RNA–Protein interactions for RNA: ENST00000373020.8

TSPAN6-201, Transcript of tetraspanin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN6, Length 2,206 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-201ENST00000373020 EID1Q9Y6B2 187 aa15.7■□□□□ 0.1
TSPAN6-201ENST00000373020 PTPRCP08575 1304 aa15.7■□□□□ 0.1
TSPAN6-201ENST00000373020 SLC26A8Q96RN1 970 aa15.7■□□□□ 0.1
TSPAN6-201ENST00000373020 DCTPP1Q9H773 170 aa15.7■□□□□ 0.1
TSPAN6-201ENST00000373020 CHMP5Q9NZZ3 219 aa15.7■□□□□ 0.1
TSPAN6-201ENST00000373020 AMOTL2Q9Y2J4 779 aa15.7■□□□□ 0.1
TSPAN6-201ENST00000373020 ANKARQ7Z5J8 1434 aa15.69■□□□□ 0.1
TSPAN6-201ENST00000373020 DDIT3P35638 169 aa15.69■□□□□ 0.1
TSPAN6-201ENST00000373020 KRT24Q2M2I5 525 aa15.69■□□□□ 0.1
TSPAN6-201ENST00000373020 MCM10Q7L590 875 aa15.69■□□□□ 0.1
TSPAN6-201ENST00000373020 HSCBQ8IWL3 235 aa15.69■□□□□ 0.1
TSPAN6-201ENST00000373020 CEP170BQ9Y4F5 1589 aaPredicted RBP15.69■□□□□ 0.1
TSPAN6-201ENST00000373020 NUTM2FA1L443 756 aa15.68■□□□□ 0.1
TSPAN6-201ENST00000373020 ANKRD44Q8N8A2 993 aa15.68■□□□□ 0.1
TSPAN6-201ENST00000373020 IGSF1Q8N6C5 1336 aa15.68■□□□□ 0.1
TSPAN6-201ENST00000373020 MSH6P52701 1360 aa15.68■□□□□ 0.1
TSPAN6-201ENST00000373020 TBC1D9Q6ZT07 1266 aa15.68■□□□□ 0.1
TSPAN6-201ENST00000373020 KIF2CQ99661 725 aa15.68■□□□□ 0.1
TSPAN6-201ENST00000373020 RTL1A6NKG5 1358 aa15.67■□□□□ 0.1
TSPAN6-201ENST00000373020 CEBPAP49715 358 aaPredicted RBP15.67■□□□□ 0.1
TSPAN6-201ENST00000373020 NWD1Q149M9 1564 aa15.67■□□□□ 0.1
TSPAN6-201ENST00000373020 FAM208AQ9UK61 1670 aaKnown RBP15.66■□□□□ 0.1
TSPAN6-201ENST00000373020 BRPF3Q9ULD4 1205 aa15.66■□□□□ 0.1
TSPAN6-201ENST00000373020 GSPT1P15170 499 aaKnown RBP15.66■□□□□ 0.1
TSPAN6-201ENST00000373020 MCM4P33991 863 aa15.66■□□□□ 0.1
TSPAN6-201ENST00000373020 PLEKHM2Q8IWE5 1019 aa15.66■□□□□ 0.1
TSPAN6-201ENST00000373020 RPAP2Q8IXW5 612 aaPredicted RBP15.66■□□□□ 0.1
TSPAN6-201ENST00000373020 N4BP2Q86UW6 1770 aaPredicted RBP15.65■□□□□ 0.1
TSPAN6-201ENST00000373020 CDC45O75419 566 aa15.65■□□□□ 0.1
TSPAN6-201ENST00000373020 CEP85Q6P2H3 762 aa15.65■□□□□ 0.1
TSPAN6-201ENST00000373020 MTHFSDQ2M296 383 aaKnown RBP15.64■□□□□ 0.09
TSPAN6-201ENST00000373020 SPRYD3Q8NCJ5 442 aa15.63■□□□□ 0.09
TSPAN6-201ENST00000373020 TTC22Q5TAA0 569 aa15.63■□□□□ 0.09
TSPAN6-201ENST00000373020 FOXO3O43524 673 aa15.62■□□□□ 0.09
TSPAN6-201ENST00000373020 EIF5BO60841 1220 aaKnown RBP15.62■□□□□ 0.09
TSPAN6-201ENST00000373020 GAS2L2Q8NHY3 880 aa15.62■□□□□ 0.09
TSPAN6-201ENST00000373020 EYA1Q99502 592 aa15.62■□□□□ 0.09
TSPAN6-201ENST00000373020 CIZ1Q9ULV3 898 aaPredicted RBP15.62■□□□□ 0.09
TSPAN6-201ENST00000373020 HTATSF1O43719 755 aaKnown RBP15.62■□□□□ 0.09
TSPAN6-201ENST00000373020 NGDNQ8NEJ9 315 aaKnown RBP15.62■□□□□ 0.09
TSPAN6-201ENST00000373020 THEMISQ8N1K5 641 aaPredicted RBP15.61■□□□□ 0.09
TSPAN6-201ENST00000373020 MEIS3Q99687 375 aa15.61■□□□□ 0.09
TSPAN6-201ENST00000373020 SOX12O15370 315 aa15.6■□□□□ 0.09
TSPAN6-201ENST00000373020 CACNA1FO60840 1977 aa15.6■□□□□ 0.09
TSPAN6-201ENST00000373020 RTF1Q92541 710 aaKnown RBP15.6■□□□□ 0.09
TSPAN6-201ENST00000373020 TSPYL4Q9UJ04 414 aa15.6■□□□□ 0.09
TSPAN6-201ENST00000373020 SLC4A2P04920 1241 aa15.59■□□□□ 0.09
TSPAN6-201ENST00000373020 AMPHP49418 695 aa15.59■□□□□ 0.09
TSPAN6-201ENST00000373020 TUBGCP6Q96RT7 1819 aa15.58■□□□□ 0.08
TSPAN6-201ENST00000373020 CD2BP2O95400 341 aaKnown RBP15.58■□□□□ 0.08
TSPAN6-201ENST00000373020 HOXC9P31274 260 aa15.58■□□□□ 0.08
TSPAN6-201ENST00000373020 CCT4P50991 539 aaKnown RBP15.58■□□□□ 0.08
TSPAN6-201ENST00000373020 G2E3Q7L622 706 aa15.58■□□□□ 0.08
TSPAN6-201ENST00000373020 MIS18AQ9NYP9 233 aa15.58■□□□□ 0.08
TSPAN6-201ENST00000373020 SOS1Q07889 1333 aaPredicted RBP15.57■□□□□ 0.08
TSPAN6-201ENST00000373020 DDX11L8A8MPP1 907 aa15.57■□□□□ 0.08
TSPAN6-201ENST00000373020 K7ELQ4 463 aaPredicted RBP15.57■□□□□ 0.08
TSPAN6-201ENST00000373020 HSP90AB1P08238 724 aaKnown RBP15.57■□□□□ 0.08
TSPAN6-201ENST00000373020 PXDNLA1KZ92 1463 aa15.57■□□□□ 0.08
TSPAN6-201ENST00000373020 FSD2A1L4K1 749 aa15.56■□□□□ 0.08
TSPAN6-201ENST00000373020 L1TD1Q5T7N2 865 aaKnown RBP15.56■□□□□ 0.08
TSPAN6-201ENST00000373020 C16orf71Q8IYS4 520 aaPredicted RBP15.56■□□□□ 0.08
TSPAN6-201ENST00000373020 OTUD7AQ8TE49 926 aaPredicted RBP15.56■□□□□ 0.08
TSPAN6-201ENST00000373020 LTN1O94822 1766 aa15.56■□□□□ 0.08
TSPAN6-201ENST00000373020 MED1Q15648 1581 aaPredicted RBP15.56■□□□□ 0.08
TSPAN6-201ENST00000373020 KCNA6P17658 529 aa15.56■□□□□ 0.08
TSPAN6-201ENST00000373020 RAB3GAP1Q15042 981 aa15.56■□□□□ 0.08
TSPAN6-201ENST00000373020 CHD2O14647 1828 aaKnown RBP15.56■□□□□ 0.08
TSPAN6-201ENST00000373020 MAP3K5Q99683 1374 aa15.55■□□□□ 0.08
TSPAN6-201ENST00000373020 HMMRO75330 724 aa15.55■□□□□ 0.08
TSPAN6-201ENST00000373020 NLRP6P59044 892 aa15.55■□□□□ 0.08
TSPAN6-201ENST00000373020 BABAM1Q9NWV8 329 aa15.55■□□□□ 0.08
TSPAN6-201ENST00000373020 NFAT5O94916 1531 aa15.55■□□□□ 0.08
TSPAN6-201ENST00000373020 PHRF1Q9P1Y6 1649 aaKnown RBP15.54■□□□□ 0.08
TSPAN6-201ENST00000373020 GNAT3A8MTJ3 354 aa15.54■□□□□ 0.08
TSPAN6-201ENST00000373020 TRAK2O60296 914 aa15.54■□□□□ 0.08
TSPAN6-201ENST00000373020 OSBPL3Q9H4L5 887 aa15.54■□□□□ 0.08
TSPAN6-201ENST00000373020 SDSP20132 328 aa15.53■□□□□ 0.08
TSPAN6-201ENST00000373020 RABEP1Q15276 862 aa15.53■□□□□ 0.08
TSPAN6-201ENST00000373020 TNPO1Q92973 898 aaKnown RBP15.53■□□□□ 0.08
TSPAN6-201ENST00000373020 RBM42Q9BTD8 480 aaKnown RBP15.53■□□□□ 0.08
TSPAN6-201ENST00000373020 USP26Q9BXU7 913 aa15.53■□□□□ 0.08
TSPAN6-201ENST00000373020 ZNF142P52746 1687 aaPredicted RBP15.53■□□□□ 0.08
TSPAN6-201ENST00000373020 F6X3S4 739 aa15.53■□□□□ 0.08
TSPAN6-201ENST00000373020 SMARCA5O60264 1052 aaPredicted RBP15.52■□□□□ 0.08
TSPAN6-201ENST00000373020 STK31Q9BXU1 1019 aa15.52■□□□□ 0.08
TSPAN6-201ENST00000373020 SALL3Q9BXA9 1300 aa15.52■□□□□ 0.08
TSPAN6-201ENST00000373020 FLIIQ13045 1269 aa15.52■□□□□ 0.07
TSPAN6-201ENST00000373020 RTN4Q9NQC3 1192 aaKnown RBP15.52■□□□□ 0.07
TSPAN6-201ENST00000373020 CCDC30Q5VVM6 783 aa15.51■□□□□ 0.07
TSPAN6-201ENST00000373020 GNAI2P04899 355 aa15.51■□□□□ 0.07
TSPAN6-201ENST00000373020 IL17REQ8NFR9 667 aa15.51■□□□□ 0.07
TSPAN6-201ENST00000373020 KDM3BQ7LBC6 1761 aa15.51■□□□□ 0.07
TSPAN6-201ENST00000373020 SLC4A10Q6U841 1118 aa15.5■□□□□ 0.07
TSPAN6-201ENST00000373020 CLEC17AQ6ZS10 378 aa15.5■□□□□ 0.07
TSPAN6-201ENST00000373020 GBP4Q96PP9 640 aa15.5■□□□□ 0.07
TSPAN6-201ENST00000373020 CEMIPQ8WUJ3 1361 aa15.5■□□□□ 0.07
TSPAN6-201ENST00000373020 GOLGA6L3A6NEY3 463 aa15.49■□□□□ 0.07
TSPAN6-201ENST00000373020 CASC1Q6TDU7 716 aa15.49■□□□□ 0.07
TSPAN6-201ENST00000373020 ABTB2Q8N961 1025 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms