RNA–Protein interactions for RNA: ENST00000374358.4

TMEM50A-201, Transcript of transmembrane protein 50A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50A, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-201ENST00000374358 PLEKHG3A1L390 1219 aa19.41■□□□□ 0.7
TMEM50A-201ENST00000374358 NUTM2GQ5VZR2 741 aa19.41■□□□□ 0.7
TMEM50A-201ENST00000374358 DNAJC5Q9H3Z4 198 aa19.41■□□□□ 0.7
TMEM50A-201ENST00000374358 F6X3S4 739 aa19.4■□□□□ 0.7
TMEM50A-201ENST00000374358 HSP90AB1P08238 724 aaKnown RBP19.4■□□□□ 0.7
TMEM50A-201ENST00000374358 MTHFSDQ2M296 383 aaKnown RBP19.4■□□□□ 0.7
TMEM50A-201ENST00000374358 INTS3Q68E01 1043 aaKnown RBP19.4■□□□□ 0.7
TMEM50A-201ENST00000374358 AMOTL2Q9Y2J4 779 aa19.4■□□□□ 0.7
TMEM50A-201ENST00000374358 SLC4A2P04920 1241 aa19.4■□□□□ 0.7
TMEM50A-201ENST00000374358 G2E3Q7L622 706 aa19.4■□□□□ 0.7
TMEM50A-201ENST00000374358 DCTPP1Q9H773 170 aa19.39■□□□□ 0.7
TMEM50A-201ENST00000374358 RGPD8O14715 1765 aaPredicted RBP19.39■□□□□ 0.69
TMEM50A-201ENST00000374358 NCOA3Q9Y6Q9 1424 aa19.39■□□□□ 0.69
TMEM50A-201ENST00000374358 CEP85Q6P2H3 762 aa19.39■□□□□ 0.69
TMEM50A-201ENST00000374358 PLEKHG1Q9ULL1 1385 aa19.39■□□□□ 0.69
TMEM50A-201ENST00000374358 SLC4A10Q6U841 1118 aa19.38■□□□□ 0.69
TMEM50A-201ENST00000374358 RGPD1P0DJD0 1748 aa19.38■□□□□ 0.69
TMEM50A-201ENST00000374358 NALCNQ8IZF0 1738 aa19.38■□□□□ 0.69
TMEM50A-201ENST00000374358 CRB1P82279 1406 aa19.38■□□□□ 0.69
TMEM50A-201ENST00000374358 DDIT3P35638 169 aa19.38■□□□□ 0.69
TMEM50A-201ENST00000374358 PRKCSHP14314 528 aaPredicted RBP19.38■□□□□ 0.69
TMEM50A-201ENST00000374358 SNX21Q969T3 373 aa19.38■□□□□ 0.69
TMEM50A-201ENST00000374358 CDC45O75419 566 aa19.37■□□□□ 0.69
TMEM50A-201ENST00000374358 ANKRD44Q8N8A2 993 aa19.37■□□□□ 0.69
TMEM50A-201ENST00000374358 NGDNQ8NEJ9 315 aaKnown RBP19.37■□□□□ 0.69
TMEM50A-201ENST00000374358 RTL1A6NKG5 1358 aa19.37■□□□□ 0.69
TMEM50A-201ENST00000374358 TRAK2O60296 914 aa19.37■□□□□ 0.69
TMEM50A-201ENST00000374358 TSPYL4Q9UJ04 414 aa19.37■□□□□ 0.69
TMEM50A-201ENST00000374358 USP31Q70CQ4 1352 aa19.36■□□□□ 0.69
TMEM50A-201ENST00000374358 NECTIN2Q92692 538 aa19.36■□□□□ 0.69
TMEM50A-201ENST00000374358 CEP170BQ9Y4F5 1589 aaPredicted RBP19.36■□□□□ 0.69
TMEM50A-201ENST00000374358 SSH2Q76I76 1423 aa19.36■□□□□ 0.69
TMEM50A-201ENST00000374358 HSP90AA1P07900 732 aaKnown RBP19.35■□□□□ 0.69
TMEM50A-201ENST00000374358 TTC22Q5TAA0 569 aa19.35■□□□□ 0.69
TMEM50A-201ENST00000374358 TNPO1Q92973 898 aaKnown RBP19.35■□□□□ 0.69
TMEM50A-201ENST00000374358 EYA1Q99502 592 aa19.35■□□□□ 0.69
TMEM50A-201ENST00000374358 AMPHP49418 695 aa19.34■□□□□ 0.69
TMEM50A-201ENST00000374358 PANK2Q9BZ23 570 aa19.34■□□□□ 0.69
TMEM50A-201ENST00000374358 RTF1Q92541 710 aaKnown RBP19.34■□□□□ 0.69
TMEM50A-201ENST00000374358 ANO8Q9HCE9 1232 aaPredicted RBP19.34■□□□□ 0.69
TMEM50A-201ENST00000374358 KIAA0232Q92628 1395 aa19.34■□□□□ 0.69
TMEM50A-201ENST00000374358 EID1Q9Y6B2 187 aa19.33■□□□□ 0.69
TMEM50A-201ENST00000374358 FMN2Q9NZ56 1722 aa19.33■□□□□ 0.69
TMEM50A-201ENST00000374358 GAS2L2Q8NHY3 880 aa19.33■□□□□ 0.68
TMEM50A-201ENST00000374358 KIF24Q5T7B8 1368 aa19.32■□□□□ 0.68
TMEM50A-201ENST00000374358 FLT4P35916 1363 aa19.32■□□□□ 0.68
TMEM50A-201ENST00000374358 K7ELQ4 463 aaPredicted RBP19.32■□□□□ 0.68
TMEM50A-201ENST00000374358 TSHZ3Q63HK5 1081 aa19.32■□□□□ 0.68
TMEM50A-201ENST00000374358 LTV1Q96GA3 475 aaPredicted RBP19.32■□□□□ 0.68
TMEM50A-201ENST00000374358 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.32■□□□□ 0.68
TMEM50A-201ENST00000374358 ARHGEF10O15013 1369 aa19.31■□□□□ 0.68
TMEM50A-201ENST00000374358 AK9Q5TCS8 1911 aa19.31■□□□□ 0.68
TMEM50A-201ENST00000374358 XRCC6P12956 609 aaKnown RBP eCLIP19.31■□□□□ 0.68
TMEM50A-201ENST00000374358 SDSP20132 328 aa19.31■□□□□ 0.68
TMEM50A-201ENST00000374358 PTPRCP08575 1304 aa19.31■□□□□ 0.68
TMEM50A-201ENST00000374358 NLRP6P59044 892 aa19.31■□□□□ 0.68
TMEM50A-201ENST00000374358 SBNO1A3KN83 1393 aa19.3■□□□□ 0.68
TMEM50A-201ENST00000374358 RPAP2Q8IXW5 612 aaPredicted RBP19.3■□□□□ 0.68
TMEM50A-201ENST00000374358 DIP2AQ14689 1571 aa19.3■□□□□ 0.68
TMEM50A-201ENST00000374358 PIK3C2AO00443 1686 aa19.29■□□□□ 0.68
TMEM50A-201ENST00000374358 GOLGA6L3A6NEY3 463 aa19.29■□□□□ 0.68
TMEM50A-201ENST00000374358 RBM33Q96EV2 1170 aaKnown RBP19.29■□□□□ 0.68
TMEM50A-201ENST00000374358 USHBP1Q8N6Y0 703 aa19.28■□□□□ 0.68
TMEM50A-201ENST00000374358 HAP1P54257 671 aaPredicted RBP19.28■□□□□ 0.68
TMEM50A-201ENST00000374358 EXOC6BQ9Y2D4 811 aa19.28■□□□□ 0.68
TMEM50A-201ENST00000374358 IGSF1Q8N6C5 1336 aa19.28■□□□□ 0.68
TMEM50A-201ENST00000374358 TTC21AQ8NDW8 1320 aa19.28■□□□□ 0.68
TMEM50A-201ENST00000374358 FSD2A1L4K1 749 aa19.28■□□□□ 0.68
TMEM50A-201ENST00000374358 SSFA2P28290 1259 aa19.28■□□□□ 0.68
TMEM50A-201ENST00000374358 RAB3GAP1Q15042 981 aa19.28■□□□□ 0.68
TMEM50A-201ENST00000374358 KDRP35968 1356 aa19.27■□□□□ 0.68
TMEM50A-201ENST00000374358 L1TD1Q5T7N2 865 aaKnown RBP19.27■□□□□ 0.68
TMEM50A-201ENST00000374358 DDX11L8A8MPP1 907 aa19.27■□□□□ 0.67
TMEM50A-201ENST00000374358 KCNA6P17658 529 aa19.26■□□□□ 0.67
TMEM50A-201ENST00000374358 C14orf37Q86TY3 774 aa19.26■□□□□ 0.67
TMEM50A-201ENST00000374358 USP26Q9BXU7 913 aa19.26■□□□□ 0.67
TMEM50A-201ENST00000374358 FKBP5Q13451 457 aaPredicted RBP19.24■□□□□ 0.67
TMEM50A-201ENST00000374358 TBX22Q9Y458 520 aa19.24■□□□□ 0.67
TMEM50A-201ENST00000374358 HOXC9P31274 260 aa19.24■□□□□ 0.67
TMEM50A-201ENST00000374358 PLEKHG5O94827 1062 aa19.23■□□□□ 0.67
TMEM50A-201ENST00000374358 FLIIQ13045 1269 aa19.23■□□□□ 0.67
TMEM50A-201ENST00000374358 CIZ1Q9ULV3 898 aaPredicted RBP19.23■□□□□ 0.67
TMEM50A-201ENST00000374358 PNMA6EA0A0J9YXQ4 647 aa19.22■□□□□ 0.67
TMEM50A-201ENST00000374358 ABTB2Q8N961 1025 aa19.22■□□□□ 0.67
TMEM50A-201ENST00000374358 IL17REQ8NFR9 667 aa19.22■□□□□ 0.67
TMEM50A-201ENST00000374358 STK31Q9BXU1 1019 aa19.22■□□□□ 0.67
TMEM50A-201ENST00000374358 SETD1BQ9UPS6 1966 aaKnown RBP19.22■□□□□ 0.67
TMEM50A-201ENST00000374358 PKP1Q13835 747 aa19.22■□□□□ 0.67
TMEM50A-201ENST00000374358 RRAGDQ9NQL2 400 aaPredicted RBP19.22■□□□□ 0.67
TMEM50A-201ENST00000374358 GNAT3A8MTJ3 354 aa19.21■□□□□ 0.67
TMEM50A-201ENST00000374358 CCT4P50991 539 aaKnown RBP19.21■□□□□ 0.67
TMEM50A-201ENST00000374358 GBP4Q96PP9 640 aa19.21■□□□□ 0.67
TMEM50A-201ENST00000374358 ARHGAP23Q9P227 1491 aa19.21■□□□□ 0.67
TMEM50A-201ENST00000374358 SLIT1O75093 1534 aa19.21■□□□□ 0.67
TMEM50A-201ENST00000374358 PDE1AP54750 535 aa19.2■□□□□ 0.66
TMEM50A-201ENST00000374358 GAS2L3Q86XJ1 694 aa19.2■□□□□ 0.66
TMEM50A-201ENST00000374358 ZBTB7CA1YPR0 619 aa19.19■□□□□ 0.66
TMEM50A-201ENST00000374358 HMMRO75330 724 aa19.19■□□□□ 0.66
TMEM50A-201ENST00000374358 GNAI2P04899 355 aa19.19■□□□□ 0.66
TMEM50A-201ENST00000374358 RABEP1Q15276 862 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms