RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 USP6P35125 1406 aa16.75■□□□□ 0.27
TUBA1B-201ENST00000332858 INTS3Q68E01 1043 aaKnown RBP16.75■□□□□ 0.27
TUBA1B-201ENST00000332858 PLEKHM2Q8IWE5 1019 aa16.75■□□□□ 0.27
TUBA1B-201ENST00000332858 DCTPP1Q9H773 170 aa16.75■□□□□ 0.27
TUBA1B-201ENST00000332858 FOXD4L1Q9NU39 408 aa16.75■□□□□ 0.27
TUBA1B-201ENST00000332858 KIF13AQ9H1H9 1805 aa16.75■□□□□ 0.27
TUBA1B-201ENST00000332858 MAP3K19Q56UN5 1328 aa16.75■□□□□ 0.27
TUBA1B-201ENST00000332858 APBB1O00213 710 aa16.75■□□□□ 0.27
TUBA1B-201ENST00000332858 DDIT3P35638 169 aa16.75■□□□□ 0.27
TUBA1B-201ENST00000332858 NRKQ7Z2Y5 1582 aa16.74■□□□□ 0.27
TUBA1B-201ENST00000332858 MTHFSDQ2M296 383 aaKnown RBP16.73■□□□□ 0.27
TUBA1B-201ENST00000332858 SNX21Q969T3 373 aa16.73■□□□□ 0.27
TUBA1B-201ENST00000332858 MEIS3Q99687 375 aa16.73■□□□□ 0.27
TUBA1B-201ENST00000332858 SMARCA5O60264 1052 aaPredicted RBP16.73■□□□□ 0.27
TUBA1B-201ENST00000332858 SLC4A2P04920 1241 aa16.73■□□□□ 0.27
TUBA1B-201ENST00000332858 G2E3Q7L622 706 aa16.73■□□□□ 0.27
TUBA1B-201ENST00000332858 AMOTL2Q9Y2J4 779 aa16.73■□□□□ 0.27
TUBA1B-201ENST00000332858 NCOA3Q9Y6Q9 1424 aa16.73■□□□□ 0.27
TUBA1B-201ENST00000332858 ATP10DQ9P241 1426 aa16.72■□□□□ 0.27
TUBA1B-201ENST00000332858 MSH6P52701 1360 aa16.72■□□□□ 0.27
TUBA1B-201ENST00000332858 CEP85Q6P2H3 762 aa16.72■□□□□ 0.27
TUBA1B-201ENST00000332858 CRB1P82279 1406 aa16.71■□□□□ 0.27
TUBA1B-201ENST00000332858 F6X3S4 739 aa16.71■□□□□ 0.27
TUBA1B-201ENST00000332858 ANKRD44Q8N8A2 993 aa16.71■□□□□ 0.27
TUBA1B-201ENST00000332858 PLEKHG1Q9ULL1 1385 aa16.71■□□□□ 0.27
TUBA1B-201ENST00000332858 USP31Q70CQ4 1352 aa16.7■□□□□ 0.26
TUBA1B-201ENST00000332858 SSH2Q76I76 1423 aa16.7■□□□□ 0.26
TUBA1B-201ENST00000332858 RIMS1Q86UR5 1692 aaKnown RBP16.7■□□□□ 0.26
TUBA1B-201ENST00000332858 TRAK2O60296 914 aa16.7■□□□□ 0.26
TUBA1B-201ENST00000332858 HSP90AB1P08238 724 aaKnown RBP16.7■□□□□ 0.26
TUBA1B-201ENST00000332858 CDC45O75419 566 aa16.69■□□□□ 0.26
TUBA1B-201ENST00000332858 RTL1A6NKG5 1358 aa16.69■□□□□ 0.26
TUBA1B-201ENST00000332858 TOPAZ1Q8N9V7 1692 aa16.69■□□□□ 0.26
TUBA1B-201ENST00000332858 NUTM2GQ5VZR2 741 aa16.69■□□□□ 0.26
TUBA1B-201ENST00000332858 TNPO1Q92973 898 aaKnown RBP16.69■□□□□ 0.26
TUBA1B-201ENST00000332858 KIF24Q5T7B8 1368 aa16.69■□□□□ 0.26
TUBA1B-201ENST00000332858 KIAA0232Q92628 1395 aa16.69■□□□□ 0.26
TUBA1B-201ENST00000332858 EYA1Q99502 592 aa16.69■□□□□ 0.26
TUBA1B-201ENST00000332858 TTC22Q5TAA0 569 aa16.68■□□□□ 0.26
TUBA1B-201ENST00000332858 SLC4A10Q6U841 1118 aa16.68■□□□□ 0.26
TUBA1B-201ENST00000332858 RGPD1P0DJD0 1748 aa16.68■□□□□ 0.26
TUBA1B-201ENST00000332858 NGDNQ8NEJ9 315 aaKnown RBP16.68■□□□□ 0.26
TUBA1B-201ENST00000332858 TSPYL4Q9UJ04 414 aa16.68■□□□□ 0.26
TUBA1B-201ENST00000332858 XRCC6P12956 609 aaKnown RBP eCLIP16.67■□□□□ 0.262e-7■■□□□ 13.8
TUBA1B-201ENST00000332858 RPAP2Q8IXW5 612 aaPredicted RBP16.67■□□□□ 0.26
TUBA1B-201ENST00000332858 NALCNQ8IZF0 1738 aa16.66■□□□□ 0.26
TUBA1B-201ENST00000332858 GAS2L2Q8NHY3 880 aa16.66■□□□□ 0.26
TUBA1B-201ENST00000332858 PANK2Q9BZ23 570 aa16.66■□□□□ 0.26
TUBA1B-201ENST00000332858 RGPD8O14715 1765 aaPredicted RBP16.66■□□□□ 0.26
TUBA1B-201ENST00000332858 PTPRCP08575 1304 aa16.65■□□□□ 0.26
TUBA1B-201ENST00000332858 AMPHP49418 695 aa16.65■□□□□ 0.26
TUBA1B-201ENST00000332858 NECTIN2Q92692 538 aa16.65■□□□□ 0.26
TUBA1B-201ENST00000332858 EID1Q9Y6B2 187 aa16.65■□□□□ 0.26
TUBA1B-201ENST00000332858 CEP170BQ9Y4F5 1589 aaPredicted RBP16.65■□□□□ 0.26
TUBA1B-201ENST00000332858 K7ELQ4 463 aaPredicted RBP16.65■□□□□ 0.26
TUBA1B-201ENST00000332858 SDSP20132 328 aa16.65■□□□□ 0.26
TUBA1B-201ENST00000332858 RTF1Q92541 710 aaKnown RBP16.65■□□□□ 0.26
TUBA1B-201ENST00000332858 FSD2A1L4K1 749 aa16.65■□□□□ 0.26
TUBA1B-201ENST00000332858 HSP90AA1P07900 732 aaKnown RBP16.64■□□□□ 0.25
TUBA1B-201ENST00000332858 ARHGEF10O15013 1369 aa16.63■□□□□ 0.25
TUBA1B-201ENST00000332858 FLT4P35916 1363 aa16.63■□□□□ 0.25
TUBA1B-201ENST00000332858 NLRP6P59044 892 aa16.63■□□□□ 0.25
TUBA1B-201ENST00000332858 RAB3GAP1Q15042 981 aa16.63■□□□□ 0.25
TUBA1B-201ENST00000332858 GOLGA6L3A6NEY3 463 aa16.63■□□□□ 0.25
TUBA1B-201ENST00000332858 HAP1P54257 671 aaPredicted RBP16.63■□□□□ 0.25
TUBA1B-201ENST00000332858 USP26Q9BXU7 913 aa16.63■□□□□ 0.25
TUBA1B-201ENST00000332858 SBNO1A3KN83 1393 aa16.63■□□□□ 0.25
TUBA1B-201ENST00000332858 KDRP35968 1356 aa16.62■□□□□ 0.25
TUBA1B-201ENST00000332858 IGSF1Q8N6C5 1336 aa16.62■□□□□ 0.25
TUBA1B-201ENST00000332858 TTC21AQ8NDW8 1320 aa16.62■□□□□ 0.25
TUBA1B-201ENST00000332858 L1TD1Q5T7N2 865 aaKnown RBP16.62■□□□□ 0.25
TUBA1B-201ENST00000332858 TSHZ3Q63HK5 1081 aa16.62■□□□□ 0.25
TUBA1B-201ENST00000332858 LTV1Q96GA3 475 aaPredicted RBP16.61■□□□□ 0.25
TUBA1B-201ENST00000332858 TBX22Q9Y458 520 aa16.61■□□□□ 0.25
TUBA1B-201ENST00000332858 SSFA2P28290 1259 aa16.61■□□□□ 0.25
TUBA1B-201ENST00000332858 AK9Q5TCS8 1911 aa16.61■□□□□ 0.25
TUBA1B-201ENST00000332858 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.61■□□□□ 0.25
TUBA1B-201ENST00000332858 DDX11L8A8MPP1 907 aa16.6■□□□□ 0.25
TUBA1B-201ENST00000332858 EXOC6BQ9Y2D4 811 aa16.6■□□□□ 0.25
TUBA1B-201ENST00000332858 CIZ1Q9ULV3 898 aaPredicted RBP16.6■□□□□ 0.25
TUBA1B-201ENST00000332858 KCNA6P17658 529 aa16.59■□□□□ 0.25
TUBA1B-201ENST00000332858 IL17REQ8NFR9 667 aa16.59■□□□□ 0.25
TUBA1B-201ENST00000332858 FMN2Q9NZ56 1722 aa16.59■□□□□ 0.25
TUBA1B-201ENST00000332858 USHBP1Q8N6Y0 703 aa16.59■□□□□ 0.25
TUBA1B-201ENST00000332858 UBE2Q2Q8WVN8 375 aa16.59■□□□□ 0.25
TUBA1B-201ENST00000332858 RBM33Q96EV2 1170 aaKnown RBP16.59■□□□□ 0.25
TUBA1B-201ENST00000332858 DIP2AQ14689 1571 aa16.58■□□□□ 0.25
TUBA1B-201ENST00000332858 HOXC9P31274 260 aa16.58■□□□□ 0.24
TUBA1B-201ENST00000332858 PIK3C2AO00443 1686 aa16.58■□□□□ 0.24
TUBA1B-201ENST00000332858 FLIIQ13045 1269 aa16.57■□□□□ 0.24
TUBA1B-201ENST00000332858 RRAGDQ9NQL2 400 aaPredicted RBP16.57■□□□□ 0.24
TUBA1B-201ENST00000332858 PNMA6EA0A0J9YXQ4 647 aa16.57■□□□□ 0.24
TUBA1B-201ENST00000332858 FKBP5Q13451 457 aaPredicted RBP16.57■□□□□ 0.24
TUBA1B-201ENST00000332858 FAM43AQ8N2R8 423 aa16.57■□□□□ 0.24
TUBA1B-201ENST00000332858 GAS2L3Q86XJ1 694 aa16.57■□□□□ 0.24
TUBA1B-201ENST00000332858 GNAT3A8MTJ3 354 aa16.56■□□□□ 0.24
TUBA1B-201ENST00000332858 CCT4P50991 539 aaKnown RBP16.56■□□□□ 0.24
TUBA1B-201ENST00000332858 PDE1AP54750 535 aa16.56■□□□□ 0.24
TUBA1B-201ENST00000332858 PKP1Q13835 747 aa16.56■□□□□ 0.24
TUBA1B-201ENST00000332858 RABEP1Q15276 862 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms