RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 PPIP5K1Q6PFW1 1433 aa20.95■□□□□ 0.94
PTPRA-205ENST00000399903 NCOA3Q9Y6Q9 1424 aa20.95■□□□□ 0.94
PTPRA-205ENST00000399903 SASS6Q6UVJ0 657 aa20.95■□□□□ 0.94
PTPRA-205ENST00000399903 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.94■□□□□ 0.94
PTPRA-205ENST00000399903 LMBRD1Q9NUN5 540 aa20.94■□□□□ 0.94
PTPRA-205ENST00000399903 PRR36Q9H6K5 1346 aa20.94■□□□□ 0.94
PTPRA-205ENST00000399903 SMAP1Q8IYB5 467 aaPredicted RBP20.94■□□□□ 0.94
PTPRA-205ENST00000399903 PHF23Q9BUL5 403 aaPredicted RBP20.94■□□□□ 0.94
PTPRA-205ENST00000399903 ZNF500O60304 480 aaPredicted RBP20.94■□□□□ 0.94
PTPRA-205ENST00000399903 ZBTB40Q9NUA8 1239 aa20.94■□□□□ 0.94
PTPRA-205ENST00000399903 C17orf53Q8N3J3 647 aaPredicted RBP20.93■□□□□ 0.94
PTPRA-205ENST00000399903 AGLP35573 1532 aa20.93■□□□□ 0.94
PTPRA-205ENST00000399903 ZNF445P59923 1031 aa20.93■□□□□ 0.94
PTPRA-205ENST00000399903 BMP2KLQ5H9B9 411 aa20.93■□□□□ 0.94
PTPRA-205ENST00000399903 CCDC39Q9UFE4 941 aa20.93■□□□□ 0.94
PTPRA-205ENST00000399903 ROBO2Q9HCK4 1378 aa20.92■□□□□ 0.94
PTPRA-205ENST00000399903 NUCB2P80303 420 aa20.92■□□□□ 0.94
PTPRA-205ENST00000399903 NSFL1CQ9UNZ2 370 aaKnown RBP20.92■□□□□ 0.94
PTPRA-205ENST00000399903 CCDC61Q9Y6R9 512 aa20.92■□□□□ 0.94
PTPRA-205ENST00000399903 KIF13AQ9H1H9 1805 aa20.92■□□□□ 0.94
PTPRA-205ENST00000399903 IQSEC2Q5JU85 1478 aa20.92■□□□□ 0.94
PTPRA-205ENST00000399903 SPDYE4A6NLX3 237 aa20.91■□□□□ 0.94
PTPRA-205ENST00000399903 IPO8O15397 1037 aaKnown RBP20.91■□□□□ 0.94
PTPRA-205ENST00000399903 TERF1P54274 439 aa20.91■□□□□ 0.94
PTPRA-205ENST00000399903 DCTN1Q14203 1278 aa20.91■□□□□ 0.94
PTPRA-205ENST00000399903 GPT2Q8TD30 523 aa20.91■□□□□ 0.94
PTPRA-205ENST00000399903 SPATA31D1Q6ZQQ2 1576 aa20.91■□□□□ 0.94
PTPRA-205ENST00000399903 TMEM63CQ9P1W3 806 aa20.91■□□□□ 0.94
PTPRA-205ENST00000399903 FAM83GA6ND36 823 aa20.9■□□□□ 0.94
PTPRA-205ENST00000399903 COG3Q96JB2 828 aa20.9■□□□□ 0.94
PTPRA-205ENST00000399903 MTERF4Q7Z6M4 381 aaKnown RBP20.89■□□□□ 0.94
PTPRA-205ENST00000399903 KIAA2012Q0VF49 1180 aa20.89■□□□□ 0.93
PTPRA-205ENST00000399903 NUTM2GQ5VZR2 741 aa20.89■□□□□ 0.93
PTPRA-205ENST00000399903 BCL11BQ9C0K0 894 aaPredicted RBP20.89■□□□□ 0.93
PTPRA-205ENST00000399903 TMEM2Q9UHN6 1383 aa20.89■□□□□ 0.93
PTPRA-205ENST00000399903 HDGFP51858 240 aaKnown RBP20.88■□□□□ 0.93
PTPRA-205ENST00000399903 CDC45O75419 566 aa20.88■□□□□ 0.93
PTPRA-205ENST00000399903 CCDC94Q9BW85 323 aaPredicted RBP20.88■□□□□ 0.93
PTPRA-205ENST00000399903 HS1BP3Q53T59 392 aa20.87■□□□□ 0.93
PTPRA-205ENST00000399903 AEBP1Q8IUX7 1158 aa20.87■□□□□ 0.93
PTPRA-205ENST00000399903 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.86■□□□□ 0.933e-6■■□□□ 11.9
PTPRA-205ENST00000399903 CCDC27Q2M243 656 aa20.86■□□□□ 0.93
PTPRA-205ENST00000399903 GDPD2Q9HCC8 539 aa20.86■□□□□ 0.93
PTPRA-205ENST00000399903 PPP4R3BQ5MIZ7 849 aa20.86■□□□□ 0.93
PTPRA-205ENST00000399903 AMOTL2Q9Y2J4 779 aa20.85■□□□□ 0.93
PTPRA-205ENST00000399903 LRSAM1Q6UWE0 723 aa20.85■□□□□ 0.93
PTPRA-205ENST00000399903 PDLIM2Q96JY6 352 aa20.85■□□□□ 0.93
PTPRA-205ENST00000399903 ACEP12821 1306 aa20.84■□□□□ 0.93
PTPRA-205ENST00000399903 RABEP1Q15276 862 aa20.84■□□□□ 0.93
PTPRA-205ENST00000399903 C16orf71Q8IYS4 520 aaPredicted RBP20.84■□□□□ 0.93
PTPRA-205ENST00000399903 COL3A1P02461 1466 aaPredicted RBP20.84■□□□□ 0.93
PTPRA-205ENST00000399903 TTC12Q9H892 705 aaPredicted RBP20.84■□□□□ 0.93
PTPRA-205ENST00000399903 EID1Q9Y6B2 187 aa20.83■□□□□ 0.93
PTPRA-205ENST00000399903 USP32Q8NFA0 1604 aa20.83■□□□□ 0.93
PTPRA-205ENST00000399903 CPS1P31327 1500 aa20.83■□□□□ 0.92
PTPRA-205ENST00000399903 TSPYL6Q8N831 410 aa20.83■□□□□ 0.92
PTPRA-205ENST00000399903 ST18O60284 1047 aa20.82■□□□□ 0.92
PTPRA-205ENST00000399903 FCHSD2O94868 740 aa20.81■□□□□ 0.92
PTPRA-205ENST00000399903 NRXN3Q9Y4C0 1643 aa20.81■□□□□ 0.92
PTPRA-205ENST00000399903 IL13P35225 146 aa20.81■□□□□ 0.92
PTPRA-205ENST00000399903 DMTNQ08495 405 aa20.81■□□□□ 0.92
PTPRA-205ENST00000399903 HSP90AB2PQ58FF8 381 aa20.81■□□□□ 0.92
PTPRA-205ENST00000399903 USP25Q9UHP3 1055 aa20.8■□□□□ 0.92
PTPRA-205ENST00000399903 REREQ9P2R6 1566 aa20.8■□□□□ 0.92
PTPRA-205ENST00000399903 IBTKQ9P2D0 1353 aaPredicted RBP20.8■□□□□ 0.92
PTPRA-205ENST00000399903 ZSCAN20P17040 1043 aaPredicted RBP20.8■□□□□ 0.92
PTPRA-205ENST00000399903 TSPY26PQ9H489 355 aa20.8■□□□□ 0.92
PTPRA-205ENST00000399903 SULT6B1Q6IMI4 303 aa20.79■□□□□ 0.92
PTPRA-205ENST00000399903 BBXQ8WY36 941 aaPredicted RBP20.79■□□□□ 0.92
PTPRA-205ENST00000399903 GSPT1P15170 499 aaKnown RBP20.79■□□□□ 0.92
PTPRA-205ENST00000399903 C14orf37Q86TY3 774 aa20.79■□□□□ 0.92
PTPRA-205ENST00000399903 ADAMTS13Q76LX8 1427 aa20.78■□□□□ 0.92
PTPRA-205ENST00000399903 KRT24Q2M2I5 525 aa20.78■□□□□ 0.92
PTPRA-205ENST00000399903 NGDNQ8NEJ9 315 aaKnown RBP20.78■□□□□ 0.92
PTPRA-205ENST00000399903 OTUD7AQ8TE49 926 aaPredicted RBP20.78■□□□□ 0.92
PTPRA-205ENST00000399903 GCC1Q96CN9 775 aa20.78■□□□□ 0.92
PTPRA-205ENST00000399903 PNPLA6Q8IY17 1366 aa20.78■□□□□ 0.92
PTPRA-205ENST00000399903 ATP2B3Q16720 1220 aa20.77■□□□□ 0.92
PTPRA-205ENST00000399903 SMARCA5O60264 1052 aaPredicted RBP20.77■□□□□ 0.92
PTPRA-205ENST00000399903 FGD1P98174 961 aa20.77■□□□□ 0.92
PTPRA-205ENST00000399903 MYRIPQ8NFW9 859 aa20.77■□□□□ 0.92
PTPRA-205ENST00000399903 TTC21BQ7Z4L5 1316 aa20.77■□□□□ 0.91
PTPRA-205ENST00000399903 MCM5P33992 734 aa20.76■□□□□ 0.91
PTPRA-205ENST00000399903 MAPK8IP2Q13387 824 aaPredicted RBP20.76■□□□□ 0.91
PTPRA-205ENST00000399903 NFE2L2Q16236 605 aa20.76■□□□□ 0.91
PTPRA-205ENST00000399903 ZDHHC9Q9Y397 364 aa20.76■□□□□ 0.91
PTPRA-205ENST00000399903 CPSF1Q10570 1443 aaKnown RBP20.76■□□□□ 0.91
PTPRA-205ENST00000399903 NEK4P51957 841 aa20.76■□□□□ 0.91
PTPRA-205ENST00000399903 EDC4Q6P2E9 1401 aaKnown RBP20.76■□□□□ 0.91
PTPRA-205ENST00000399903 PTPRUQ92729 1446 aa20.75■□□□□ 0.91
PTPRA-205ENST00000399903 LRRC7Q96NW7 1537 aa20.75■□□□□ 0.91
PTPRA-205ENST00000399903 NOLC1Q14978 699 aaKnown RBP eCLIP20.75■□□□□ 0.91
PTPRA-205ENST00000399903 KIF3AQ9Y496 699 aa20.75■□□□□ 0.91
PTPRA-205ENST00000399903 CT47B1P0C2W7 299 aaPredicted RBP20.75■□□□□ 0.91
PTPRA-205ENST00000399903 ZNF710Q8N1W2 664 aa20.75■□□□□ 0.91
PTPRA-205ENST00000399903 MIS18AQ9NYP9 233 aa20.75■□□□□ 0.91
PTPRA-205ENST00000399903 SETD1AO15047 1707 aaKnown RBP20.74■□□□□ 0.91
PTPRA-205ENST00000399903 MCM10Q7L590 875 aa20.74■□□□□ 0.91
PTPRA-205ENST00000399903 MAP2P11137 1827 aaKnown RBP20.74■□□□□ 0.91
PTPRA-205ENST00000399903 ATP7BP35670 1465 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms