RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 GJD3Q8N144 294 aa2.94□□□□□ -1.94
SMARCAD1-202ENST00000359052 MAFGO15525 162 aa2.94□□□□□ -1.94
SMARCAD1-202ENST00000359052 MYT1Q01538 1121 aa2.94□□□□□ -1.94
SMARCAD1-202ENST00000359052 PDE4CQ08493 712 aa2.94□□□□□ -1.94
SMARCAD1-202ENST00000359052 SLC10A5Q5PT55 438 aa2.94□□□□□ -1.94
SMARCAD1-202ENST00000359052 ILDR2Q71H61 639 aa2.94□□□□□ -1.94
SMARCAD1-202ENST00000359052 LRRC4BQ9NT99 713 aa2.94□□□□□ -1.94
SMARCAD1-202ENST00000359052 CXXC1Q9P0U4 656 aaPredicted RBP2.94□□□□□ -1.94
SMARCAD1-202ENST00000359052 NDUFB9Q9Y6M9 179 aa2.94□□□□□ -1.94
SMARCAD1-202ENST00000359052 SLC4A3P48751 1232 aa2.94□□□□□ -1.94
SMARCAD1-202ENST00000359052 PLPP6Q8IY26 295 aa2.94□□□□□ -1.94
SMARCAD1-202ENST00000359052 TMEM134Q9H6X4 195 aa2.94□□□□□ -1.94
SMARCAD1-202ENST00000359052 PCDH10Q9P2E7 1040 aa2.94□□□□□ -1.94
SMARCAD1-202ENST00000359052 KLHL42Q9P2K6 505 aa2.94□□□□□ -1.94
SMARCAD1-202ENST00000359052 MARCH6O60337 910 aa2.93□□□□□ -1.94
SMARCAD1-202ENST00000359052 SLC10A3P09131 477 aa2.93□□□□□ -1.94
SMARCAD1-202ENST00000359052 NUP160Q12769 1436 aa2.93□□□□□ -1.94
SMARCAD1-202ENST00000359052 IGF2-ASQ6U949 168 aa2.93□□□□□ -1.94
SMARCAD1-202ENST00000359052 NRBP1Q9UHY1 535 aa2.93□□□□□ -1.94
SMARCAD1-202ENST00000359052 TOPBP1Q92547 1522 aa2.93□□□□□ -1.94
SMARCAD1-202ENST00000359052 GYS2P54840 703 aa2.93□□□□□ -1.94
SMARCAD1-202ENST00000359052 CCDC144BQ3MJ40 725 aa2.93□□□□□ -1.94
SMARCAD1-202ENST00000359052 JPH4Q96JJ6 628 aa2.93□□□□□ -1.94
SMARCAD1-202ENST00000359052 TMEM131LA2VDJ0 1609 aa2.93□□□□□ -1.94
SMARCAD1-202ENST00000359052 ABCA8O94911 1581 aa2.93□□□□□ -1.94
SMARCAD1-202ENST00000359052 NFE2Q16621 373 aaPredicted RBP2.93□□□□□ -1.94
SMARCAD1-202ENST00000359052 TTF2Q9UNY4 1162 aaKnown RBP2.93□□□□□ -1.94
SMARCAD1-202ENST00000359052 HSD3B2P26439 372 aa2.93□□□□□ -1.94
SMARCAD1-202ENST00000359052 SIM2Q14190 667 aaPredicted RBP2.93□□□□□ -1.94
SMARCAD1-202ENST00000359052 DCAF8Q5TAQ9 597 aa2.93□□□□□ -1.94
SMARCAD1-202ENST00000359052 CABP2Q9NPB3 220 aa2.93□□□□□ -1.94
SMARCAD1-202ENST00000359052 TMEM238LA0A1B0GVL6 79 aa2.92□□□□□ -1.94
SMARCAD1-202ENST00000359052 K7ESF4 209 aa2.92□□□□□ -1.94
SMARCAD1-202ENST00000359052 GRNP28799 593 aaKnown RBP2.92□□□□□ -1.94
SMARCAD1-202ENST00000359052 TMEM260Q9NX78 707 aa2.92□□□□□ -1.94
SMARCAD1-202ENST00000359052 GJD2Q9UKL4 321 aa2.92□□□□□ -1.94
SMARCAD1-202ENST00000359052 PCF11O94913 1555 aaKnown RBP2.92□□□□□ -1.94
SMARCAD1-202ENST00000359052 XIRP1Q702N8 1843 aaKnown RBP2.92□□□□□ -1.94
SMARCAD1-202ENST00000359052 MAPKBP1O60336 1514 aa2.92□□□□□ -1.94
SMARCAD1-202ENST00000359052 GABBR2O75899 941 aa2.92□□□□□ -1.94
SMARCAD1-202ENST00000359052 SERPINB4P48594 390 aa2.92□□□□□ -1.94
SMARCAD1-202ENST00000359052 CLCN6P51797 869 aa2.92□□□□□ -1.94
SMARCAD1-202ENST00000359052 PER1O15534 1290 aaPredicted RBP2.92□□□□□ -1.94
SMARCAD1-202ENST00000359052 EVI5O60447 810 aa2.92□□□□□ -1.94
SMARCAD1-202ENST00000359052 MAP4K4O95819 1239 aaPredicted RBP2.92□□□□□ -1.94
SMARCAD1-202ENST00000359052 HIRAP54198 1017 aaPredicted RBP2.92□□□□□ -1.94
SMARCAD1-202ENST00000359052 C8orf48Q96LL4 319 aa2.92□□□□□ -1.94
SMARCAD1-202ENST00000359052 DNMT3AQ9Y6K1 912 aaPredicted RBP2.92□□□□□ -1.94
SMARCAD1-202ENST00000359052 TIE1P35590 1138 aa2.92□□□□□ -1.94
SMARCAD1-202ENST00000359052 MICAL1Q8TDZ2 1067 aa2.92□□□□□ -1.94
SMARCAD1-202ENST00000359052 PLXNC1O60486 1568 aa2.91□□□□□ -1.94
SMARCAD1-202ENST00000359052 GPR182O15218 404 aa2.91□□□□□ -1.94
SMARCAD1-202ENST00000359052 GCGRP47871 477 aa2.91□□□□□ -1.94
SMARCAD1-202ENST00000359052 STAG2Q8N3U4 1231 aa2.91□□□□□ -1.94
SMARCAD1-202ENST00000359052 GLIS3Q8NEA6 775 aa2.91□□□□□ -1.94
SMARCAD1-202ENST00000359052 CASS4Q9NQ75 786 aa2.91□□□□□ -1.94
SMARCAD1-202ENST00000359052 KCNG1Q9UIX4 513 aa2.91□□□□□ -1.94
SMARCAD1-202ENST00000359052 UGGT2Q9NYU1 1516 aa2.91□□□□□ -1.94
SMARCAD1-202ENST00000359052 ADGBQ8N7X0 1667 aa2.91□□□□□ -1.94
SMARCAD1-202ENST00000359052 CEP152O94986 1710 aa2.91□□□□□ -1.94
SMARCAD1-202ENST00000359052 CDC42BPBQ9Y5S2 1711 aa2.91□□□□□ -1.94
SMARCAD1-202ENST00000359052 ZNF142P52746 1687 aaPredicted RBP2.91□□□□□ -1.94
SMARCAD1-202ENST00000359052 LHX8Q68G74 356 aa2.91□□□□□ -1.94
SMARCAD1-202ENST00000359052 SH3BP5LQ7L8J4 393 aa2.91□□□□□ -1.94
SMARCAD1-202ENST00000359052 TMC7Q7Z402 723 aa2.91□□□□□ -1.94
SMARCAD1-202ENST00000359052 APBA2Q99767 749 aa2.91□□□□□ -1.94
SMARCAD1-202ENST00000359052 SENP7Q9BQF6 1050 aa2.91□□□□□ -1.94
SMARCAD1-202ENST00000359052 CDC42BPAQ5VT25 1732 aa2.91□□□□□ -1.94
SMARCAD1-202ENST00000359052 TGFB3P10600 412 aa2.91□□□□□ -1.94
SMARCAD1-202ENST00000359052 SELPP16109 830 aa2.91□□□□□ -1.94
SMARCAD1-202ENST00000359052 SOX11P35716 441 aa2.91□□□□□ -1.94
SMARCAD1-202ENST00000359052 EMILIN1Q9Y6C2 1016 aa2.91□□□□□ -1.94
SMARCAD1-202ENST00000359052 CRYBG1Q9Y4K1 1723 aa2.91□□□□□ -1.94
SMARCAD1-202ENST00000359052 MROH1Q8NDA8 1641 aa2.91□□□□□ -1.94
SMARCAD1-202ENST00000359052 PADI6Q6TGC4 694 aa2.91□□□□□ -1.94
SMARCAD1-202ENST00000359052 PCGF5Q86SE9 256 aa2.91□□□□□ -1.94
SMARCAD1-202ENST00000359052 SETDB2Q96T68 719 aa2.91□□□□□ -1.94
SMARCAD1-202ENST00000359052 PCDH12Q9NPG4 1184 aa2.91□□□□□ -1.94
SMARCAD1-202ENST00000359052 USP54Q70EL1 1684 aa2.9□□□□□ -1.94
SMARCAD1-202ENST00000359052 GIGYF1O75420 1035 aaPredicted RBP2.9□□□□□ -1.94
SMARCAD1-202ENST00000359052 WASHC4Q2M389 1173 aa2.9□□□□□ -1.94
SMARCAD1-202ENST00000359052 CTC1Q2NKJ3 1217 aa2.9□□□□□ -1.94
SMARCAD1-202ENST00000359052 TMEM95Q3KNT9 176 aa2.9□□□□□ -1.94
SMARCAD1-202ENST00000359052 GPR153Q6NV75 609 aa2.9□□□□□ -1.94
SMARCAD1-202ENST00000359052 TBX4P57082 545 aa2.9□□□□□ -1.95
SMARCAD1-202ENST00000359052 KRT26Q7Z3Y9 468 aa2.9□□□□□ -1.95
SMARCAD1-202ENST00000359052 KHSRPQ92945 711 aaKnown RBP eCLIP2.9□□□□□ -1.953e-7■■■■□ 24
SMARCAD1-202ENST00000359052 HLA-CQ95604 372 aa2.9□□□□□ -1.95
SMARCAD1-202ENST00000359052 CAMSAP2Q08AD1 1489 aa2.9□□□□□ -1.95
SMARCAD1-202ENST00000359052 SOX9P48436 509 aa2.9□□□□□ -1.95
SMARCAD1-202ENST00000359052 KRT72Q14CN4 511 aa2.9□□□□□ -1.95
SMARCAD1-202ENST00000359052 INAVAQ3KP66 663 aa2.9□□□□□ -1.95
SMARCAD1-202ENST00000359052 CCDC181Q5TID7 509 aa2.9□□□□□ -1.95
SMARCAD1-202ENST00000359052 TEX2Q8IWB9 1127 aa2.9□□□□□ -1.95
SMARCAD1-202ENST00000359052 KIFC2Q96AC6 838 aa2.9□□□□□ -1.95
SMARCAD1-202ENST00000359052 AVENQ9NQS1 362 aaPredicted RBP2.9□□□□□ -1.95
SMARCAD1-202ENST00000359052 COL24A1Q17RW2 1714 aa2.9□□□□□ -1.95
SMARCAD1-202ENST00000359052 ERCC6L2Q5T890 1561 aa2.9□□□□□ -1.95
SMARCAD1-202ENST00000359052 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP2.9□□□□□ -1.95
SMARCAD1-202ENST00000359052 XRCC5P13010 732 aaKnown RBP2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms