RNA–Protein interactions for RNA: ENST00000339844.6

ZNF28-201, Transcript of zinc finger protein 28, humanhuman

TSL 4 BASIC

Gene ZNF28, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-201ENST00000339844 ATAD2Q6PL18 1390 aa8.4□□□□□ -1.06
ZNF28-201ENST00000339844 SPATA31A6Q5VVP1 1343 aa8.4□□□□□ -1.06
ZNF28-201ENST00000339844 C2orf72A6NCS6 295 aa8.4□□□□□ -1.06
ZNF28-201ENST00000339844 NUTM2BA6NNL0 878 aaPredicted RBP8.4□□□□□ -1.06
ZNF28-201ENST00000339844 NUTM2EB1AL46 878 aaPredicted RBP8.4□□□□□ -1.06
ZNF28-201ENST00000339844 DSG2Q14126 1118 aa8.4□□□□□ -1.06
ZNF28-201ENST00000339844 MAMSTRQ6ZN01 415 aa8.4□□□□□ -1.06
ZNF28-201ENST00000339844 NUTM2AQ8IVF1 878 aaPredicted RBP8.4□□□□□ -1.06
ZNF28-201ENST00000339844 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.4□□□□□ -1.06
ZNF28-201ENST00000339844 POTEFA5A3E0 1075 aa8.39□□□□□ -1.07
ZNF28-201ENST00000339844 FOXK1P85037 733 aa8.39□□□□□ -1.07
ZNF28-201ENST00000339844 PLPP6Q8IY26 295 aa8.39□□□□□ -1.07
ZNF28-201ENST00000339844 TMC1Q8TDI8 760 aa8.39□□□□□ -1.07
ZNF28-201ENST00000339844 SLC12A5Q9H2X9 1139 aa8.39□□□□□ -1.07
ZNF28-201ENST00000339844 COL22A1Q8NFW1 1626 aaPredicted RBP8.39□□□□□ -1.07
ZNF28-201ENST00000339844 CD163L1Q9NR16 1453 aa8.38□□□□□ -1.07
ZNF28-201ENST00000339844 TMF1P82094 1093 aa8.38□□□□□ -1.07
ZNF28-201ENST00000339844 LMOD2Q6P5Q4 547 aa8.38□□□□□ -1.07
ZNF28-201ENST00000339844 CABLES1Q8TDN4 633 aa8.38□□□□□ -1.07
ZNF28-201ENST00000339844 RGS17Q9UGC6 210 aaPredicted RBP8.38□□□□□ -1.07
ZNF28-201ENST00000339844 USP6P35125 1406 aa8.37□□□□□ -1.07
ZNF28-201ENST00000339844 SSH2Q76I76 1423 aa8.37□□□□□ -1.07
ZNF28-201ENST00000339844 ALS2Q96Q42 1657 aa8.37□□□□□ -1.07
ZNF28-201ENST00000339844 MYBBP1AQ9BQG0 1328 aaKnown RBP8.37□□□□□ -1.07
ZNF28-201ENST00000339844 TCERG1O14776 1098 aaKnown RBP8.37□□□□□ -1.07
ZNF28-201ENST00000339844 ADAMTS2O95450 1211 aa8.37□□□□□ -1.07
ZNF28-201ENST00000339844 MS4A1P11836 297 aa8.37□□□□□ -1.07
ZNF28-201ENST00000339844 NUTM2GQ5VZR2 741 aa8.37□□□□□ -1.07
ZNF28-201ENST00000339844 FAM163AQ96GL9 167 aaPredicted RBP8.37□□□□□ -1.07
ZNF28-201ENST00000339844 CCDC136Q96JN2 1154 aa8.37□□□□□ -1.07
ZNF28-201ENST00000339844 PUS7Q96PZ0 661 aaKnown RBP8.37□□□□□ -1.07
ZNF28-201ENST00000339844 BCL11AQ9H165 835 aa8.37□□□□□ -1.07
ZNF28-201ENST00000339844 CPSF1Q10570 1443 aaKnown RBP8.37□□□□□ -1.07
ZNF28-201ENST00000339844 ARHGEF10O15013 1369 aa8.36□□□□□ -1.07
ZNF28-201ENST00000339844 IRX6P78412 446 aaPredicted RBP8.36□□□□□ -1.07
ZNF28-201ENST00000339844 MEX3CQ5U5Q3 659 aaKnown RBP8.36□□□□□ -1.07
ZNF28-201ENST00000339844 B4GALNT3Q6L9W6 998 aa8.36□□□□□ -1.07
ZNF28-201ENST00000339844 A0A1W2PP64 1363 aa8.35□□□□□ -1.07
ZNF28-201ENST00000339844 TTC21BQ7Z4L5 1316 aa8.35□□□□□ -1.07
ZNF28-201ENST00000339844 ANP32AP39687 249 aaKnown RBP8.35□□□□□ -1.07
ZNF28-201ENST00000339844 CAMK2BQ13554 666 aa8.35□□□□□ -1.07
ZNF28-201ENST00000339844 TPRNQ4KMQ1 711 aa8.35□□□□□ -1.07
ZNF28-201ENST00000339844 NLRP13Q86W25 1043 aa8.35□□□□□ -1.07
ZNF28-201ENST00000339844 C8orf37Q96NL8 207 aa8.35□□□□□ -1.07
ZNF28-201ENST00000339844 IPO9Q96P70 1041 aaKnown RBP8.35□□□□□ -1.07
ZNF28-201ENST00000339844 NOP58Q9Y2X3 529 aaKnown RBP8.35□□□□□ -1.07
ZNF28-201ENST00000339844 AKAP12Q02952 1782 aa8.35□□□□□ -1.07
ZNF28-201ENST00000339844 SMYD5Q6GMV2 418 aa8.34□□□□□ -1.07
ZNF28-201ENST00000339844 ABTB2Q8N961 1025 aa8.34□□□□□ -1.07
ZNF28-201ENST00000339844 NRKQ7Z2Y5 1582 aa8.34□□□□□ -1.07
ZNF28-201ENST00000339844 ABCA3Q99758 1704 aa8.34□□□□□ -1.07
ZNF28-201ENST00000339844 AFF2P51816 1311 aa8.33□□□□□ -1.08
ZNF28-201ENST00000339844 KIF3CO14782 793 aa8.33□□□□□ -1.08
ZNF28-201ENST00000339844 MAP3K9P80192 1104 aa8.33□□□□□ -1.08
ZNF28-201ENST00000339844 CDCA8Q53HL2 280 aa8.33□□□□□ -1.08
ZNF28-201ENST00000339844 POTEAQ6S8J7 498 aa8.33□□□□□ -1.08
ZNF28-201ENST00000339844 ILDR2Q71H61 639 aa8.33□□□□□ -1.08
ZNF28-201ENST00000339844 MON2Q7Z3U7 1717 aa8.33□□□□□ -1.08
ZNF28-201ENST00000339844 HDGFL2Q7Z4V5 671 aaPredicted RBP8.33□□□□□ -1.08
ZNF28-201ENST00000339844 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.33□□□□□ -1.08
ZNF28-201ENST00000339844 POLR3GLQ9BT43 218 aa8.33□□□□□ -1.08
ZNF28-201ENST00000339844 SCUBE2Q9NQ36 999 aa8.33□□□□□ -1.08
ZNF28-201ENST00000339844 CRYBG1Q9Y4K1 1723 aa8.33□□□□□ -1.08
ZNF28-201ENST00000339844 PIK3C2AO00443 1686 aa8.33□□□□□ -1.08
ZNF28-201ENST00000339844 ANKRD36BQ8N2N9 1353 aa8.33□□□□□ -1.08
ZNF28-201ENST00000339844 NINLQ9Y2I6 1382 aa8.33□□□□□ -1.08
ZNF28-201ENST00000339844 USP19O94966 1318 aa8.32□□□□□ -1.08
ZNF28-201ENST00000339844 DPYSL4O14531 572 aa8.32□□□□□ -1.08
ZNF28-201ENST00000339844 NME9Q86XW9 330 aa8.32□□□□□ -1.08
ZNF28-201ENST00000339844 UPF1Q92900 1129 aaKnown RBP eCLIP8.32□□□□□ -1.08
ZNF28-201ENST00000339844 NGLY1Q96IV0 654 aa8.32□□□□□ -1.08
ZNF28-201ENST00000339844 TERF2IPQ9NYB0 399 aa8.32□□□□□ -1.08
ZNF28-201ENST00000339844 MYOM1P52179 1685 aa8.32□□□□□ -1.08
ZNF28-201ENST00000339844 TTC21AQ8NDW8 1320 aa8.31□□□□□ -1.08
ZNF28-201ENST00000339844 EDC4Q6P2E9 1401 aaKnown RBP8.31□□□□□ -1.08
ZNF28-201ENST00000339844 FAM83GA6ND36 823 aa8.31□□□□□ -1.08
ZNF28-201ENST00000339844 SEMA3EO15041 775 aa8.31□□□□□ -1.08
ZNF28-201ENST00000339844 PER1O15534 1290 aaPredicted RBP8.31□□□□□ -1.08
ZNF28-201ENST00000339844 LCE2DQ5TA82 110 aaPredicted RBP8.31□□□□□ -1.08
ZNF28-201ENST00000339844 TMEM92Q6UXU6 159 aa8.31□□□□□ -1.08
ZNF28-201ENST00000339844 FNBP4Q8N3X1 1017 aaPredicted RBP8.31□□□□□ -1.08
ZNF28-201ENST00000339844 CARD14Q9BXL6 1004 aa8.31□□□□□ -1.08
ZNF28-201ENST00000339844 USP35Q9P2H5 1018 aa8.31□□□□□ -1.08
ZNF28-201ENST00000339844 PHRF1Q9P1Y6 1649 aaKnown RBP8.31□□□□□ -1.08
ZNF28-201ENST00000339844 PARD3Q8TEW0 1356 aa8.31□□□□□ -1.08
ZNF28-201ENST00000339844 BCL9LQ86UU0 1499 aa8.31□□□□□ -1.08
ZNF28-201ENST00000339844 SLIT2O94813 1529 aa8.3□□□□□ -1.08
ZNF28-201ENST00000339844 MARF1Q9Y4F3 1742 aaKnown RBP8.3□□□□□ -1.08
ZNF28-201ENST00000339844 TBC1D12O60347 775 aa8.3□□□□□ -1.08
ZNF28-201ENST00000339844 RRP1P56182 461 aaKnown RBP8.3□□□□□ -1.08
ZNF28-201ENST00000339844 ZC3H6P61129 1189 aaKnown RBP8.3□□□□□ -1.08
ZNF28-201ENST00000339844 CHRNA2Q15822 529 aa8.3□□□□□ -1.08
ZNF28-201ENST00000339844 USP21Q9UK80 565 aa8.3□□□□□ -1.08
ZNF28-201ENST00000339844 RCAN3Q9UKA8 241 aa8.3□□□□□ -1.08
ZNF28-201ENST00000339844 ARIH1Q9Y4X5 557 aaPredicted RBP8.3□□□□□ -1.08
ZNF28-201ENST00000339844 USP31Q70CQ4 1352 aa8.3□□□□□ -1.08
ZNF28-201ENST00000339844 KIAA0232Q92628 1395 aa8.3□□□□□ -1.08
ZNF28-201ENST00000339844 SLIT3O75094 1523 aa8.29□□□□□ -1.08
ZNF28-201ENST00000339844 SPDYE16A6NNV3 312 aaPredicted RBP8.29□□□□□ -1.08
ZNF28-201ENST00000339844 GCP02774 474 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms