RNA–Protein interactions for RNA: ENST00000337907.7

RERE-201, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 8,026 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-201ENST00000337907 KIF2AO00139 706 aaPredicted RBP14.88□□□□□ -0.03
RERE-201ENST00000337907 SREK1Q8WXA9 508 aaKnown RBP14.88□□□□□ -0.03
RERE-201ENST00000337907 LRRC45Q96CN5 670 aa14.88□□□□□ -0.03
RERE-201ENST00000337907 UPF3BQ9BZI7 483 aaKnown RBP14.88□□□□□ -0.03
RERE-201ENST00000337907 SPATA32Q96LK8 384 aa14.88□□□□□ -0.03
RERE-201ENST00000337907 GOPCQ9HD26 462 aa14.88□□□□□ -0.03
RERE-201ENST00000337907 STK3Q13188 491 aa14.88□□□□□ -0.03
RERE-201ENST00000337907 NLRP6P59044 892 aa14.88□□□□□ -0.03
RERE-201ENST00000337907 LARP1BQ659C4 914 aaKnown RBP14.87□□□□□ -0.03
RERE-201ENST00000337907 FAM107BQ9H098 131 aa14.87□□□□□ -0.03
RERE-201ENST00000337907 SCAPERQ9BY12 1400 aa14.87□□□□□ -0.03
RERE-201ENST00000337907 USP5P45974 858 aa14.87□□□□□ -0.03
RERE-201ENST00000337907 RAB34Q9BZG1 259 aa14.87□□□□□ -0.03
RERE-201ENST00000337907 CTNNA2P26232 953 aa14.87□□□□□ -0.03
RERE-201ENST00000337907 PDCL2Q8N4E4 241 aa14.86□□□□□ -0.03
RERE-201ENST00000337907 CCDC7Q96M83 1385 aa14.86□□□□□ -0.03
RERE-201ENST00000337907 CASQ1P31415 396 aa14.86□□□□□ -0.03
RERE-201ENST00000337907 CCDC178Q5BJE1 867 aa14.86□□□□□ -0.03
RERE-201ENST00000337907 SPG7Q9UQ90 795 aa14.86□□□□□ -0.03
RERE-201ENST00000337907 FHOD3Q2V2M9 1422 aa14.86□□□□□ -0.03
RERE-201ENST00000337907 ZWINTO95229 277 aa14.86□□□□□ -0.03
RERE-201ENST00000337907 FKBP4Q02790 459 aaKnown RBP eCLIP14.86□□□□□ -0.03
RERE-201ENST00000337907 LUZP1Q86V48 1076 aa14.86□□□□□ -0.03
RERE-201ENST00000337907 ZSCAN12O43309 604 aa14.86□□□□□ -0.03
RERE-201ENST00000337907 CACNA2D4Q7Z3S7 1137 aa14.86□□□□□ -0.03
RERE-201ENST00000337907 FYCO1Q9BQS8 1478 aa14.85□□□□□ -0.03
RERE-201ENST00000337907 STRN4Q9NRL3 753 aa14.85□□□□□ -0.03
RERE-201ENST00000337907 KIF5CO60282 957 aa14.85□□□□□ -0.03
RERE-201ENST00000337907 C6orf163Q5TEZ5 329 aa14.85□□□□□ -0.03
RERE-201ENST00000337907 UBE4AQ14139 1066 aa14.85□□□□□ -0.03
RERE-201ENST00000337907 DDX12PQ92771 950 aa14.85□□□□□ -0.03
RERE-201ENST00000337907 ZSCAN31Q96LW9 406 aaPredicted RBP14.85□□□□□ -0.03
RERE-201ENST00000337907 PHAXQ9H814 394 aaKnown RBP14.85□□□□□ -0.03
RERE-201ENST00000337907 PANK1Q8TE04 598 aa14.85□□□□□ -0.03
RERE-201ENST00000337907 CUL5Q93034 780 aa14.85□□□□□ -0.03
RERE-201ENST00000337907 CTNNBL1Q8WYA6 563 aaPredicted RBP14.85□□□□□ -0.03
RERE-201ENST00000337907 CETN1Q12798 172 aa14.84□□□□□ -0.03
RERE-201ENST00000337907 KIF20AO95235 890 aa14.84□□□□□ -0.03
RERE-201ENST00000337907 IGHMBP2P38935 993 aaKnown RBP14.84□□□□□ -0.03
RERE-201ENST00000337907 NUTM2GQ5VZR2 741 aa14.84□□□□□ -0.03
RERE-201ENST00000337907 BLOC1S2Q6QNY1 142 aa14.84□□□□□ -0.03
RERE-201ENST00000337907 NUP62CLQ9H1M0 184 aa14.84□□□□□ -0.03
RERE-201ENST00000337907 LRP2BPQ9P2M1 347 aa14.84□□□□□ -0.03
RERE-201ENST00000337907 PIBF1Q8WXW3 757 aa14.84□□□□□ -0.03
RERE-201ENST00000337907 UBXN4Q92575 508 aa14.84□□□□□ -0.03
RERE-201ENST00000337907 MRPS9P82933 396 aaKnown RBP14.83□□□□□ -0.03
RERE-201ENST00000337907 CCDC83Q8IWF9 413 aa14.83□□□□□ -0.04
RERE-201ENST00000337907 TMEM266Q2M3C6 531 aa14.83□□□□□ -0.04
RERE-201ENST00000337907 RAI14Q9P0K7 980 aa14.83□□□□□ -0.04
RERE-201ENST00000337907 ESCO1Q5FWF5 840 aa14.83□□□□□ -0.04
RERE-201ENST00000337907 NAA15Q9BXJ9 866 aaKnown RBP14.83□□□□□ -0.04
RERE-201ENST00000337907 PPP6R1Q9UPN7 881 aa14.83□□□□□ -0.04
RERE-201ENST00000337907 TDRD9Q8NDG6 1382 aaKnown RBP14.82□□□□□ -0.04
RERE-201ENST00000337907 CFAP100Q494V2 611 aa14.82□□□□□ -0.04
RERE-201ENST00000337907 UQCRHLA0A096LP55 91 aa14.82□□□□□ -0.04
RERE-201ENST00000337907 USO1O60763 962 aaKnown RBP14.82□□□□□ -0.04
RERE-201ENST00000337907 UQCRHP07919 91 aa14.82□□□□□ -0.04
RERE-201ENST00000337907 CCDC175P0C221 793 aa14.82□□□□□ -0.04
RERE-201ENST00000337907 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.82□□□□□ -0.043e-6■□□□□ 9.3
RERE-201ENST00000337907 V9GYY5 206 aaPredicted RBP14.82□□□□□ -0.04
RERE-201ENST00000337907 ZNF652Q9Y2D9 606 aa14.82□□□□□ -0.04
RERE-201ENST00000337907 FSD2A1L4K1 749 aa14.82□□□□□ -0.04
RERE-201ENST00000337907 MPHOSPH6Q99547 160 aaKnown RBP14.82□□□□□ -0.04
RERE-201ENST00000337907 PDRG1Q9NUG6 133 aa14.82□□□□□ -0.04
RERE-201ENST00000337907 BMS1Q14692 1282 aaKnown RBP14.81□□□□□ -0.04
RERE-201ENST00000337907 HDGFL1Q5TGJ6 251 aa14.81□□□□□ -0.04
RERE-201ENST00000337907 CRACR2BQ8N4Y2 399 aaPredicted RBP14.81□□□□□ -0.04
RERE-201ENST00000337907 K7ELQ4 463 aaPredicted RBP14.81□□□□□ -0.04
RERE-201ENST00000337907 SIL1Q9H173 461 aa14.81□□□□□ -0.04
RERE-201ENST00000337907 CCDC196A0A1B0GTZ2 297 aa14.81□□□□□ -0.04
RERE-201ENST00000337907 SPECC1LQ69YQ0 1117 aa14.81□□□□□ -0.04
RERE-201ENST00000337907 RAB3IL1Q8TBN0 382 aa14.81□□□□□ -0.04
RERE-201ENST00000337907 TTC21AQ8NDW8 1320 aa14.8□□□□□ -0.04
RERE-201ENST00000337907 BBXQ8WY36 941 aaPredicted RBP14.8□□□□□ -0.04
RERE-201ENST00000337907 AIDAQ96BJ3 306 aa14.8□□□□□ -0.04
RERE-201ENST00000337907 JPH4Q96JJ6 628 aa14.8□□□□□ -0.04
RERE-201ENST00000337907 TOM1L2Q6ZVM7 507 aa14.8□□□□□ -0.04
RERE-201ENST00000337907 PAFAH1B1P43034 410 aa14.8□□□□□ -0.04
RERE-201ENST00000337907 RBM10P98175 930 aaKnown RBP14.8□□□□□ -0.04
RERE-201ENST00000337907 TWISTNBQ3B726 338 aaPredicted RBP14.8□□□□□ -0.04
RERE-201ENST00000337907 BCCIPQ9P287 314 aaKnown RBP eCLIP14.8□□□□□ -0.04
RERE-201ENST00000337907 CHMP4BP1P59074 171 aa14.79□□□□□ -0.04
RERE-201ENST00000337907 IKBKGQ9Y6K9 419 aa14.79□□□□□ -0.04
RERE-201ENST00000337907 POLR3GO15318 223 aaPredicted RBP14.79□□□□□ -0.04
RERE-201ENST00000337907 ALS2CR12Q96Q35 445 aa14.79□□□□□ -0.04
RERE-201ENST00000337907 AACSQ86V21 672 aa14.79□□□□□ -0.04
RERE-201ENST00000337907 TICAM2Q86XR7 235 aa14.79□□□□□ -0.04
RERE-201ENST00000337907 STXBP4Q6ZWJ1 553 aa14.79□□□□□ -0.04
RERE-201ENST00000337907 SLF2Q8IX21 1173 aa14.79□□□□□ -0.04
RERE-201ENST00000337907 MAP3K11Q16584 847 aa14.79□□□□□ -0.04
RERE-201ENST00000337907 PSMD1Q99460 953 aa14.79□□□□□ -0.04
RERE-201ENST00000337907 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.79□□□□□ -0.04
RERE-201ENST00000337907 ERICH4A6NGS2 130 aa14.79□□□□□ -0.04
RERE-201ENST00000337907 MACROD2A1Z1Q3 448 aa14.78□□□□□ -0.04
RERE-201ENST00000337907 POTEB2H3BUK9 544 aa14.78□□□□□ -0.04
RERE-201ENST00000337907 LMAN1P49257 510 aa14.78□□□□□ -0.04
RERE-201ENST00000337907 MTHFSP49914 203 aa14.78□□□□□ -0.04
RERE-201ENST00000337907 CAVIN4Q5BKX8 364 aa14.78□□□□□ -0.04
RERE-201ENST00000337907 U3KPZ7 1027 aaPredicted RBP14.78□□□□□ -0.04
RERE-201ENST00000337907 PTPRGP23470 1445 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms