPN9 530 aa4.44□□□□□ -1.7
CBX3P9-201ENST00000402326 USP17L11C9JVI0 530 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms