RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 ABCA9Q8IUA7 1624 aa19.76■□□□□ 0.75
SCARB1-202ENST00000339570 HSP90AB2PQ58FF8 381 aa19.76■□□□□ 0.75
SCARB1-202ENST00000339570 ARHGAP45Q92619 1136 aa19.76■□□□□ 0.75
SCARB1-202ENST00000339570 SLC52A1Q9NWF4 448 aa19.76■□□□□ 0.75
SCARB1-202ENST00000339570 TMEM63CQ9P1W3 806 aa19.76■□□□□ 0.75
SCARB1-202ENST00000339570 POGZQ7Z3K3 1410 aa19.76■□□□□ 0.75
SCARB1-202ENST00000339570 CD163L1Q9NR16 1453 aa19.76■□□□□ 0.75
SCARB1-202ENST00000339570 ZC3H13Q5T200 1668 aaKnown RBP19.75■□□□□ 0.75
SCARB1-202ENST00000339570 FAM135BQ49AJ0 1406 aa19.75■□□□□ 0.75
SCARB1-202ENST00000339570 ANKRD44Q8N8A2 993 aa19.75■□□□□ 0.75
SCARB1-202ENST00000339570 IL1RAPL2Q9NP60 686 aa19.75■□□□□ 0.75
SCARB1-202ENST00000339570 ZDHHC9Q9Y397 364 aa19.75■□□□□ 0.75
SCARB1-202ENST00000339570 NUDT16Q96DE0 195 aaKnown RBP19.74■□□□□ 0.75
SCARB1-202ENST00000339570 PKNOX2Q96KN3 472 aa19.74■□□□□ 0.75
SCARB1-202ENST00000339570 ARHGEF28Q8N1W1 1705 aaKnown RBP19.74■□□□□ 0.75
SCARB1-202ENST00000339570 RRP9O43818 475 aaKnown RBP19.74■□□□□ 0.75
SCARB1-202ENST00000339570 ISY1Q9ULR0 285 aaKnown RBP19.74■□□□□ 0.75
SCARB1-202ENST00000339570 ABCC3O15438 1527 aa19.74■□□□□ 0.75
SCARB1-202ENST00000339570 DNTTIP2Q5QJE6 756 aaKnown RBP19.74■□□□□ 0.75
SCARB1-202ENST00000339570 PUS7Q96PZ0 661 aaKnown RBP19.74■□□□□ 0.75
SCARB1-202ENST00000339570 PALD1Q9ULE6 856 aa19.74■□□□□ 0.75
SCARB1-202ENST00000339570 NUTM2GQ5VZR2 741 aa19.73■□□□□ 0.75
SCARB1-202ENST00000339570 LMOD3Q0VAK6 560 aa19.73■□□□□ 0.75
SCARB1-202ENST00000339570 ZNF830Q96NB3 372 aaPredicted RBP19.73■□□□□ 0.75
SCARB1-202ENST00000339570 ZNF853P0CG23 659 aa19.73■□□□□ 0.75
SCARB1-202ENST00000339570 LTV1Q96GA3 475 aaPredicted RBP19.73■□□□□ 0.75
SCARB1-202ENST00000339570 PTMSP20962 102 aa19.72■□□□□ 0.75
SCARB1-202ENST00000339570 ERC2O15083 957 aa19.72■□□□□ 0.75
SCARB1-202ENST00000339570 REC8O95072 547 aa19.72■□□□□ 0.75
SCARB1-202ENST00000339570 TSPYL4Q9UJ04 414 aa19.72■□□□□ 0.75
SCARB1-202ENST00000339570 YEATS2Q9ULM3 1422 aa19.71■□□□□ 0.75
SCARB1-202ENST00000339570 NCBP3Q53F19 620 aaKnown RBP19.71■□□□□ 0.75
SCARB1-202ENST00000339570 DDX54Q8TDD1 881 aaKnown RBP19.71■□□□□ 0.75
SCARB1-202ENST00000339570 JARID2Q92833 1246 aaPredicted RBP19.71■□□□□ 0.75
SCARB1-202ENST00000339570 TMX3Q96JJ7 454 aa19.71■□□□□ 0.75
SCARB1-202ENST00000339570 PNPLA6Q8IY17 1366 aa19.71■□□□□ 0.75
SCARB1-202ENST00000339570 CFAP74Q9C0B2 1584 aa19.71■□□□□ 0.75
SCARB1-202ENST00000339570 RIMS2Q9UQ26 1411 aa19.71■□□□□ 0.75
SCARB1-202ENST00000339570 EIF4A2Q14240 407 aaKnown RBP19.71■□□□□ 0.75
SCARB1-202ENST00000339570 NEXMIFQ5QGS0 1516 aa19.71■□□□□ 0.75
SCARB1-202ENST00000339570 FKBP5Q13451 457 aaPredicted RBP19.7■□□□□ 0.74
SCARB1-202ENST00000339570 FRMPD1Q5SYB0 1578 aa19.69■□□□□ 0.74
SCARB1-202ENST00000339570 PTPRMP28827 1452 aa19.69■□□□□ 0.74
SCARB1-202ENST00000339570 WASLO00401 505 aaPredicted RBP19.69■□□□□ 0.74
SCARB1-202ENST00000339570 PDE1AP54750 535 aa19.69■□□□□ 0.74
SCARB1-202ENST00000339570 PTCH1Q13635 1447 aa19.69■□□□□ 0.74
SCARB1-202ENST00000339570 NUTM1Q86Y26 1132 aa19.69■□□□□ 0.74
SCARB1-202ENST00000339570 RTF1Q92541 710 aaKnown RBP19.69■□□□□ 0.74
SCARB1-202ENST00000339570 SIGLEC1Q9BZZ2 1709 aa19.68■□□□□ 0.74
SCARB1-202ENST00000339570 TSC1Q92574 1164 aa19.68■□□□□ 0.74
SCARB1-202ENST00000339570 FAM177BA6PVY3 158 aa19.68■□□□□ 0.74
SCARB1-202ENST00000339570 PPP1R9BQ96SB3 815 aa19.68■□□□□ 0.74
SCARB1-202ENST00000339570 ARAP3Q8WWN8 1544 aa19.68■□□□□ 0.74
SCARB1-202ENST00000339570 MED14O60244 1454 aa19.68■□□□□ 0.74
SCARB1-202ENST00000339570 GADD45BO75293 160 aaPredicted RBP19.68■□□□□ 0.74
SCARB1-202ENST00000339570 RPAP2Q8IXW5 612 aaPredicted RBP19.68■□□□□ 0.74
SCARB1-202ENST00000339570 C17orf53Q8N3J3 647 aaPredicted RBP19.67■□□□□ 0.74
SCARB1-202ENST00000339570 CHMP3Q9Y3E7 222 aa19.67■□□□□ 0.74
SCARB1-202ENST00000339570 UNC5CLQ8IV45 518 aa19.67■□□□□ 0.74
SCARB1-202ENST00000339570 UQCRHLA0A096LP55 91 aa19.66■□□□□ 0.74
SCARB1-202ENST00000339570 PNMA6EA0A0J9YXQ4 647 aa19.66■□□□□ 0.74
SCARB1-202ENST00000339570 UQCRHP07919 91 aa19.66■□□□□ 0.74
SCARB1-202ENST00000339570 RTL1A6NKG5 1358 aa19.66■□□□□ 0.74
SCARB1-202ENST00000339570 BCL11BQ9C0K0 894 aaPredicted RBP19.66■□□□□ 0.74
SCARB1-202ENST00000339570 HMMRO75330 724 aa19.65■□□□□ 0.74
SCARB1-202ENST00000339570 BRPF1P55201 1214 aaPredicted RBP19.65■□□□□ 0.74
SCARB1-202ENST00000339570 USP32Q8NFA0 1604 aa19.65■□□□□ 0.74
SCARB1-202ENST00000339570 C14orf37Q86TY3 774 aa19.65■□□□□ 0.74
SCARB1-202ENST00000339570 LMTK2Q8IWU2 1503 aa19.65■□□□□ 0.74
SCARB1-202ENST00000339570 TPM2P07951 284 aa19.64■□□□□ 0.74
SCARB1-202ENST00000339570 CPA1P15085 419 aa19.64■□□□□ 0.74
SCARB1-202ENST00000339570 ZNF445P59923 1031 aa19.64■□□□□ 0.74
SCARB1-202ENST00000339570 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.64■□□□□ 0.74
SCARB1-202ENST00000339570 OFD1O75665 1012 aa19.64■□□□□ 0.73
SCARB1-202ENST00000339570 MAP2P11137 1827 aaKnown RBP19.64■□□□□ 0.73
SCARB1-202ENST00000339570 CCDC61Q9Y6R9 512 aa19.64■□□□□ 0.73
SCARB1-202ENST00000339570 ZFYVE9O95405 1425 aa19.64■□□□□ 0.73
SCARB1-202ENST00000339570 MYO5BQ9ULV0 1848 aa19.63■□□□□ 0.73
SCARB1-202ENST00000339570 CYP2E1P05181 493 aaPredicted RBP19.63■□□□□ 0.73
SCARB1-202ENST00000339570 EIF2S2P20042 333 aaKnown RBP19.63■□□□□ 0.73
SCARB1-202ENST00000339570 CWC22Q9HCG8 908 aaKnown RBP19.63■□□□□ 0.73
SCARB1-202ENST00000339570 STK31Q9BXU1 1019 aa19.62■□□□□ 0.73
SCARB1-202ENST00000339570 IL25Q9H293 177 aa19.62■□□□□ 0.73
SCARB1-202ENST00000339570 PRDM10Q9NQV6 1147 aa19.62■□□□□ 0.73
SCARB1-202ENST00000339570 CYB5RLQ6IPT4 315 aa19.62■□□□□ 0.73
SCARB1-202ENST00000339570 LRRFIP2Q9Y608 721 aaKnown RBP19.62■□□□□ 0.73
SCARB1-202ENST00000339570 LRSAM1Q6UWE0 723 aa19.61■□□□□ 0.73
SCARB1-202ENST00000339570 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.61■□□□□ 0.73
SCARB1-202ENST00000339570 NEURL4Q96JN8 1562 aa19.61■□□□□ 0.73
SCARB1-202ENST00000339570 PIK3R4Q99570 1358 aa19.61■□□□□ 0.73
SCARB1-202ENST00000339570 PIK3C2BO00750 1634 aa19.61■□□□□ 0.73
SCARB1-202ENST00000339570 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.61■□□□□ 0.73
SCARB1-202ENST00000339570 MX1P20591 662 aa19.61■□□□□ 0.73
SCARB1-202ENST00000339570 MTHFSDQ2M296 383 aaKnown RBP19.61■□□□□ 0.73
SCARB1-202ENST00000339570 LRRCC1Q9C099 1032 aa19.61■□□□□ 0.73
SCARB1-202ENST00000339570 CHL1O00533 1208 aa19.6■□□□□ 0.73
SCARB1-202ENST00000339570 GNAI2P04899 355 aa19.6■□□□□ 0.73
SCARB1-202ENST00000339570 ESYT1Q9BSJ8 1104 aa19.6■□□□□ 0.73
SCARB1-202ENST00000339570 ESF1Q9H501 851 aaKnown RBP19.6■□□□□ 0.73
SCARB1-202ENST00000339570 USP25Q9UHP3 1055 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms