RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 ITSN2Q9NZM3 1697 aa6□□□□□ -1.45
SMAD4-202ENST00000398417 EIF2AK4Q9P2K8 1649 aaKnown RBP5.99□□□□□ -1.45
SMAD4-202ENST00000398417 LRRFIP2Q9Y608 721 aaKnown RBP5.99□□□□□ -1.45
SMAD4-202ENST00000398417 IFIT2P09913 472 aaKnown RBP5.99□□□□□ -1.45
SMAD4-202ENST00000398417 C1orf141Q5JVX7 400 aa5.99□□□□□ -1.45
SMAD4-202ENST00000398417 R3HCC1Q9Y3T6 440 aaKnown RBP5.99□□□□□ -1.45
SMAD4-202ENST00000398417 RAB3GAP1Q15042 981 aa5.99□□□□□ -1.45
SMAD4-202ENST00000398417 TAF7Q15545 349 aaPredicted RBP5.99□□□□□ -1.45
SMAD4-202ENST00000398417 CHL1O00533 1208 aa5.99□□□□□ -1.45
SMAD4-202ENST00000398417 GAS2L3Q86XJ1 694 aa5.99□□□□□ -1.45
SMAD4-202ENST00000398417 DIAPH3Q9NSV4 1193 aa5.99□□□□□ -1.45
SMAD4-202ENST00000398417 ABCC4O15439 1325 aa5.99□□□□□ -1.45
SMAD4-202ENST00000398417 GNAT3A8MTJ3 354 aa5.99□□□□□ -1.45
SMAD4-202ENST00000398417 PDE1AP54750 535 aa5.99□□□□□ -1.45
SMAD4-202ENST00000398417 ATP8B2P98198 1209 aa5.99□□□□□ -1.45
SMAD4-202ENST00000398417 FLIIQ13045 1269 aa5.99□□□□□ -1.45
SMAD4-202ENST00000398417 ZNF330Q9Y3S2 320 aaPredicted RBP5.99□□□□□ -1.45
SMAD4-202ENST00000398417 FOSBP53539 338 aa5.98□□□□□ -1.45
SMAD4-202ENST00000398417 GDPD2Q9HCC8 539 aa5.98□□□□□ -1.45
SMAD4-202ENST00000398417 NASPP49321 788 aaPredicted RBP5.98□□□□□ -1.45
SMAD4-202ENST00000398417 ZNF530Q6P9A1 599 aaPredicted RBP5.98□□□□□ -1.45
SMAD4-202ENST00000398417 PSME1Q06323 249 aa5.98□□□□□ -1.45
SMAD4-202ENST00000398417 JARID2Q92833 1246 aaPredicted RBP5.98□□□□□ -1.45
SMAD4-202ENST00000398417 LRRC59Q96AG4 307 aaKnown RBP5.98□□□□□ -1.45
SMAD4-202ENST00000398417 CHMP3Q9Y3E7 222 aa5.98□□□□□ -1.45
SMAD4-202ENST00000398417 MAP3K19Q56UN5 1328 aa5.98□□□□□ -1.45
SMAD4-202ENST00000398417 PPP6R1Q9UPN7 881 aa5.98□□□□□ -1.45
SMAD4-202ENST00000398417 MPRIPQ6WCQ1 1025 aa5.98□□□□□ -1.45
SMAD4-202ENST00000398417 TMX3Q96JJ7 454 aa5.98□□□□□ -1.45
SMAD4-202ENST00000398417 SIL1Q9H173 461 aa5.98□□□□□ -1.45
SMAD4-202ENST00000398417 VPS37CA5D8V6 355 aaPredicted RBP5.97□□□□□ -1.45
SMAD4-202ENST00000398417 RBM10P98175 930 aaKnown RBP5.97□□□□□ -1.45
SMAD4-202ENST00000398417 CCDC173Q0VFZ6 552 aa5.97□□□□□ -1.45
SMAD4-202ENST00000398417 CWC22Q9HCG8 908 aaKnown RBP5.97□□□□□ -1.45
SMAD4-202ENST00000398417 PHF8Q9UPP1 1060 aa5.97□□□□□ -1.45
SMAD4-202ENST00000398417 TNRQ92752 1358 aa5.97□□□□□ -1.45
SMAD4-202ENST00000398417 C9orf78Q9NZ63 289 aaPredicted RBP5.97□□□□□ -1.45
SMAD4-202ENST00000398417 SMC3Q9UQE7 1217 aa5.97□□□□□ -1.45
SMAD4-202ENST00000398417 SRGAP3O43295 1099 aa5.97□□□□□ -1.45
SMAD4-202ENST00000398417 HSP90B1P14625 803 aaKnown RBP5.97□□□□□ -1.45
SMAD4-202ENST00000398417 ZFYVE16Q7Z3T8 1539 aa5.97□□□□□ -1.45
SMAD4-202ENST00000398417 HOXC9P31274 260 aa5.97□□□□□ -1.45
SMAD4-202ENST00000398417 CWC27Q6UX04 472 aaKnown RBP5.97□□□□□ -1.45
SMAD4-202ENST00000398417 KCNQ3O43525 872 aa5.97□□□□□ -1.45
SMAD4-202ENST00000398417 LTKP29376 864 aa5.97□□□□□ -1.45
SMAD4-202ENST00000398417 PLEKHO1Q53GL0 409 aaPredicted RBP5.97□□□□□ -1.45
SMAD4-202ENST00000398417 PRPF40BQ6NWY9 871 aaKnown RBP5.97□□□□□ -1.45
SMAD4-202ENST00000398417 CCDC8Q9H0W5 538 aaPredicted RBP5.97□□□□□ -1.45
SMAD4-202ENST00000398417 ESPNB1AK53 854 aa5.97□□□□□ -1.45
SMAD4-202ENST00000398417 FGD1P98174 961 aa5.97□□□□□ -1.45
SMAD4-202ENST00000398417 NLRP2Q9NX02 1062 aa5.97□□□□□ -1.45
SMAD4-202ENST00000398417 MSH6P52701 1360 aa5.97□□□□□ -1.45
SMAD4-202ENST00000398417 G3BP1Q13283 466 aaKnown RBP eCLIP5.97□□□□□ -1.45
SMAD4-202ENST00000398417 PAXIP1Q6ZW49 1069 aaPredicted RBP5.97□□□□□ -1.45
SMAD4-202ENST00000398417 RIC3Q7Z5B4 369 aa5.97□□□□□ -1.45
SMAD4-202ENST00000398417 ESYT1Q9BSJ8 1104 aa5.97□□□□□ -1.45
SMAD4-202ENST00000398417 GOLGA6L4A6NEF3 574 aa5.96□□□□□ -1.46
SMAD4-202ENST00000398417 SPG7Q9UQ90 795 aa5.96□□□□□ -1.46
SMAD4-202ENST00000398417 PTPRCP08575 1304 aa5.96□□□□□ -1.46
SMAD4-202ENST00000398417 STK3Q13188 491 aa5.96□□□□□ -1.46
SMAD4-202ENST00000398417 PKP1Q13835 747 aa5.96□□□□□ -1.46
SMAD4-202ENST00000398417 CCDC83Q8IWF9 413 aa5.96□□□□□ -1.46
SMAD4-202ENST00000398417 TSPY26PQ9H489 355 aa5.96□□□□□ -1.46
SMAD4-202ENST00000398417 PA2G4Q9UQ80 394 aaKnown RBP5.96□□□□□ -1.46
SMAD4-202ENST00000398417 CPA1P15085 419 aa5.96□□□□□ -1.46
SMAD4-202ENST00000398417 RHPN1Q8TCX5 695 aa5.96□□□□□ -1.46
SMAD4-202ENST00000398417 LGR6Q9HBX8 967 aa5.96□□□□□ -1.46
SMAD4-202ENST00000398417 ZFYVE9O95405 1425 aa5.96□□□□□ -1.46
SMAD4-202ENST00000398417 SYCE3A1L190 88 aa5.96□□□□□ -1.46
SMAD4-202ENST00000398417 ZSCAN23Q3MJ62 389 aa5.96□□□□□ -1.46
SMAD4-202ENST00000398417 CNTROBQ8N137 903 aa5.96□□□□□ -1.46
SMAD4-202ENST00000398417 DNAJC2Q99543 621 aaKnown RBP5.96□□□□□ -1.46
SMAD4-202ENST00000398417 FSD1Q9BTV5 496 aa5.96□□□□□ -1.46
SMAD4-202ENST00000398417 RBSNQ9H1K0 784 aa5.96□□□□□ -1.46
SMAD4-202ENST00000398417 PNMA6EA0A0J9YXQ4 647 aa5.96□□□□□ -1.46
SMAD4-202ENST00000398417 PALD1Q9ULE6 856 aa5.96□□□□□ -1.46
SMAD4-202ENST00000398417 HSP90AB4PQ58FF6 505 aa5.95□□□□□ -1.46
SMAD4-202ENST00000398417 PPP1R42Q7Z4L9 355 aa5.95□□□□□ -1.46
SMAD4-202ENST00000398417 DNAAF4Q8WXU2 420 aa5.95□□□□□ -1.46
SMAD4-202ENST00000398417 JAKMIP1Q96N16 626 aaKnown RBP5.95□□□□□ -1.46
SMAD4-202ENST00000398417 ZC3H6P61129 1189 aaKnown RBP5.95□□□□□ -1.46
SMAD4-202ENST00000398417 PDRG1Q9NUG6 133 aa5.95□□□□□ -1.46
SMAD4-202ENST00000398417 ZMYM3Q14202 1370 aa5.95□□□□□ -1.46
SMAD4-202ENST00000398417 PLEKHG3A1L390 1219 aa5.95□□□□□ -1.46
SMAD4-202ENST00000398417 KDM4AO75164 1064 aa5.95□□□□□ -1.46
SMAD4-202ENST00000398417 AEBP2Q6ZN18 517 aaPredicted RBP5.95□□□□□ -1.46
SMAD4-202ENST00000398417 PKNOX2Q96KN3 472 aa5.95□□□□□ -1.46
SMAD4-202ENST00000398417 MLH3Q9UHC1 1453 aa5.95□□□□□ -1.46
SMAD4-202ENST00000398417 ADCY10Q96PN6 1610 aa5.95□□□□□ -1.46
SMAD4-202ENST00000398417 THEMISQ8N1K5 641 aaPredicted RBP5.95□□□□□ -1.46
SMAD4-202ENST00000398417 SIRT1Q96EB6 747 aa5.95□□□□□ -1.46
SMAD4-202ENST00000398417 BTBD11A6QL63 1104 aa5.95□□□□□ -1.46
SMAD4-202ENST00000398417 AACSQ86V21 672 aa5.95□□□□□ -1.46
SMAD4-202ENST00000398417 FIBPO43427 364 aa5.95□□□□□ -1.46
SMAD4-202ENST00000398417 CLSTN1O94985 981 aa5.95□□□□□ -1.46
SMAD4-202ENST00000398417 KLHL40Q2TBA0 621 aa5.95□□□□□ -1.46
SMAD4-202ENST00000398417 SYAP1Q96A49 352 aaPredicted RBP5.95□□□□□ -1.46
SMAD4-202ENST00000398417 KCNA6P17658 529 aa5.94□□□□□ -1.46
SMAD4-202ENST00000398417 CHMLP26374 656 aa5.94□□□□□ -1.46
SMAD4-202ENST00000398417 PPP4R4Q6NUP7 873 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms