RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 CDCA7LQ96GN5 454 aa27.21■■□□□ 1.95
NPAS3-201ENST00000346562 TSPYL1Q9H0U9 437 aa27.2■■□□□ 1.95
NPAS3-201ENST00000346562 SRGAP3O43295 1099 aa27.2■■□□□ 1.94
NPAS3-201ENST00000346562 ZNF652Q9Y2D9 606 aa27.2■■□□□ 1.94
NPAS3-201ENST00000346562 PIP4K2BP78356 416 aa27.19■■□□□ 1.94
NPAS3-201ENST00000346562 BICDL1Q6ZP65 573 aa27.19■■□□□ 1.94
NPAS3-201ENST00000346562 CEP131Q9UPN4 1083 aa27.19■■□□□ 1.94
NPAS3-201ENST00000346562 TNIP1Q15025 636 aa27.19■■□□□ 1.94
NPAS3-201ENST00000346562 SPC24Q8NBT2 197 aa27.19■■□□□ 1.94
NPAS3-201ENST00000346562 CFAP45Q9UL16 551 aa27.19■■□□□ 1.94
NPAS3-201ENST00000346562 K7ELQ4 463 aaPredicted RBP27.19■■□□□ 1.94
NPAS3-201ENST00000346562 SLC12A5Q9H2X9 1139 aa27.19■■□□□ 1.94
NPAS3-201ENST00000346562 HMGN5P82970 282 aaKnown RBP27.18■■□□□ 1.94
NPAS3-201ENST00000346562 ENOX2Q16206 610 aaKnown RBP27.18■■□□□ 1.94
NPAS3-201ENST00000346562 AIDAQ96BJ3 306 aa27.18■■□□□ 1.94
NPAS3-201ENST00000346562 EHBP1L1Q8N3D4 1523 aa27.18■■□□□ 1.94
NPAS3-201ENST00000346562 IMMTQ16891 758 aaKnown RBP27.17■■□□□ 1.94
NPAS3-201ENST00000346562 ATF7IPQ6VMQ6 1270 aa27.17■■□□□ 1.94
NPAS3-201ENST00000346562 ERBINQ96RT1 1412 aa27.17■■□□□ 1.94
NPAS3-201ENST00000346562 KIAA1107Q9UPP5 1409 aa27.17■■□□□ 1.94
NPAS3-201ENST00000346562 SPATA32Q96LK8 384 aa27.17■■□□□ 1.94
NPAS3-201ENST00000346562 MVPQ14764 893 aaKnown RBP27.16■■□□□ 1.94
NPAS3-201ENST00000346562 ERLIN1O75477 346 aa27.16■■□□□ 1.94
NPAS3-201ENST00000346562 POTEJP0CG39 1038 aa27.16■■□□□ 1.94
NPAS3-201ENST00000346562 KCNH5Q8NCM2 988 aa27.16■■□□□ 1.94
NPAS3-201ENST00000346562 PPP6R1Q9UPN7 881 aa27.16■■□□□ 1.94
NPAS3-201ENST00000346562 PDIA4P13667 645 aaKnown RBP27.15■■□□□ 1.94
NPAS3-201ENST00000346562 EZRP15311 586 aaKnown RBP27.15■■□□□ 1.94
NPAS3-201ENST00000346562 CHD1LQ86WJ1 897 aa27.15■■□□□ 1.94
NPAS3-201ENST00000346562 USP5P45974 858 aa27.15■■□□□ 1.94
NPAS3-201ENST00000346562 JAKMIP1Q96N16 626 aaKnown RBP27.15■■□□□ 1.94
NPAS3-201ENST00000346562 AKAP2Q9Y2D5 859 aa27.15■■□□□ 1.94
NPAS3-201ENST00000346562 ANKRD30BQ9BXX2 1392 aa27.14■■□□□ 1.94
NPAS3-201ENST00000346562 GBP2P32456 591 aaPredicted RBP27.14■■□□□ 1.94
NPAS3-201ENST00000346562 GNAT3A8MTJ3 354 aa27.14■■□□□ 1.94
NPAS3-201ENST00000346562 JAKMIP3Q5VZ66 844 aa27.14■■□□□ 1.94
NPAS3-201ENST00000346562 ERICH3Q5RHP9 1530 aa27.14■■□□□ 1.93
NPAS3-201ENST00000346562 SEC63Q9UGP8 760 aaKnown RBP27.14■■□□□ 1.93
NPAS3-201ENST00000346562 CCDC66A2RUB6 948 aa27.14■■□□□ 1.93
NPAS3-201ENST00000346562 WDHD1O75717 1129 aaPredicted RBP27.13■■□□□ 1.93
NPAS3-201ENST00000346562 GOLGA6L7A0A1B0GV03 622 aa27.13■■□□□ 1.93
NPAS3-201ENST00000346562 PPP1R12BO60237 982 aaPredicted RBP27.12■■□□□ 1.93
NPAS3-201ENST00000346562 IDH1O75874 414 aaKnown RBP27.12■■□□□ 1.93
NPAS3-201ENST00000346562 ZNF428Q96B54 188 aa27.12■■□□□ 1.93
NPAS3-201ENST00000346562 SMTNL1A8MU46 457 aa27.12■■□□□ 1.93
NPAS3-201ENST00000346562 BCAR3O75815 825 aa27.12■■□□□ 1.93
NPAS3-201ENST00000346562 CWC27Q6UX04 472 aaKnown RBP27.12■■□□□ 1.93
NPAS3-201ENST00000346562 CAVIN4Q5BKX8 364 aa27.11■■□□□ 1.93
NPAS3-201ENST00000346562 PPP4R3AQ6IN85 833 aa27.11■■□□□ 1.93
NPAS3-201ENST00000346562 NBPF1Q3BBV0 1214 aa27.11■■□□□ 1.93
NPAS3-201ENST00000346562 ZPR1O75312 459 aa27.11■■□□□ 1.93
NPAS3-201ENST00000346562 FCHSD2O94868 740 aa27.11■■□□□ 1.93
NPAS3-201ENST00000346562 METTL24Q5JXM2 366 aa27.11■■□□□ 1.93
NPAS3-201ENST00000346562 SPINK5Q9NQ38 1064 aaPredicted RBP27.11■■□□□ 1.93
NPAS3-201ENST00000346562 EIF3JO75822 258 aaKnown RBP27.1■■□□□ 1.93
NPAS3-201ENST00000346562 TAF4BQ92750 862 aa27.1■■□□□ 1.93
NPAS3-201ENST00000346562 RRS1Q15050 365 aaKnown RBP27.09■■□□□ 1.93
NPAS3-201ENST00000346562 RPAP2Q8IXW5 612 aaPredicted RBP27.09■■□□□ 1.93
NPAS3-201ENST00000346562 CRACR2BQ8N4Y2 399 aaPredicted RBP27.09■■□□□ 1.93
NPAS3-201ENST00000346562 TMOD3Q9NYL9 352 aa27.09■■□□□ 1.93
NPAS3-201ENST00000346562 KIAA0754O94854 1291 aa27.08■■□□□ 1.93
NPAS3-201ENST00000346562 ZNF397Q8NF99 534 aaPredicted RBP27.08■■□□□ 1.93
NPAS3-201ENST00000346562 POLR3DP05423 398 aaPredicted RBP27.08■■□□□ 1.92
NPAS3-201ENST00000346562 CFTRP13569 1480 aa27.07■■□□□ 1.92
NPAS3-201ENST00000346562 EFCAB5A4FU69 1503 aa27.07■■□□□ 1.92
NPAS3-201ENST00000346562 HECW1Q76N89 1606 aa27.07■■□□□ 1.92
NPAS3-201ENST00000346562 EIF5P55010 431 aaKnown RBP27.07■■□□□ 1.92
NPAS3-201ENST00000346562 SLC26A8Q96RN1 970 aa27.07■■□□□ 1.92
NPAS3-201ENST00000346562 NUP62CLQ9H1M0 184 aa27.07■■□□□ 1.92
NPAS3-201ENST00000346562 UPF3BQ9BZI7 483 aaKnown RBP27.07■■□□□ 1.92
NPAS3-201ENST00000346562 CCDC112Q8NEF3 446 aa27.06■■□□□ 1.92
NPAS3-201ENST00000346562 NFE2L2Q16236 605 aa27.06■■□□□ 1.92
NPAS3-201ENST00000346562 IFIT1P09914 478 aaKnown RBP27.06■■□□□ 1.92
NPAS3-201ENST00000346562 CETN2P41208 172 aa27.06■■□□□ 1.92
NPAS3-201ENST00000346562 ABCF2Q9UG63 623 aa27.06■■□□□ 1.92
NPAS3-201ENST00000346562 TAX1BP1Q86VP1 789 aa27.05■■□□□ 1.92
NPAS3-201ENST00000346562 PIBF1Q8WXW3 757 aa27.05■■□□□ 1.92
NPAS3-201ENST00000346562 SCLT1Q96NL6 688 aa27.05■■□□□ 1.92
NPAS3-201ENST00000346562 IFT140Q96RY7 1462 aa27.05■■□□□ 1.92
NPAS3-201ENST00000346562 MRC2Q9UBG0 1479 aa27.05■■□□□ 1.92
NPAS3-201ENST00000346562 SSR1P43307 286 aaKnown RBP27.05■■□□□ 1.92
NPAS3-201ENST00000346562 RAB11FIP3O75154 756 aa27.04■■□□□ 1.92
NPAS3-201ENST00000346562 KIAA1328Q86T90 577 aa27.04■■□□□ 1.92
NPAS3-201ENST00000346562 XPCQ01831 940 aaPredicted RBP27.03■■□□□ 1.92
NPAS3-201ENST00000346562 IL1RAPL2Q9NP60 686 aa27.03■■□□□ 1.92
NPAS3-201ENST00000346562 U3KPZ7 1027 aaPredicted RBP27.03■■□□□ 1.92
NPAS3-201ENST00000346562 EPB41L2O43491 1005 aaKnown RBP27.03■■□□□ 1.92
NPAS3-201ENST00000346562 TSG101Q99816 390 aa27.03■■□□□ 1.92
NPAS3-201ENST00000346562 CCDC85AQ96PX6 553 aaPredicted RBP27.03■■□□□ 1.92
NPAS3-201ENST00000346562 MKNK2Q9HBH9 465 aa27.03■■□□□ 1.92
NPAS3-201ENST00000346562 ZC3H6P61129 1189 aaKnown RBP27.02■■□□□ 1.92
NPAS3-201ENST00000346562 CENPHQ9H3R5 247 aa27.02■■□□□ 1.92
NPAS3-201ENST00000346562 DAPK1P53355 1430 aa27.02■■□□□ 1.92
NPAS3-201ENST00000346562 EHMT1Q9H9B1 1298 aa27.01■■□□□ 1.91
NPAS3-201ENST00000346562 IBSPP21815 317 aaPredicted RBP27.01■■□□□ 1.91
NPAS3-201ENST00000346562 LARP1Q6PKG0 1096 aaKnown RBP27.01■■□□□ 1.91
NPAS3-201ENST00000346562 ANKIB1Q9P2G1 1089 aa27.01■■□□□ 1.91
NPAS3-201ENST00000346562 CASTP20810 708 aaKnown RBP27.01■■□□□ 1.91
NPAS3-201ENST00000346562 CUL5Q93034 780 aa27.01■■□□□ 1.91
NPAS3-201ENST00000346562 NUDT16Q96DE0 195 aaKnown RBP27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms