RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 ANKRD44Q8N8A2 993 aa25.24■■□□□ 1.63
CLN5-201ENST00000377453 MRE11P49959 708 aa25.23■■□□□ 1.63
CLN5-201ENST00000377453 PKP1Q13835 747 aa25.23■■□□□ 1.63
CLN5-201ENST00000377453 GBP4Q96PP9 640 aa25.23■■□□□ 1.63
CLN5-201ENST00000377453 ESF1Q9H501 851 aaKnown RBP25.23■■□□□ 1.63
CLN5-201ENST00000377453 ACEP12821 1306 aa25.23■■□□□ 1.63
CLN5-201ENST00000377453 TTC21BQ7Z4L5 1316 aa25.23■■□□□ 1.63
CLN5-201ENST00000377453 SDSP20132 328 aa25.22■■□□□ 1.63
CLN5-201ENST00000377453 SPATA31D1Q6ZQQ2 1576 aa25.22■■□□□ 1.63
CLN5-201ENST00000377453 CHL1O00533 1208 aa25.22■■□□□ 1.63
CLN5-201ENST00000377453 SLC4A2P04920 1241 aa25.22■■□□□ 1.63
CLN5-201ENST00000377453 CIZ1Q9ULV3 898 aaPredicted RBP25.22■■□□□ 1.63
CLN5-201ENST00000377453 CHAMP1Q96JM3 812 aa25.21■■□□□ 1.63
CLN5-201ENST00000377453 NECTIN2Q92692 538 aa25.2■■□□□ 1.63
CLN5-201ENST00000377453 RTL1A6NKG5 1358 aa25.19■■□□□ 1.62
CLN5-201ENST00000377453 USP26Q9BXU7 913 aa25.19■■□□□ 1.62
CLN5-201ENST00000377453 AK9Q5TCS8 1911 aa25.19■■□□□ 1.62
CLN5-201ENST00000377453 CEBPAP49715 358 aaPredicted RBP25.18■■□□□ 1.62
CLN5-201ENST00000377453 ERBB4Q15303 1308 aa25.18■■□□□ 1.62
CLN5-201ENST00000377453 ZGPATQ8N5A5 531 aaKnown RBP25.16■■□□□ 1.62
CLN5-201ENST00000377453 SLC26A8Q96RN1 970 aa25.16■■□□□ 1.62
CLN5-201ENST00000377453 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.16■■□□□ 1.62
CLN5-201ENST00000377453 MAP3K19Q56UN5 1328 aa25.16■■□□□ 1.62
CLN5-201ENST00000377453 MON2Q7Z3U7 1717 aa25.16■■□□□ 1.62
CLN5-201ENST00000377453 TRHP20396 242 aaPredicted RBP25.16■■□□□ 1.62
CLN5-201ENST00000377453 C3P01024 1663 aa25.15■■□□□ 1.62
CLN5-201ENST00000377453 BAG4O95429 457 aaKnown RBP25.15■■□□□ 1.62
CLN5-201ENST00000377453 MTHFSDQ2M296 383 aaKnown RBP25.15■■□□□ 1.62
CLN5-201ENST00000377453 EXOC6BQ9Y2D4 811 aa25.14■■□□□ 1.62
CLN5-201ENST00000377453 AGLP35573 1532 aa25.14■■□□□ 1.61
CLN5-201ENST00000377453 FOXD4L5Q5VV16 416 aaPredicted RBP25.14■■□□□ 1.61
CLN5-201ENST00000377453 MCTP1Q6DN14 999 aa25.14■■□□□ 1.61
CLN5-201ENST00000377453 FOXD4L4Q8WXT5 416 aaPredicted RBP25.14■■□□□ 1.61
CLN5-201ENST00000377453 PRKCSHP14314 528 aaPredicted RBP25.13■■□□□ 1.61
CLN5-201ENST00000377453 TSPYL4Q9UJ04 414 aa25.13■■□□□ 1.61
CLN5-201ENST00000377453 RPAP2Q8IXW5 612 aaPredicted RBP25.13■■□□□ 1.61
CLN5-201ENST00000377453 RABEP1Q15276 862 aa25.12■■□□□ 1.61
CLN5-201ENST00000377453 DDX49Q9Y6V7 483 aaKnown RBP25.12■■□□□ 1.61
CLN5-201ENST00000377453 NCLP19338 710 aaKnown RBP25.12■■□□□ 1.61
CLN5-201ENST00000377453 RIMS1Q86UR5 1692 aaKnown RBP25.12■■□□□ 1.61
CLN5-201ENST00000377453 LTKP29376 864 aa25.11■■□□□ 1.61
CLN5-201ENST00000377453 PEAK1Q9H792 1746 aa25.11■■□□□ 1.61
CLN5-201ENST00000377453 NUTM2GQ5VZR2 741 aa25.11■■□□□ 1.61
CLN5-201ENST00000377453 NAP1L5Q96NT1 182 aaPredicted RBP25.11■■□□□ 1.61
CLN5-201ENST00000377453 CRB1P82279 1406 aa25.11■■□□□ 1.61
CLN5-201ENST00000377453 PPP6R1Q9UPN7 881 aa25.1■■□□□ 1.61
CLN5-201ENST00000377453 KIF24Q5T7B8 1368 aa25.1■■□□□ 1.61
CLN5-201ENST00000377453 ITSN1Q15811 1721 aa25.09■■□□□ 1.61
CLN5-201ENST00000377453 OVOS2A0A0J9YW53 1432 aa25.08■■□□□ 1.61
CLN5-201ENST00000377453 OVOS2Q6IE36 1432 aa25.08■■□□□ 1.61
CLN5-201ENST00000377453 AKAP12Q02952 1782 aa25.08■■□□□ 1.61
CLN5-201ENST00000377453 REREQ9P2R6 1566 aa25.08■■□□□ 1.61
CLN5-201ENST00000377453 NOL8Q76FK4 1167 aaKnown RBP25.08■■□□□ 1.61
CLN5-201ENST00000377453 NRKQ7Z2Y5 1582 aa25.06■■□□□ 1.6
CLN5-201ENST00000377453 PTPRCP08575 1304 aa25.06■■□□□ 1.6
CLN5-201ENST00000377453 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.06■■□□□ 1.6
CLN5-201ENST00000377453 TECPR2O15040 1411 aa25.06■■□□□ 1.6
CLN5-201ENST00000377453 CLCN1P35523 988 aa25.06■■□□□ 1.6
CLN5-201ENST00000377453 RTF1Q92541 710 aaKnown RBP25.06■■□□□ 1.6
CLN5-201ENST00000377453 KIAA0232Q92628 1395 aa25.06■■□□□ 1.6
CLN5-201ENST00000377453 USP6P35125 1406 aa25.05■■□□□ 1.6
CLN5-201ENST00000377453 SKOR2Q2VWA4 1001 aaPredicted RBP25.05■■□□□ 1.6
CLN5-201ENST00000377453 TNRQ92752 1358 aa25.05■■□□□ 1.6
CLN5-201ENST00000377453 CAVIN1Q6NZI2 390 aaKnown RBP25.05■■□□□ 1.6
CLN5-201ENST00000377453 TMEM2Q9UHN6 1383 aa25.05■■□□□ 1.6
CLN5-201ENST00000377453 ADAMTS13Q76LX8 1427 aa25.05■■□□□ 1.6
CLN5-201ENST00000377453 ESPNB1AK53 854 aa25.04■■□□□ 1.6
CLN5-201ENST00000377453 PDE1AP54750 535 aa25.04■■□□□ 1.6
CLN5-201ENST00000377453 EYA1Q99502 592 aa25.04■■□□□ 1.6
CLN5-201ENST00000377453 RBM27Q9P2N5 1060 aaKnown RBP25.04■■□□□ 1.6
CLN5-201ENST00000377453 PNMA6EA0A0J9YXQ4 647 aa25.04■■□□□ 1.6
CLN5-201ENST00000377453 GOLGA6L22H0YM25 854 aa25.03■■□□□ 1.6
CLN5-201ENST00000377453 LTV1Q96GA3 475 aaPredicted RBP25.03■■□□□ 1.6
CLN5-201ENST00000377453 ZDHHC9Q9Y397 364 aa25.03■■□□□ 1.6
CLN5-201ENST00000377453 PLEKHG3A1L390 1219 aa25.02■■□□□ 1.6
CLN5-201ENST00000377453 AMPHP49418 695 aa25.02■■□□□ 1.6
CLN5-201ENST00000377453 CASC1Q6TDU7 716 aa25.02■■□□□ 1.6
CLN5-201ENST00000377453 SIRT1Q96EB6 747 aa25.01■■□□□ 1.59
CLN5-201ENST00000377453 TRIM44Q96DX7 344 aaPredicted RBP25.01■■□□□ 1.59
CLN5-201ENST00000377453 ERC2O15083 957 aa25■■□□□ 1.59
CLN5-201ENST00000377453 CYP2E1P05181 493 aaPredicted RBP25■■□□□ 1.59
CLN5-201ENST00000377453 FKBP5Q13451 457 aaPredicted RBP25■■□□□ 1.59
CLN5-201ENST00000377453 KLHL40Q2TBA0 621 aa25■■□□□ 1.59
CLN5-201ENST00000377453 LMBRD1Q9NUN5 540 aa25■■□□□ 1.59
CLN5-201ENST00000377453 PRPF40AO75400 957 aaKnown RBP25■■□□□ 1.59
CLN5-201ENST00000377453 HDGFP51858 240 aaKnown RBP25■■□□□ 1.59
CLN5-201ENST00000377453 PALD1Q9ULE6 856 aa25■■□□□ 1.59
CLN5-201ENST00000377453 CEP170BQ9Y4F5 1589 aaPredicted RBP25■■□□□ 1.59
CLN5-201ENST00000377453 NGDNQ8NEJ9 315 aaKnown RBP24.99■■□□□ 1.59
CLN5-201ENST00000377453 PTPRUQ92729 1446 aa24.99■■□□□ 1.59
CLN5-201ENST00000377453 NASPP49321 788 aaPredicted RBP24.99■■□□□ 1.59
CLN5-201ENST00000377453 RILPL2Q969X0 211 aa24.99■■□□□ 1.59
CLN5-201ENST00000377453 ST18O60284 1047 aa24.98■■□□□ 1.59
CLN5-201ENST00000377453 HMMRO75330 724 aa24.98■■□□□ 1.59
CLN5-201ENST00000377453 NEK4P51957 841 aa24.98■■□□□ 1.59
CLN5-201ENST00000377453 HAP1P54257 671 aaPredicted RBP24.98■■□□□ 1.59
CLN5-201ENST00000377453 UNC5CLQ8IV45 518 aa24.98■■□□□ 1.59
CLN5-201ENST00000377453 USHBP1Q8N6Y0 703 aa24.98■■□□□ 1.59
CLN5-201ENST00000377453 NSFL1CQ9UNZ2 370 aaKnown RBP24.98■■□□□ 1.59
CLN5-201ENST00000377453 GNAI2P04899 355 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms