RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 SKOR2Q2VWA4 1001 aaPredicted RBP12.93□□□□□ -0.34
ACTN1-203ENST00000394419 ABCC4O15439 1325 aa12.93□□□□□ -0.34
ACTN1-203ENST00000394419 FAM135BQ49AJ0 1406 aa12.93□□□□□ -0.34
ACTN1-203ENST00000394419 LRRC7Q96NW7 1537 aa12.93□□□□□ -0.34
ACTN1-203ENST00000394419 ABTB2Q8N961 1025 aa12.93□□□□□ -0.34
ACTN1-203ENST00000394419 PRR36Q9H6K5 1346 aa12.93□□□□□ -0.34
ACTN1-203ENST00000394419 GNAI2P04899 355 aa12.93□□□□□ -0.34
ACTN1-203ENST00000394419 ZNF853P0CG23 659 aa12.93□□□□□ -0.34
ACTN1-203ENST00000394419 AMOTL2Q9Y2J4 779 aa12.93□□□□□ -0.34
ACTN1-203ENST00000394419 MYO3AQ8NEV4 1616 aa12.93□□□□□ -0.34
ACTN1-203ENST00000394419 ZC3H13Q5T200 1668 aaKnown RBP12.93□□□□□ -0.34
ACTN1-203ENST00000394419 EDC4Q6P2E9 1401 aaKnown RBP12.92□□□□□ -0.34
ACTN1-203ENST00000394419 PIK3C2BO00750 1634 aa12.92□□□□□ -0.34
ACTN1-203ENST00000394419 MCCP23508 829 aa12.92□□□□□ -0.34
ACTN1-203ENST00000394419 CIZ1Q9ULV3 898 aaPredicted RBP12.92□□□□□ -0.34
ACTN1-203ENST00000394419 ARHGAP31Q2M1Z3 1444 aa12.92□□□□□ -0.34
ACTN1-203ENST00000394419 CD163L1Q9NR16 1453 aa12.92□□□□□ -0.34
ACTN1-203ENST00000394419 CHAMP1Q96JM3 812 aa12.92□□□□□ -0.34
ACTN1-203ENST00000394419 MSH6P52701 1360 aa12.91□□□□□ -0.34
ACTN1-203ENST00000394419 NEURL4Q96JN8 1562 aa12.91□□□□□ -0.34
ACTN1-203ENST00000394419 RAB3GAP1Q15042 981 aa12.91□□□□□ -0.34
ACTN1-203ENST00000394419 ARHGEF28Q8N1W1 1705 aaKnown RBP12.91□□□□□ -0.34
ACTN1-203ENST00000394419 ZGPATQ8N5A5 531 aaKnown RBP12.91□□□□□ -0.34
ACTN1-203ENST00000394419 UPF3BQ9BZI7 483 aaKnown RBP12.91□□□□□ -0.34
ACTN1-203ENST00000394419 IFT172Q9UG01 1749 aa12.91□□□□□ -0.34
ACTN1-203ENST00000394419 ALKQ9UM73 1620 aa12.91□□□□□ -0.34
ACTN1-203ENST00000394419 ZMYM3Q14202 1370 aa12.91□□□□□ -0.34
ACTN1-203ENST00000394419 CHL1O00533 1208 aa12.91□□□□□ -0.34
ACTN1-203ENST00000394419 ERC2O15083 957 aa12.91□□□□□ -0.34
ACTN1-203ENST00000394419 DIP2CQ9Y2E4 1556 aa12.91□□□□□ -0.34
ACTN1-203ENST00000394419 MAP3K19Q56UN5 1328 aa12.9□□□□□ -0.34
ACTN1-203ENST00000394419 BAG4O95429 457 aaKnown RBP12.9□□□□□ -0.34
ACTN1-203ENST00000394419 NASPP49321 788 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-203ENST00000394419 CFAP74Q9C0B2 1584 aa12.9□□□□□ -0.34
ACTN1-203ENST00000394419 SURF6O75683 361 aaKnown RBP12.9□□□□□ -0.34
ACTN1-203ENST00000394419 NUCB2P80303 420 aa12.9□□□□□ -0.34
ACTN1-203ENST00000394419 PKP1Q13835 747 aa12.9□□□□□ -0.34
ACTN1-203ENST00000394419 TSPOAP1O95153 1857 aa12.9□□□□□ -0.34
ACTN1-203ENST00000394419 PLCB2Q00722 1185 aa12.9□□□□□ -0.34
ACTN1-203ENST00000394419 NUTM1Q86Y26 1132 aa12.9□□□□□ -0.34
ACTN1-203ENST00000394419 SIGLEC1Q9BZZ2 1709 aa12.9□□□□□ -0.35
ACTN1-203ENST00000394419 UBTFL1P0CB47 393 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-203ENST00000394419 HDGFL1Q5TGJ6 251 aa12.89□□□□□ -0.35
ACTN1-203ENST00000394419 GAS2L3Q86XJ1 694 aa12.89□□□□□ -0.35
ACTN1-203ENST00000394419 KIF2CQ99661 725 aa12.89□□□□□ -0.35
ACTN1-203ENST00000394419 LRRCC1Q9C099 1032 aa12.89□□□□□ -0.35
ACTN1-203ENST00000394419 ARHGEF40Q8TER5 1519 aa12.89□□□□□ -0.35
ACTN1-203ENST00000394419 ANXA1P04083 346 aa12.89□□□□□ -0.35
ACTN1-203ENST00000394419 LTKP29376 864 aa12.89□□□□□ -0.35
ACTN1-203ENST00000394419 CCT4P50991 539 aaKnown RBP12.89□□□□□ -0.35
ACTN1-203ENST00000394419 CCDC30Q5VVM6 783 aa12.89□□□□□ -0.35
ACTN1-203ENST00000394419 RNF214Q8ND24 703 aa12.89□□□□□ -0.35
ACTN1-203ENST00000394419 EYA1Q99502 592 aa12.89□□□□□ -0.35
ACTN1-203ENST00000394419 LARP6Q9BRS8 491 aaKnown RBP12.89□□□□□ -0.35
ACTN1-203ENST00000394419 USP26Q9BXU7 913 aa12.89□□□□□ -0.35
ACTN1-203ENST00000394419 LRRFIP2Q9Y608 721 aaKnown RBP12.89□□□□□ -0.35
ACTN1-203ENST00000394419 COL3A1P02461 1466 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-203ENST00000394419 FLIIQ13045 1269 aa12.89□□□□□ -0.35
ACTN1-203ENST00000394419 PTMSP20962 102 aa12.88□□□□□ -0.35
ACTN1-203ENST00000394419 PTMAP06454 111 aaKnown RBP12.88□□□□□ -0.35
ACTN1-203ENST00000394419 MSNP26038 577 aaKnown RBP12.87□□□□□ -0.35
ACTN1-203ENST00000394419 PDE1AP54750 535 aa12.87□□□□□ -0.35
ACTN1-203ENST00000394419 BRPF1P55201 1214 aaPredicted RBP12.87□□□□□ -0.35
ACTN1-203ENST00000394419 ESPNB1AK53 854 aa12.87□□□□□ -0.35
ACTN1-203ENST00000394419 DTNBO60941 627 aa12.87□□□□□ -0.35
ACTN1-203ENST00000394419 GNAI3P08754 354 aa12.87□□□□□ -0.35
ACTN1-203ENST00000394419 KCNJ4P48050 445 aa12.87□□□□□ -0.35
ACTN1-203ENST00000394419 RBM27Q9P2N5 1060 aaKnown RBP12.87□□□□□ -0.35
ACTN1-203ENST00000394419 PTPRCP08575 1304 aa12.87□□□□□ -0.35
ACTN1-203ENST00000394419 XPCQ01831 940 aaPredicted RBP12.87□□□□□ -0.35
ACTN1-203ENST00000394419 GNAT3A8MTJ3 354 aa12.86□□□□□ -0.35
ACTN1-203ENST00000394419 MYO5BQ9ULV0 1848 aa12.86□□□□□ -0.35
ACTN1-203ENST00000394419 TNRQ92752 1358 aa12.86□□□□□ -0.35
ACTN1-203ENST00000394419 ROBO2Q9HCK4 1378 aa12.86□□□□□ -0.35
ACTN1-203ENST00000394419 TEFQ10587 303 aa12.86□□□□□ -0.35
ACTN1-203ENST00000394419 KIAA1211Q6ZU35 1233 aa12.86□□□□□ -0.35
ACTN1-203ENST00000394419 MPNDQ8N594 471 aa12.86□□□□□ -0.35
ACTN1-203ENST00000394419 A2ML1A8K2U0 1454 aa12.86□□□□□ -0.35
ACTN1-203ENST00000394419 MX1P20591 662 aa12.86□□□□□ -0.35
ACTN1-203ENST00000394419 PPP6R1Q9UPN7 881 aa12.86□□□□□ -0.35
ACTN1-203ENST00000394419 PNMA6EA0A0J9YXQ4 647 aa12.85□□□□□ -0.35
ACTN1-203ENST00000394419 GDPD2Q9HCC8 539 aa12.85□□□□□ -0.35
ACTN1-203ENST00000394419 RTL1A6NKG5 1358 aa12.85□□□□□ -0.35
ACTN1-203ENST00000394419 ADGRB2O60241 1585 aa12.85□□□□□ -0.35
ACTN1-203ENST00000394419 FSD2A1L4K1 749 aa12.85□□□□□ -0.35
ACTN1-203ENST00000394419 ATP7BP35670 1465 aa12.84□□□□□ -0.35
ACTN1-203ENST00000394419 SRGAP3O43295 1099 aa12.84□□□□□ -0.35
ACTN1-203ENST00000394419 TRHP20396 242 aaPredicted RBP12.84□□□□□ -0.35
ACTN1-203ENST00000394419 DDX54Q8TDD1 881 aaKnown RBP12.84□□□□□ -0.35
ACTN1-203ENST00000394419 MAP2P11137 1827 aaKnown RBP12.84□□□□□ -0.35
ACTN1-203ENST00000394419 PTCH1Q13635 1447 aa12.84□□□□□ -0.35
ACTN1-203ENST00000394419 AIMP1Q12904 312 aaKnown RBP12.84□□□□□ -0.35
ACTN1-203ENST00000394419 PHAXQ9H814 394 aaKnown RBP12.84□□□□□ -0.35
ACTN1-203ENST00000394419 PSME1Q06323 249 aa12.83□□□□□ -0.35
ACTN1-203ENST00000394419 PIK3R4Q99570 1358 aa12.83□□□□□ -0.36
ACTN1-203ENST00000394419 CPS1P31327 1500 aa12.83□□□□□ -0.36
ACTN1-203ENST00000394419 C9orf78Q9NZ63 289 aaPredicted RBP12.83□□□□□ -0.36
ACTN1-203ENST00000394419 CCDC9Q9Y3X0 531 aaKnown RBP12.83□□□□□ -0.36
ACTN1-203ENST00000394419 MED14O60244 1454 aa12.83□□□□□ -0.36
ACTN1-203ENST00000394419 ARID3AQ99856 593 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms