RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 CABP1Q9NZU7 370 aa8.78□□□□□ -1
VTA1-202ENST00000367630 TSPY26PQ9H489 355 aa8.78□□□□□ -1
VTA1-202ENST00000367630 SMC3Q9UQE7 1217 aa8.78□□□□□ -1
VTA1-202ENST00000367630 PDCL2Q8N4E4 241 aa8.78□□□□□ -1
VTA1-202ENST00000367630 CLASRPQ8N2M8 674 aaKnown RBP8.78□□□□□ -1
VTA1-202ENST00000367630 GRPEL1Q9HAV7 217 aa8.78□□□□□ -1
VTA1-202ENST00000367630 PLEKHG2Q9H7P9 1386 aa8.77□□□□□ -1
VTA1-202ENST00000367630 HMGB1P09429 215 aaKnown RBP8.77□□□□□ -1
VTA1-202ENST00000367630 AEBP2Q6ZN18 517 aaPredicted RBP8.77□□□□□ -1
VTA1-202ENST00000367630 KLHL40Q2TBA0 621 aa8.77□□□□□ -1.01
VTA1-202ENST00000367630 PTCH1Q13635 1447 aa8.77□□□□□ -1.01
VTA1-202ENST00000367630 GNAT3A8MTJ3 354 aa8.77□□□□□ -1.01
VTA1-202ENST00000367630 NEMFO60524 1076 aa8.77□□□□□ -1.01
VTA1-202ENST00000367630 ZNF396Q96N95 335 aaPredicted RBP8.77□□□□□ -1.01
VTA1-202ENST00000367630 SBNO1A3KN83 1393 aa8.77□□□□□ -1.01
VTA1-202ENST00000367630 SSH1Q8WYL5 1049 aa8.77□□□□□ -1.01
VTA1-202ENST00000367630 RRP9O43818 475 aaKnown RBP8.77□□□□□ -1.01
VTA1-202ENST00000367630 KIF1BPQ96EK5 621 aa8.77□□□□□ -1.01
VTA1-202ENST00000367630 HMG20BQ9P0W2 317 aa8.77□□□□□ -1.01
VTA1-202ENST00000367630 IQSEC2Q5JU85 1478 aa8.77□□□□□ -1.01
VTA1-202ENST00000367630 TRIM27P14373 513 aa8.76□□□□□ -1.01
VTA1-202ENST00000367630 TMEM57Q8N5G2 664 aa8.76□□□□□ -1.01
VTA1-202ENST00000367630 MRPL50Q8N5N7 158 aaKnown RBP8.76□□□□□ -1.01
VTA1-202ENST00000367630 ANKRD44Q8N8A2 993 aa8.76□□□□□ -1.01
VTA1-202ENST00000367630 ANKRD26Q9UPS8 1709 aa8.76□□□□□ -1.01
VTA1-202ENST00000367630 FKBP5Q13451 457 aaPredicted RBP8.76□□□□□ -1.01
VTA1-202ENST00000367630 IDI1Q13907 227 aa8.76□□□□□ -1.01
VTA1-202ENST00000367630 TMEM132EQ6IEE7 984 aa8.76□□□□□ -1.01
VTA1-202ENST00000367630 IFT172Q9UG01 1749 aa8.76□□□□□ -1.01
VTA1-202ENST00000367630 TTC22Q5TAA0 569 aa8.76□□□□□ -1.01
VTA1-202ENST00000367630 ZSCAN25Q6NSZ9 544 aa8.76□□□□□ -1.01
VTA1-202ENST00000367630 TTC41PQ6P2S7 1318 aa8.76□□□□□ -1.01
VTA1-202ENST00000367630 PLEKHG1Q9ULL1 1385 aa8.76□□□□□ -1.01
VTA1-202ENST00000367630 CTAGE5O15320 804 aa8.76□□□□□ -1.01
VTA1-202ENST00000367630 GLRX3O76003 335 aaKnown RBP8.76□□□□□ -1.01
VTA1-202ENST00000367630 LNPKQ9C0E8 428 aa8.76□□□□□ -1.01
VTA1-202ENST00000367630 ALDH1L1O75891 902 aa8.75□□□□□ -1.01
VTA1-202ENST00000367630 PIP4K2AP48426 406 aaPredicted RBP8.75□□□□□ -1.01
VTA1-202ENST00000367630 TTC5Q8N0Z6 440 aa8.75□□□□□ -1.01
VTA1-202ENST00000367630 C9orf78Q9NZ63 289 aaPredicted RBP8.75□□□□□ -1.01
VTA1-202ENST00000367630 ZBTB40Q9NUA8 1239 aa8.75□□□□□ -1.01
VTA1-202ENST00000367630 CDC42BPGQ6DT37 1551 aa8.75□□□□□ -1.01
VTA1-202ENST00000367630 ATL3Q6DD88 541 aa8.75□□□□□ -1.01
VTA1-202ENST00000367630 SPG7Q9UQ90 795 aa8.75□□□□□ -1.01
VTA1-202ENST00000367630 DIP2CQ9Y2E4 1556 aa8.74□□□□□ -1.01
VTA1-202ENST00000367630 PHF23Q9BUL5 403 aaPredicted RBP8.74□□□□□ -1.01
VTA1-202ENST00000367630 GOLGA6L19H0YKK7 550 aa8.74□□□□□ -1.01
VTA1-202ENST00000367630 PAK3O75914 559 aaPredicted RBP8.74□□□□□ -1.01
VTA1-202ENST00000367630 CLTCQ00610 1675 aaKnown RBP8.74□□□□□ -1.01
VTA1-202ENST00000367630 KIDINS220Q9ULH0 1771 aa8.74□□□□□ -1.01
VTA1-202ENST00000367630 HSP90AA2PQ14568 343 aaPredicted RBP8.74□□□□□ -1.01
VTA1-202ENST00000367630 DCTPP1Q9H773 170 aa8.74□□□□□ -1.01
VTA1-202ENST00000367630 NCAPD2Q15021 1401 aa8.74□□□□□ -1.01
VTA1-202ENST00000367630 ZSCAN30Q86W11 494 aa8.74□□□□□ -1.01
VTA1-202ENST00000367630 KIF20BQ96Q89 1820 aa8.74□□□□□ -1.01
VTA1-202ENST00000367630 FYB1O15117 783 aa8.74□□□□□ -1.01
VTA1-202ENST00000367630 SLC4A10Q6U841 1118 aa8.74□□□□□ -1.01
VTA1-202ENST00000367630 DRC7Q8IY82 874 aa8.74□□□□□ -1.01
VTA1-202ENST00000367630 LRRC7Q96NW7 1537 aa8.73□□□□□ -1.01
VTA1-202ENST00000367630 TAF7Q15545 349 aaPredicted RBP8.73□□□□□ -1.01
VTA1-202ENST00000367630 HYPKQ9NX55 129 aa8.73□□□□□ -1.01
VTA1-202ENST00000367630 CYP46A1Q9Y6A2 500 aa8.73□□□□□ -1.01
VTA1-202ENST00000367630 ADGRB2O60241 1585 aa8.73□□□□□ -1.01
VTA1-202ENST00000367630 ABCC4O15439 1325 aa8.73□□□□□ -1.01
VTA1-202ENST00000367630 A0A0U1RQG5 324 aaPredicted RBP8.73□□□□□ -1.01
VTA1-202ENST00000367630 CTNNA3Q9UI47 895 aa8.73□□□□□ -1.01
VTA1-202ENST00000367630 H3BQV1 296 aa8.73□□□□□ -1.01
VTA1-202ENST00000367630 IFFO2Q5TF58 517 aa8.73□□□□□ -1.01
VTA1-202ENST00000367630 TBC1D2Q9BYX2 928 aa8.73□□□□□ -1.01
VTA1-202ENST00000367630 JMYQ8N9B5 988 aa8.73□□□□□ -1.01
VTA1-202ENST00000367630 TBX22Q9Y458 520 aa8.73□□□□□ -1.01
VTA1-202ENST00000367630 PXDNLA1KZ92 1463 aa8.73□□□□□ -1.01
VTA1-202ENST00000367630 PLEKHG3A1L390 1219 aa8.73□□□□□ -1.01
VTA1-202ENST00000367630 TXNDC2Q86VQ3 553 aa8.73□□□□□ -1.01
VTA1-202ENST00000367630 CFAP45Q9UL16 551 aa8.73□□□□□ -1.01
VTA1-202ENST00000367630 GOLGA6L1Q8N7Z2 621 aa8.72□□□□□ -1.01
VTA1-202ENST00000367630 DACH1Q9UI36 760 aa8.72□□□□□ -1.01
VTA1-202ENST00000367630 PNPLA6Q8IY17 1366 aa8.72□□□□□ -1.01
VTA1-202ENST00000367630 CCDC192P0DO97 292 aa8.72□□□□□ -1.01
VTA1-202ENST00000367630 GPS2Q13227 327 aa8.72□□□□□ -1.01
VTA1-202ENST00000367630 RAB3GAP1Q15042 981 aa8.72□□□□□ -1.01
VTA1-202ENST00000367630 ANO2Q9NQ90 1003 aa8.72□□□□□ -1.01
VTA1-202ENST00000367630 MX1P20591 662 aa8.72□□□□□ -1.01
VTA1-202ENST00000367630 BCL2L13Q9BXK5 485 aa8.72□□□□□ -1.01
VTA1-202ENST00000367630 GNL2Q13823 731 aaKnown RBP8.72□□□□□ -1.01
VTA1-202ENST00000367630 TMED8Q6PL24 325 aaPredicted RBP8.72□□□□□ -1.01
VTA1-202ENST00000367630 CDKL5O76039 1030 aa8.72□□□□□ -1.01
VTA1-202ENST00000367630 TPM1P09493 284 aa8.72□□□□□ -1.01
VTA1-202ENST00000367630 FRAT2O75474 233 aaPredicted RBP8.72□□□□□ -1.01
VTA1-202ENST00000367630 CCDC73Q6ZRK6 1079 aa8.72□□□□□ -1.01
VTA1-202ENST00000367630 ANKLE2Q86XL3 938 aa8.72□□□□□ -1.01
VTA1-202ENST00000367630 CARD14Q9BXL6 1004 aa8.72□□□□□ -1.01
VTA1-202ENST00000367630 SCAND2PQ9GZW5 306 aaPredicted RBP8.72□□□□□ -1.01
VTA1-202ENST00000367630 PIK3C2BO00750 1634 aa8.71□□□□□ -1.01
VTA1-202ENST00000367630 CLCN1P35523 988 aa8.71□□□□□ -1.01
VTA1-202ENST00000367630 SASS6Q6UVJ0 657 aa8.71□□□□□ -1.01
VTA1-202ENST00000367630 CDK11BP21127 795 aaKnown RBP8.71□□□□□ -1.01
VTA1-202ENST00000367630 CCDC183Q5T5S1 534 aa8.71□□□□□ -1.01
VTA1-202ENST00000367630 TAF3Q5VWG9 929 aa8.71□□□□□ -1.01
VTA1-202ENST00000367630 SYNE3Q6ZMZ3 975 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms