RNA–Protein interactions for RNA: ENST00000369091.6

PRDM1-202, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 2,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-202ENST00000369091 KCNJ4P48050 445 aa22.67■■□□□ 1.22
PRDM1-202ENST00000369091 IRX5P78411 483 aaPredicted RBP22.67■■□□□ 1.22
PRDM1-202ENST00000369091 DCTPP1Q9H773 170 aa22.67■■□□□ 1.22
PRDM1-202ENST00000369091 USP32Q8NFA0 1604 aa22.67■■□□□ 1.22
PRDM1-202ENST00000369091 KNDC1Q76NI1 1749 aa22.67■■□□□ 1.22
PRDM1-202ENST00000369091 REC8O95072 547 aa22.67■■□□□ 1.22
PRDM1-202ENST00000369091 CFAP44Q96MT7 982 aa22.67■■□□□ 1.22
PRDM1-202ENST00000369091 CTNNA3Q9UI47 895 aa22.67■■□□□ 1.22
PRDM1-202ENST00000369091 SLFN14P0C7P3 912 aa22.66■■□□□ 1.22
PRDM1-202ENST00000369091 CDK11BP21127 795 aaKnown RBP22.66■■□□□ 1.22
PRDM1-202ENST00000369091 CCDC183Q5T5S1 534 aa22.66■■□□□ 1.22
PRDM1-202ENST00000369091 GGNBP2Q9H3C7 697 aa22.66■■□□□ 1.22
PRDM1-202ENST00000369091 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.66■■□□□ 1.22
PRDM1-202ENST00000369091 PDIA4P13667 645 aaKnown RBP22.66■■□□□ 1.22
PRDM1-202ENST00000369091 TMEM132EQ6IEE7 984 aa22.65■■□□□ 1.22
PRDM1-202ENST00000369091 ERC2O15083 957 aa22.65■■□□□ 1.22
PRDM1-202ENST00000369091 BRPF1P55201 1214 aaPredicted RBP22.65■■□□□ 1.22
PRDM1-202ENST00000369091 MYOM2P54296 1465 aa22.65■■□□□ 1.22
PRDM1-202ENST00000369091 SPAG9O60271 1321 aaKnown RBP22.64■■□□□ 1.21
PRDM1-202ENST00000369091 CUL4AQ13619 759 aa22.64■■□□□ 1.21
PRDM1-202ENST00000369091 PALD1Q9ULE6 856 aa22.64■■□□□ 1.21
PRDM1-202ENST00000369091 COL3A1P02461 1466 aaPredicted RBP22.64■■□□□ 1.21
PRDM1-202ENST00000369091 GABPB1Q06547 395 aaPredicted RBP22.63■■□□□ 1.21
PRDM1-202ENST00000369091 CNPY2Q9Y2B0 182 aa22.63■■□□□ 1.21
PRDM1-202ENST00000369091 INO80Q9ULG1 1556 aaPredicted RBP22.63■■□□□ 1.21
PRDM1-202ENST00000369091 ARHGAP45Q92619 1136 aa22.63■■□□□ 1.21
PRDM1-202ENST00000369091 QRICH2Q9H0J4 1663 aa22.63■■□□□ 1.21
PRDM1-202ENST00000369091 GIMAP6Q6P9H5 292 aa22.62■■□□□ 1.21
PRDM1-202ENST00000369091 MX1P20591 662 aa22.61■■□□□ 1.21
PRDM1-202ENST00000369091 DDX41Q9UJV9 622 aaKnown RBP22.61■■□□□ 1.21
PRDM1-202ENST00000369091 C16orf45Q96MC5 204 aaPredicted RBP22.6■■□□□ 1.21
PRDM1-202ENST00000369091 SRCIN1Q9C0H9 1055 aa22.6■■□□□ 1.21
PRDM1-202ENST00000369091 PTGS1P23219 599 aa22.6■■□□□ 1.21
PRDM1-202ENST00000369091 CABP2Q9NPB3 220 aa22.59■■□□□ 1.21
PRDM1-202ENST00000369091 ZC3H13Q5T200 1668 aaKnown RBP22.59■■□□□ 1.21
PRDM1-202ENST00000369091 NSD2O96028 1365 aa22.58■■□□□ 1.21
PRDM1-202ENST00000369091 UPF3BQ9BZI7 483 aaKnown RBP22.58■■□□□ 1.21
PRDM1-202ENST00000369091 TSHZ3Q63HK5 1081 aa22.58■■□□□ 1.2
PRDM1-202ENST00000369091 TCHHQ07283 1943 aa22.57■■□□□ 1.2
PRDM1-202ENST00000369091 ERCC6L2Q5T890 1561 aa22.57■■□□□ 1.2
PRDM1-202ENST00000369091 ERICH4A6NGS2 130 aa22.57■■□□□ 1.2
PRDM1-202ENST00000369091 CHGAP10645 457 aaKnown RBP22.57■■□□□ 1.2
PRDM1-202ENST00000369091 ZNF428Q96B54 188 aa22.57■■□□□ 1.2
PRDM1-202ENST00000369091 PRKAR2BP31323 418 aa22.56■■□□□ 1.2
PRDM1-202ENST00000369091 TERF2Q15554 542 aa22.56■■□□□ 1.2
PRDM1-202ENST00000369091 FUCA2Q9BTY2 467 aa22.56■■□□□ 1.2
PRDM1-202ENST00000369091 DIAPH1O60610 1272 aaKnown RBP22.56■■□□□ 1.2
PRDM1-202ENST00000369091 INTS4Q96HW7 963 aaKnown RBP22.56■■□□□ 1.2
PRDM1-202ENST00000369091 MCM2P49736 904 aa22.55■■□□□ 1.2
PRDM1-202ENST00000369091 LRMPQ12912 555 aa22.55■■□□□ 1.2
PRDM1-202ENST00000369091 KIF18AQ8NI77 898 aa22.55■■□□□ 1.2
PRDM1-202ENST00000369091 WDR33Q9C0J8 1336 aaKnown RBP22.55■■□□□ 1.2
PRDM1-202ENST00000369091 FIBPO43427 364 aa22.55■■□□□ 1.2
PRDM1-202ENST00000369091 ANKRD44Q8N8A2 993 aa22.55■■□□□ 1.2
PRDM1-202ENST00000369091 MBIPQ9NS73 344 aa22.55■■□□□ 1.2
PRDM1-202ENST00000369091 ATP10DQ9P241 1426 aa22.55■■□□□ 1.2
PRDM1-202ENST00000369091 MROH2AA6NES4 1674 aa22.55■■□□□ 1.2
PRDM1-202ENST00000369091 KRT24Q2M2I5 525 aa22.54■■□□□ 1.2
PRDM1-202ENST00000369091 RPAP1Q9BWH6 1393 aaPredicted RBP22.54■■□□□ 1.2
PRDM1-202ENST00000369091 MORC2Q9Y6X9 1032 aaPredicted RBP22.54■■□□□ 1.2
PRDM1-202ENST00000369091 SAFB2Q14151 953 aaKnown RBP eCLIP22.54■■□□□ 1.2
PRDM1-202ENST00000369091 TWISTNBQ3B726 338 aaPredicted RBP22.54■■□□□ 1.2
PRDM1-202ENST00000369091 C8orf58Q8NAV2 365 aa22.54■■□□□ 1.2
PRDM1-202ENST00000369091 TET3O43151 1660 aa22.53■■□□□ 1.2
PRDM1-202ENST00000369091 CEP85Q6P2H3 762 aa22.53■■□□□ 1.2
PRDM1-202ENST00000369091 TMEM87AQ8NBN3 555 aa22.53■■□□□ 1.2
PRDM1-202ENST00000369091 SMTNL1A8MU46 457 aa22.53■■□□□ 1.2
PRDM1-202ENST00000369091 DTNBO60941 627 aa22.53■■□□□ 1.2
PRDM1-202ENST00000369091 API5Q9BZZ5 524 aaKnown RBP22.53■■□□□ 1.2
PRDM1-202ENST00000369091 CYB5RLQ6IPT4 315 aa22.52■■□□□ 1.2
PRDM1-202ENST00000369091 PHACTR3Q96KR7 559 aa22.52■■□□□ 1.2
PRDM1-202ENST00000369091 ST7Q9NRC1 585 aa22.52■■□□□ 1.2
PRDM1-202ENST00000369091 IFT57Q9NWB7 429 aa22.52■■□□□ 1.2
PRDM1-202ENST00000369091 AFAP1Q8N556 730 aa22.52■■□□□ 1.2
PRDM1-202ENST00000369091 LRRC7Q96NW7 1537 aa22.52■■□□□ 1.2
PRDM1-202ENST00000369091 A0A1W2PP64 1363 aa22.52■■□□□ 1.19
PRDM1-202ENST00000369091 TPM3P06753 285 aa22.51■■□□□ 1.19
PRDM1-202ENST00000369091 NRXN1Q9ULB1 1477 aa22.51■■□□□ 1.19
PRDM1-202ENST00000369091 CCDC66A2RUB6 948 aa22.51■■□□□ 1.19
PRDM1-202ENST00000369091 GOLGA6L6A8MZA4 724 aa22.51■■□□□ 1.19
PRDM1-202ENST00000369091 TNNT1P13805 278 aa22.51■■□□□ 1.19
PRDM1-202ENST00000369091 UBE2HP62256 183 aa22.51■■□□□ 1.19
PRDM1-202ENST00000369091 TIGD1Q96MW7 591 aa22.51■■□□□ 1.19
PRDM1-202ENST00000369091 ANO2Q9NQ90 1003 aa22.51■■□□□ 1.19
PRDM1-202ENST00000369091 RTL1A6NKG5 1358 aa22.51■■□□□ 1.19
PRDM1-202ENST00000369091 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.5■■□□□ 1.19
PRDM1-202ENST00000369091 V9GYY5 206 aaPredicted RBP22.5■■□□□ 1.19
PRDM1-202ENST00000369091 IFT172Q9UG01 1749 aa22.5■■□□□ 1.19
PRDM1-202ENST00000369091 ARHGEF40Q8TER5 1519 aa22.5■■□□□ 1.19
PRDM1-202ENST00000369091 HMOX1P09601 288 aa22.5■■□□□ 1.19
PRDM1-202ENST00000369091 SYCP1Q15431 976 aa22.5■■□□□ 1.19
PRDM1-202ENST00000369091 TRERF1Q96PN7 1200 aa22.5■■□□□ 1.19
PRDM1-202ENST00000369091 TULP4Q9NRJ4 1543 aa22.5■■□□□ 1.19
PRDM1-202ENST00000369091 FBLN1P23142 703 aa22.49■■□□□ 1.19
PRDM1-202ENST00000369091 CCDC186Q7Z3E2 898 aa22.49■■□□□ 1.19
PRDM1-202ENST00000369091 ESYT1Q9BSJ8 1104 aa22.49■■□□□ 1.19
PRDM1-202ENST00000369091 NRBP1Q9UHY1 535 aa22.49■■□□□ 1.19
PRDM1-202ENST00000369091 PLCH2O75038 1416 aa22.49■■□□□ 1.19
PRDM1-202ENST00000369091 CAPN2P17655 700 aa22.49■■□□□ 1.19
PRDM1-202ENST00000369091 KRT222Q8N1A0 295 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms