RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 KDRP35968 1356 aa12.65□□□□□ -0.38
PRPF38B-203ENST00000370025 A0A0U1RQG5 324 aaPredicted RBP12.65□□□□□ -0.39
PRPF38B-203ENST00000370025 KDM4FA0A1W2PPD8 638 aa12.65□□□□□ -0.39
PRPF38B-203ENST00000370025 XPCQ01831 940 aaPredicted RBP12.65□□□□□ -0.39
PRPF38B-203ENST00000370025 FTSJ3Q8IY81 847 aaKnown RBP12.64□□□□□ -0.39
PRPF38B-203ENST00000370025 IP6K1Q92551 441 aa12.64□□□□□ -0.39
PRPF38B-203ENST00000370025 LTV1Q96GA3 475 aaPredicted RBP12.64□□□□□ -0.39
PRPF38B-203ENST00000370025 MBIPQ9NS73 344 aa12.64□□□□□ -0.39
PRPF38B-203ENST00000370025 IPO8O15397 1037 aaKnown RBP12.64□□□□□ -0.39
PRPF38B-203ENST00000370025 DCTN1Q14203 1278 aa12.64□□□□□ -0.39
PRPF38B-203ENST00000370025 DCCP43146 1447 aa12.64□□□□□ -0.39
PRPF38B-203ENST00000370025 CADPS2Q86UW7 1296 aa12.64□□□□□ -0.39
PRPF38B-203ENST00000370025 DZIP1LQ8IYY4 767 aaKnown RBP12.64□□□□□ -0.39
PRPF38B-203ENST00000370025 GAS2L2Q8NHY3 880 aa12.64□□□□□ -0.39
PRPF38B-203ENST00000370025 KIF16BQ96L93 1317 aa12.63□□□□□ -0.39
PRPF38B-203ENST00000370025 HSP90AA1P07900 732 aaKnown RBP12.63□□□□□ -0.39
PRPF38B-203ENST00000370025 RTF1Q92541 710 aaKnown RBP12.63□□□□□ -0.39
PRPF38B-203ENST00000370025 CLUAP1Q96AJ1 413 aa12.63□□□□□ -0.39
PRPF38B-203ENST00000370025 LTN1O94822 1766 aa12.63□□□□□ -0.39
PRPF38B-203ENST00000370025 ZBTB7CA1YPR0 619 aa12.63□□□□□ -0.39
PRPF38B-203ENST00000370025 KDM2BQ8NHM5 1336 aa12.62□□□□□ -0.39
PRPF38B-203ENST00000370025 STRCP1A6NGW2 1772 aa12.62□□□□□ -0.39
PRPF38B-203ENST00000370025 GCP02774 474 aa12.62□□□□□ -0.39
PRPF38B-203ENST00000370025 RLBP1P12271 317 aa12.62□□□□□ -0.39
PRPF38B-203ENST00000370025 MTHFSDQ2M296 383 aaKnown RBP12.62□□□□□ -0.39
PRPF38B-203ENST00000370025 NFAT5O94916 1531 aa12.61□□□□□ -0.39
PRPF38B-203ENST00000370025 VAMP4O75379 141 aa12.61□□□□□ -0.39
PRPF38B-203ENST00000370025 ATF7IPQ6VMQ6 1270 aa12.61□□□□□ -0.39
PRPF38B-203ENST00000370025 ARID3AQ99856 593 aa12.61□□□□□ -0.39
PRPF38B-203ENST00000370025 NOB1Q9ULX3 412 aaKnown RBP12.61□□□□□ -0.39
PRPF38B-203ENST00000370025 MSH6P52701 1360 aa12.61□□□□□ -0.39
PRPF38B-203ENST00000370025 MST1RQ04912 1400 aa12.61□□□□□ -0.39
PRPF38B-203ENST00000370025 MCM10Q7L590 875 aa12.61□□□□□ -0.39
PRPF38B-203ENST00000370025 HAP1P54257 671 aaPredicted RBP12.61□□□□□ -0.39
PRPF38B-203ENST00000370025 TWISTNBQ3B726 338 aaPredicted RBP12.61□□□□□ -0.39
PRPF38B-203ENST00000370025 TNNQ9UQP3 1299 aa12.61□□□□□ -0.39
PRPF38B-203ENST00000370025 MVPQ14764 893 aaKnown RBP12.6□□□□□ -0.39
PRPF38B-203ENST00000370025 LMTK3Q96Q04 1460 aa12.6□□□□□ -0.39
PRPF38B-203ENST00000370025 BRPF1P55201 1214 aaPredicted RBP12.6□□□□□ -0.39
PRPF38B-203ENST00000370025 TRIM27P14373 513 aa12.6□□□□□ -0.39
PRPF38B-203ENST00000370025 ELL2O00472 640 aaPredicted RBP12.59□□□□□ -0.39
PRPF38B-203ENST00000370025 HTATSF1O43719 755 aaKnown RBP12.59□□□□□ -0.39
PRPF38B-203ENST00000370025 TRPM3Q9HCF6 1732 aaPredicted RBP12.59□□□□□ -0.39
PRPF38B-203ENST00000370025 CHL1O00533 1208 aa12.59□□□□□ -0.39
PRPF38B-203ENST00000370025 TSPYL6Q8N831 410 aa12.59□□□□□ -0.39
PRPF38B-203ENST00000370025 ARHGEF25Q86VW2 580 aa12.59□□□□□ -0.39
PRPF38B-203ENST00000370025 PANK2Q9BZ23 570 aa12.59□□□□□ -0.39
PRPF38B-203ENST00000370025 SLIT3O75094 1523 aa12.58□□□□□ -0.4
PRPF38B-203ENST00000370025 USP19O94966 1318 aa12.58□□□□□ -0.4
PRPF38B-203ENST00000370025 C8orf58Q8NAV2 365 aa12.58□□□□□ -0.4
PRPF38B-203ENST00000370025 DDX19BQ9UMR2 479 aa12.58□□□□□ -0.4
PRPF38B-203ENST00000370025 NPHP3Q7Z494 1330 aa12.58□□□□□ -0.4
PRPF38B-203ENST00000370025 GNAT3A8MTJ3 354 aa12.57□□□□□ -0.4
PRPF38B-203ENST00000370025 PHRF1Q9P1Y6 1649 aaKnown RBP12.57□□□□□ -0.4
PRPF38B-203ENST00000370025 ITPRIPQ8IWB1 547 aa12.57□□□□□ -0.4
PRPF38B-203ENST00000370025 MRPL50Q8N5N7 158 aaKnown RBP12.57□□□□□ -0.4
PRPF38B-203ENST00000370025 STRCQ7RTU9 1775 aa12.57□□□□□ -0.4
PRPF38B-203ENST00000370025 ARHGAP45Q92619 1136 aa12.57□□□□□ -0.4
PRPF38B-203ENST00000370025 USHBP1Q8N6Y0 703 aa12.56□□□□□ -0.4
PRPF38B-203ENST00000370025 CRB1P82279 1406 aa12.56□□□□□ -0.4
PRPF38B-203ENST00000370025 NBPF6Q5VWK0 638 aa12.56□□□□□ -0.4
PRPF38B-203ENST00000370025 NBPF4Q96M43 638 aa12.56□□□□□ -0.4
PRPF38B-203ENST00000370025 KIAA0232Q92628 1395 aa12.56□□□□□ -0.4
PRPF38B-203ENST00000370025 IGHDP01880 384 aa12.56□□□□□ -0.4
PRPF38B-203ENST00000370025 RWDD1Q9H446 243 aaPredicted RBP12.55□□□□□ -0.4
PRPF38B-203ENST00000370025 TSPYL4Q9UJ04 414 aa12.55□□□□□ -0.4
PRPF38B-203ENST00000370025 MAP3K5Q99683 1374 aa12.55□□□□□ -0.4
PRPF38B-203ENST00000370025 TMEM57Q8N5G2 664 aa12.55□□□□□ -0.4
PRPF38B-203ENST00000370025 CHMP4BQ9H444 224 aaKnown RBP12.55□□□□□ -0.4
PRPF38B-203ENST00000370025 DDX17Q92841 729 aaKnown RBP12.54□□□□□ -0.4
PRPF38B-203ENST00000370025 ALS2Q96Q42 1657 aa12.54□□□□□ -0.4
PRPF38B-203ENST00000370025 ANKRD24Q8TF21 1146 aa12.54□□□□□ -0.4
PRPF38B-203ENST00000370025 PCDHB15Q9Y5E8 787 aa12.54□□□□□ -0.4
PRPF38B-203ENST00000370025 API5Q9BZZ5 524 aaKnown RBP12.53□□□□□ -0.4
PRPF38B-203ENST00000370025 ZC3H6P61129 1189 aaKnown RBP12.53□□□□□ -0.4
PRPF38B-203ENST00000370025 FAM161AQ3B820 660 aa12.53□□□□□ -0.4
PRPF38B-203ENST00000370025 LRRC59Q96AG4 307 aaKnown RBP12.53□□□□□ -0.4
PRPF38B-203ENST00000370025 ZNF335Q9H4Z2 1342 aaPredicted RBP12.53□□□□□ -0.4
PRPF38B-203ENST00000370025 PLEKHO1Q53GL0 409 aaPredicted RBP12.52□□□□□ -0.4
PRPF38B-203ENST00000370025 MIS18AQ9NYP9 233 aa12.52□□□□□ -0.4
PRPF38B-203ENST00000370025 XIRP1Q702N8 1843 aaKnown RBP12.52□□□□□ -0.4
PRPF38B-203ENST00000370025 TNS3Q68CZ2 1445 aa12.52□□□□□ -0.41
PRPF38B-203ENST00000370025 BABAM1Q9NWV8 329 aa12.51□□□□□ -0.41
PRPF38B-203ENST00000370025 KRT24Q2M2I5 525 aa12.51□□□□□ -0.41
PRPF38B-203ENST00000370025 AMOTQ4VCS5 1084 aa12.51□□□□□ -0.41
PRPF38B-203ENST00000370025 TAF7Q15545 349 aaPredicted RBP12.51□□□□□ -0.41
PRPF38B-203ENST00000370025 IL17REQ8NFR9 667 aa12.51□□□□□ -0.41
PRPF38B-203ENST00000370025 RGPD2P0DJD1 1756 aa12.51□□□□□ -0.41
PRPF38B-203ENST00000370025 C8orf34Q49A92 452 aa12.5□□□□□ -0.41
PRPF38B-203ENST00000370025 BRINP3Q76B58 766 aa12.5□□□□□ -0.41
PRPF38B-203ENST00000370025 AXIN2Q9Y2T1 843 aa12.5□□□□□ -0.41
PRPF38B-203ENST00000370025 SPATA31A3Q5VYP0 1347 aa12.5□□□□□ -0.41
PRPF38B-203ENST00000370025 MED1Q15648 1581 aaPredicted RBP12.5□□□□□ -0.41
PRPF38B-203ENST00000370025 SLAIN2Q9P270 581 aa12.5□□□□□ -0.41
PRPF38B-203ENST00000370025 ZBTB40Q9NUA8 1239 aa12.5□□□□□ -0.41
PRPF38B-203ENST00000370025 XRCC6P12956 609 aaKnown RBP eCLIP12.49□□□□□ -0.411e-12■■□□□ 12.4
PRPF38B-203ENST00000370025 PXDNQ92626 1479 aa12.49□□□□□ -0.41
PRPF38B-203ENST00000370025 ZNF530Q6P9A1 599 aaPredicted RBP12.49□□□□□ -0.41
PRPF38B-203ENST00000370025 LRRC37A3O60309 1634 aa12.49□□□□□ -0.41
PRPF38B-203ENST00000370025 GOLGA6L3A6NEY3 463 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms