RNA–Protein interactions for RNA: ENST00000341547.8

LMO7-202, Transcript of LIM domain 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO7, Length 7,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-202ENST00000341547 ATF7IPQ6VMQ6 1270 aa8.75□□□□□ -1.01
LMO7-202ENST00000341547 SKAP1Q86WV1 359 aa8.75□□□□□ -1.01
LMO7-202ENST00000341547 GGNBP2Q9H3C7 697 aa8.75□□□□□ -1.01
LMO7-202ENST00000341547 RRAGDQ9NQL2 400 aaPredicted RBP8.75□□□□□ -1.01
LMO7-202ENST00000341547 URI1O94763 535 aaPredicted RBP8.75□□□□□ -1.01
LMO7-202ENST00000341547 CASQ1P31415 396 aa8.75□□□□□ -1.01
LMO7-202ENST00000341547 CFAP100Q494V2 611 aa8.75□□□□□ -1.01
LMO7-202ENST00000341547 UPF3BQ9BZI7 483 aaKnown RBP8.75□□□□□ -1.01
LMO7-202ENST00000341547 CCDC113Q9H0I3 377 aa8.75□□□□□ -1.01
LMO7-202ENST00000341547 LUC7LQ9NQ29 371 aaKnown RBP8.75□□□□□ -1.01
LMO7-202ENST00000341547 BCCIPQ9P287 314 aaKnown RBP eCLIP8.75□□□□□ -1.01
LMO7-202ENST00000341547 ADCY5O95622 1261 aa8.75□□□□□ -1.01
LMO7-202ENST00000341547 IVLP07476 585 aa8.75□□□□□ -1.01
LMO7-202ENST00000341547 MAP9Q49MG5 647 aa8.75□□□□□ -1.01
LMO7-202ENST00000341547 TSR2Q969E8 191 aaKnown RBP8.75□□□□□ -1.01
LMO7-202ENST00000341547 OGFRQ9NZT2 677 aa8.75□□□□□ -1.01
LMO7-202ENST00000341547 ERBINQ96RT1 1412 aa8.75□□□□□ -1.01
LMO7-202ENST00000341547 CCDC171Q6TFL3 1326 aa8.75□□□□□ -1.01
LMO7-202ENST00000341547 EPB41L2O43491 1005 aaKnown RBP8.75□□□□□ -1.01
LMO7-202ENST00000341547 BAG4O95429 457 aaKnown RBP8.75□□□□□ -1.01
LMO7-202ENST00000341547 MAP2K1Q02750 393 aaPredicted RBP8.75□□□□□ -1.01
LMO7-202ENST00000341547 NBPF8Q3BBV2 869 aa8.75□□□□□ -1.01
LMO7-202ENST00000341547 PAF1Q8N7H5 531 aa8.75□□□□□ -1.01
LMO7-202ENST00000341547 JMYQ8N9B5 988 aa8.75□□□□□ -1.01
LMO7-202ENST00000341547 FEZ1Q99689 392 aa8.75□□□□□ -1.01
LMO7-202ENST00000341547 CFAP45Q9UL16 551 aa8.75□□□□□ -1.01
LMO7-202ENST00000341547 PPP6R1Q9UPN7 881 aa8.75□□□□□ -1.01
LMO7-202ENST00000341547 STIM1Q13586 685 aa8.74□□□□□ -1.01
LMO7-202ENST00000341547 KRI1Q8N9T8 703 aaKnown RBP8.74□□□□□ -1.01
LMO7-202ENST00000341547 C16orf45Q96MC5 204 aaPredicted RBP8.74□□□□□ -1.01
LMO7-202ENST00000341547 CLIP2Q9UDT6 1046 aa8.74□□□□□ -1.01
LMO7-202ENST00000341547 EFCAB5A4FU69 1503 aa8.74□□□□□ -1.01
LMO7-202ENST00000341547 GNAI3P08754 354 aa8.74□□□□□ -1.01
LMO7-202ENST00000341547 NOLC1Q14978 699 aaKnown RBP eCLIP8.74□□□□□ -1.01
LMO7-202ENST00000341547 RNF187Q5TA31 235 aaPredicted RBP8.74□□□□□ -1.01
LMO7-202ENST00000341547 SRCIN1Q9C0H9 1055 aa8.74□□□□□ -1.01
LMO7-202ENST00000341547 PANK2Q9BZ23 570 aa8.74□□□□□ -1.01
LMO7-202ENST00000341547 SEPT11Q9NVA2 429 aaKnown RBP8.74□□□□□ -1.01
LMO7-202ENST00000341547 TMEM132AQ24JP5 1023 aa8.74□□□□□ -1.01
LMO7-202ENST00000341547 USP25Q9UHP3 1055 aa8.74□□□□□ -1.01
LMO7-202ENST00000341547 PRDM2Q13029 1718 aa8.74□□□□□ -1.01
LMO7-202ENST00000341547 MAP3K1Q13233 1512 aa8.74□□□□□ -1.01
LMO7-202ENST00000341547 GSDMDP57764 484 aa8.74□□□□□ -1.01
LMO7-202ENST00000341547 ARHGAP29Q52LW3 1261 aa8.74□□□□□ -1.01
LMO7-202ENST00000341547 CEP135Q66GS9 1140 aa8.74□□□□□ -1.01
LMO7-202ENST00000341547 RBM33Q96EV2 1170 aaKnown RBP8.74□□□□□ -1.01
LMO7-202ENST00000341547 GNAI2P04899 355 aa8.73□□□□□ -1.01
LMO7-202ENST00000341547 GBP2P32456 591 aaPredicted RBP8.73□□□□□ -1.01
LMO7-202ENST00000341547 NF2P35240 595 aa8.73□□□□□ -1.01
LMO7-202ENST00000341547 SIL1Q9H173 461 aa8.73□□□□□ -1.01
LMO7-202ENST00000341547 CCDC148Q8NFR7 591 aa8.73□□□□□ -1.01
LMO7-202ENST00000341547 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.73□□□□□ -1.01
LMO7-202ENST00000341547 FAM177BA6PVY3 158 aa8.73□□□□□ -1.01
LMO7-202ENST00000341547 RAI14Q9P0K7 980 aa8.73□□□□□ -1.01
LMO7-202ENST00000341547 ANKRD50Q9ULJ7 1429 aa8.73□□□□□ -1.01
LMO7-202ENST00000341547 C20orf194Q5TEA3 1177 aa8.73□□□□□ -1.01
LMO7-202ENST00000341547 ANKRD18AQ8IVF6 992 aa8.73□□□□□ -1.01
LMO7-202ENST00000341547 NUTM2GQ5VZR2 741 aa8.72□□□□□ -1.01
LMO7-202ENST00000341547 CWC27Q6UX04 472 aaKnown RBP8.72□□□□□ -1.01
LMO7-202ENST00000341547 SFPQP23246 707 aaKnown RBP eCLIP8.72□□□□□ -1.01
LMO7-202ENST00000341547 C8orf34Q49A92 452 aa8.72□□□□□ -1.01
LMO7-202ENST00000341547 VGFO15240 615 aaPredicted RBP8.72□□□□□ -1.01
LMO7-202ENST00000341547 PSME1Q06323 249 aa8.72□□□□□ -1.01
LMO7-202ENST00000341547 ZNF526Q8TF50 670 aaPredicted RBP8.72□□□□□ -1.01
LMO7-202ENST00000341547 EZRP15311 586 aaKnown RBP8.72□□□□□ -1.01
LMO7-202ENST00000341547 PDRG1Q9NUG6 133 aa8.72□□□□□ -1.01
LMO7-202ENST00000341547 ATP2B2Q01814 1243 aa8.72□□□□□ -1.01
LMO7-202ENST00000341547 JAKMIP3Q5VZ66 844 aa8.72□□□□□ -1.01
LMO7-202ENST00000341547 SNX21Q969T3 373 aa8.72□□□□□ -1.01
LMO7-202ENST00000341547 JAKMIP1Q96N16 626 aaKnown RBP8.72□□□□□ -1.01
LMO7-202ENST00000341547 TBC1D2BQ9UPU7 963 aa8.72□□□□□ -1.01
LMO7-202ENST00000341547 ANO10Q9NW15 660 aa8.71□□□□□ -1.01
LMO7-202ENST00000341547 BLOC1S2Q6QNY1 142 aa8.71□□□□□ -1.01
LMO7-202ENST00000341547 ZNF397Q8NF99 534 aaPredicted RBP8.71□□□□□ -1.01
LMO7-202ENST00000341547 DNA2P51530 1060 aa8.71□□□□□ -1.02
LMO7-202ENST00000341547 EIF5P55010 431 aaKnown RBP8.71□□□□□ -1.02
LMO7-202ENST00000341547 KIF4BQ2VIQ3 1234 aa8.71□□□□□ -1.02
LMO7-202ENST00000341547 CCDC30Q5VVM6 783 aa8.71□□□□□ -1.02
LMO7-202ENST00000341547 ERC1Q8IUD2 1116 aa8.71□□□□□ -1.02
LMO7-202ENST00000341547 SRRTQ9BXP5 876 aaKnown RBP8.71□□□□□ -1.02
LMO7-202ENST00000341547 CABP2Q9NPB3 220 aa8.71□□□□□ -1.02
LMO7-202ENST00000341547 CTAGE5O15320 804 aa8.71□□□□□ -1.02
LMO7-202ENST00000341547 FERMT3Q86UX7 667 aa8.71□□□□□ -1.02
LMO7-202ENST00000341547 NUP133Q8WUM0 1156 aa8.71□□□□□ -1.02
LMO7-202ENST00000341547 TUBB4AP04350 444 aa8.71□□□□□ -1.02
LMO7-202ENST00000341547 KLHL10Q6JEL2 608 aa8.71□□□□□ -1.02
LMO7-202ENST00000341547 PIBF1Q8WXW3 757 aa8.71□□□□□ -1.02
LMO7-202ENST00000341547 ZBTB9Q96C00 473 aa8.71□□□□□ -1.02
LMO7-202ENST00000341547 IGF1RP08069 1367 aa8.71□□□□□ -1.02
LMO7-202ENST00000341547 TWISTNBQ3B726 338 aaPredicted RBP8.71□□□□□ -1.02
LMO7-202ENST00000341547 GOLGA6L9A6NEM1 432 aa8.7□□□□□ -1.02
LMO7-202ENST00000341547 LMAN1P49257 510 aa8.7□□□□□ -1.02
LMO7-202ENST00000341547 DNAAF4Q8WXU2 420 aa8.7□□□□□ -1.02
LMO7-202ENST00000341547 GOPCQ9HD26 462 aa8.7□□□□□ -1.02
LMO7-202ENST00000341547 TDRD9Q8NDG6 1382 aaKnown RBP8.7□□□□□ -1.02
LMO7-202ENST00000341547 CAVIN2O95810 425 aa8.7□□□□□ -1.02
LMO7-202ENST00000341547 SSBP05455 408 aaKnown RBP eCLIP8.7□□□□□ -1.02
LMO7-202ENST00000341547 CASTP20810 708 aaKnown RBP8.7□□□□□ -1.02
LMO7-202ENST00000341547 SSR1P43307 286 aaKnown RBP8.7□□□□□ -1.02
LMO7-202ENST00000341547 CCT4P50991 539 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms