RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 ATP10DQ9P241 1426 aa29.12■■■□□ 2.25
NDEL1-201ENST00000334527 FMN2Q9NZ56 1722 aa29.12■■■□□ 2.25
NDEL1-201ENST00000334527 CDC45O75419 566 aa29.11■■■□□ 2.25
NDEL1-201ENST00000334527 ANKRD44Q8N8A2 993 aa29.11■■■□□ 2.25
NDEL1-201ENST00000334527 PTPRCP08575 1304 aa29.11■■■□□ 2.25
NDEL1-201ENST00000334527 PLEKHM2Q8IWE5 1019 aa29.11■■■□□ 2.25
NDEL1-201ENST00000334527 MSH6P52701 1360 aa29.1■■■□□ 2.25
NDEL1-201ENST00000334527 GSPT1P15170 499 aaKnown RBP29.1■■■□□ 2.25
NDEL1-201ENST00000334527 HSP90AB1P08238 724 aaKnown RBP29.09■■■□□ 2.25
NDEL1-201ENST00000334527 DDIT3P35638 169 aa29.09■■■□□ 2.25
NDEL1-201ENST00000334527 RIMS1Q86UR5 1692 aaKnown RBP29.08■■■□□ 2.25
NDEL1-201ENST00000334527 FOXO3O43524 673 aa29.08■■■□□ 2.25
NDEL1-201ENST00000334527 RPAP2Q8IXW5 612 aaPredicted RBP29.08■■■□□ 2.25
NDEL1-201ENST00000334527 MIS18AQ9NYP9 233 aa29.08■■■□□ 2.25
NDEL1-201ENST00000334527 FLT4P35916 1363 aa29.08■■■□□ 2.25
NDEL1-201ENST00000334527 MTHFSDQ2M296 383 aaKnown RBP29.08■■■□□ 2.25
NDEL1-201ENST00000334527 CEP85Q6P2H3 762 aa29.08■■■□□ 2.25
NDEL1-201ENST00000334527 SBNO1A3KN83 1393 aa29.07■■■□□ 2.24
NDEL1-201ENST00000334527 SLC4A2P04920 1241 aa29.06■■■□□ 2.24
NDEL1-201ENST00000334527 NGDNQ8NEJ9 315 aaKnown RBP29.06■■■□□ 2.24
NDEL1-201ENST00000334527 RTF1Q92541 710 aaKnown RBP29.06■■■□□ 2.24
NDEL1-201ENST00000334527 RTL1A6NKG5 1358 aa29.06■■■□□ 2.24
NDEL1-201ENST00000334527 TTC22Q5TAA0 569 aa29.05■■■□□ 2.24
NDEL1-201ENST00000334527 C16orf71Q8IYS4 520 aaPredicted RBP29.05■■■□□ 2.24
NDEL1-201ENST00000334527 RGPD8O14715 1765 aaPredicted RBP29.04■■■□□ 2.24
NDEL1-201ENST00000334527 SLIT1O75093 1534 aa29.04■■■□□ 2.24
NDEL1-201ENST00000334527 DIP2AQ14689 1571 aa29.04■■■□□ 2.24
NDEL1-201ENST00000334527 MEIS3Q99687 375 aa29.04■■■□□ 2.24
NDEL1-201ENST00000334527 TSPYL4Q9UJ04 414 aa29.04■■■□□ 2.24
NDEL1-201ENST00000334527 TBX22Q9Y458 520 aa29.04■■■□□ 2.24
NDEL1-201ENST00000334527 L1TD1Q5T7N2 865 aaKnown RBP29.04■■■□□ 2.24
NDEL1-201ENST00000334527 CD2BP2O95400 341 aaKnown RBP29.03■■■□□ 2.24
NDEL1-201ENST00000334527 AMPHP49418 695 aa29.03■■■□□ 2.24
NDEL1-201ENST00000334527 PLPPR3Q6T4P5 718 aa29.03■■■□□ 2.24
NDEL1-201ENST00000334527 ARHGAP23Q9P227 1491 aa29.03■■■□□ 2.24
NDEL1-201ENST00000334527 KDRP35968 1356 aa29.02■■■□□ 2.24
NDEL1-201ENST00000334527 TRAK2O60296 914 aa29.01■■■□□ 2.23
NDEL1-201ENST00000334527 RBM42Q9BTD8 480 aaKnown RBP29.01■■■□□ 2.23
NDEL1-201ENST00000334527 EYA1Q99502 592 aa29.01■■■□□ 2.23
NDEL1-201ENST00000334527 CEP170BQ9Y4F5 1589 aaPredicted RBP29■■■□□ 2.23
NDEL1-201ENST00000334527 PIK3C2AO00443 1686 aa29■■■□□ 2.23
NDEL1-201ENST00000334527 IGSF1Q8N6C5 1336 aa29■■■□□ 2.23
NDEL1-201ENST00000334527 GZF1Q9H116 711 aaPredicted RBP29■■■□□ 2.23
NDEL1-201ENST00000334527 CIZ1Q9ULV3 898 aaPredicted RBP29■■■□□ 2.23
NDEL1-201ENST00000334527 DDX11L8A8MPP1 907 aa28.99■■■□□ 2.23
NDEL1-201ENST00000334527 OTUD7AQ8TE49 926 aaPredicted RBP28.99■■■□□ 2.23
NDEL1-201ENST00000334527 K7ELQ4 463 aaPredicted RBP28.99■■■□□ 2.23
NDEL1-201ENST00000334527 APBB1O00213 710 aa28.98■■■□□ 2.23
NDEL1-201ENST00000334527 EIF5BO60841 1220 aaKnown RBP28.98■■■□□ 2.23
NDEL1-201ENST00000334527 HSP90AA1P07900 732 aaKnown RBP28.98■■■□□ 2.23
NDEL1-201ENST00000334527 GAS2L2Q8NHY3 880 aa28.98■■■□□ 2.23
NDEL1-201ENST00000334527 SMARCA5O60264 1052 aaPredicted RBP28.98■■■□□ 2.23
NDEL1-201ENST00000334527 G2E3Q7L622 706 aa28.98■■■□□ 2.23
NDEL1-201ENST00000334527 SLC4A10Q6U841 1118 aa28.97■■■□□ 2.23
NDEL1-201ENST00000334527 TNPO1Q92973 898 aaKnown RBP28.96■■■□□ 2.23
NDEL1-201ENST00000334527 F6X3S4 739 aa28.95■■■□□ 2.23
NDEL1-201ENST00000334527 FOXD4L1Q9NU39 408 aa28.95■■■□□ 2.23
NDEL1-201ENST00000334527 NLRP6P59044 892 aa28.95■■■□□ 2.22
NDEL1-201ENST00000334527 GOLGA6L3A6NEY3 463 aa28.94■■■□□ 2.22
NDEL1-201ENST00000334527 CCT4P50991 539 aaKnown RBP28.94■■■□□ 2.22
NDEL1-201ENST00000334527 RAB3GAP1Q15042 981 aa28.93■■■□□ 2.22
NDEL1-201ENST00000334527 ARXQ96QS3 562 aa28.93■■■□□ 2.22
NDEL1-201ENST00000334527 HMMRO75330 724 aa28.93■■■□□ 2.22
NDEL1-201ENST00000334527 SDSP20132 328 aa28.93■■■□□ 2.22
NDEL1-201ENST00000334527 THEMISQ8N1K5 641 aaPredicted RBP28.92■■■□□ 2.22
NDEL1-201ENST00000334527 FSD2A1L4K1 749 aa28.91■■■□□ 2.22
NDEL1-201ENST00000334527 STK31Q9BXU1 1019 aa28.91■■■□□ 2.22
NDEL1-201ENST00000334527 GBP4Q96PP9 640 aa28.9■■■□□ 2.22
NDEL1-201ENST00000334527 XRN1Q8IZH2 1706 aaKnown RBP28.9■■■□□ 2.22
NDEL1-201ENST00000334527 HTATSF1O43719 755 aaKnown RBP28.9■■■□□ 2.22
NDEL1-201ENST00000334527 NUTM2GQ5VZR2 741 aa28.9■■■□□ 2.22
NDEL1-201ENST00000334527 USP26Q9BXU7 913 aa28.9■■■□□ 2.22
NDEL1-201ENST00000334527 LRRC37A3O60309 1634 aa28.89■■■□□ 2.22
NDEL1-201ENST00000334527 HOXC9P31274 260 aa28.89■■■□□ 2.21
NDEL1-201ENST00000334527 RABEP1Q15276 862 aa28.89■■■□□ 2.21
NDEL1-201ENST00000334527 CASC1Q6TDU7 716 aa28.89■■■□□ 2.21
NDEL1-201ENST00000334527 ANKARQ7Z5J8 1434 aa28.88■■■□□ 2.21
NDEL1-201ENST00000334527 FER1L4A9Z1Z3 1794 aa28.88■■■□□ 2.21
NDEL1-201ENST00000334527 GNAT3A8MTJ3 354 aa28.88■■■□□ 2.21
NDEL1-201ENST00000334527 XRCC6P12956 609 aaKnown RBP eCLIP28.87■■■□□ 2.21
NDEL1-201ENST00000334527 KCNA6P17658 529 aa28.86■■■□□ 2.21
NDEL1-201ENST00000334527 MARF1Q9Y4F3 1742 aaKnown RBP28.86■■■□□ 2.21
NDEL1-201ENST00000334527 GNAI2P04899 355 aa28.85■■■□□ 2.21
NDEL1-201ENST00000334527 FAM208AQ9UK61 1670 aaKnown RBP28.85■■■□□ 2.21
NDEL1-201ENST00000334527 CCDC30Q5VVM6 783 aa28.84■■■□□ 2.21
NDEL1-201ENST00000334527 FAM43AQ8N2R8 423 aa28.84■■■□□ 2.21
NDEL1-201ENST00000334527 FLIIQ13045 1269 aa28.84■■■□□ 2.21
NDEL1-201ENST00000334527 NWD1Q149M9 1564 aa28.83■■■□□ 2.21
NDEL1-201ENST00000334527 FKBP5Q13451 457 aaPredicted RBP28.83■■■□□ 2.21
NDEL1-201ENST00000334527 NECTIN2Q92692 538 aa28.83■■■□□ 2.21
NDEL1-201ENST00000334527 ABTB2Q8N961 1025 aa28.82■■■□□ 2.2
NDEL1-201ENST00000334527 LTV1Q96GA3 475 aaPredicted RBP28.82■■■□□ 2.2
NDEL1-201ENST00000334527 MAP3K5Q99683 1374 aa28.82■■■□□ 2.2
NDEL1-201ENST00000334527 OSBPL3Q9H4L5 887 aa28.81■■■□□ 2.2
NDEL1-201ENST00000334527 PDE1AP54750 535 aa28.8■■■□□ 2.2
NDEL1-201ENST00000334527 IL17REQ8NFR9 667 aa28.8■■■□□ 2.2
NDEL1-201ENST00000334527 EXOC6BQ9Y2D4 811 aa28.8■■■□□ 2.2
NDEL1-201ENST00000334527 SSFA2P28290 1259 aa28.8■■■□□ 2.2
NDEL1-201ENST00000334527 USP54Q70EL1 1684 aa28.79■■■□□ 2.2
NDEL1-201ENST00000334527 REC8O95072 547 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms