RNA–Protein interactions for RNA: ENST00000332687.10

RLIM-201, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RLIM, Length 8,317 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-201ENST00000332687 ARGLU1Q9NWB6 273 aaPredicted RBP5.87□□□□□ -1.47
RLIM-201ENST00000332687 SLC5A1P13866 664 aa5.87□□□□□ -1.47
RLIM-201ENST00000332687 IQCEQ6IPM2 695 aa5.87□□□□□ -1.47
RLIM-201ENST00000332687 UBAC1Q9BSL1 405 aa5.87□□□□□ -1.47
RLIM-201ENST00000332687 ZNF76P36508 570 aa5.87□□□□□ -1.47
RLIM-201ENST00000332687 CRACR2BQ8N4Y2 399 aaPredicted RBP5.87□□□□□ -1.47
RLIM-201ENST00000332687 TNPO1Q92973 898 aaKnown RBP5.87□□□□□ -1.47
RLIM-201ENST00000332687 GTPBP4Q9BZE4 634 aaKnown RBP5.87□□□□□ -1.47
RLIM-201ENST00000332687 SOS1Q07889 1333 aaPredicted RBP5.87□□□□□ -1.47
RLIM-201ENST00000332687 BIVM-ERCC5R4GMW8 1640 aa5.87□□□□□ -1.47
RLIM-201ENST00000332687 UHRF1BP1LA0JNW5 1464 aa5.87□□□□□ -1.47
RLIM-201ENST00000332687 NEBLO76041 1014 aa5.87□□□□□ -1.47
RLIM-201ENST00000332687 TEX35Q5T0J7 233 aa5.87□□□□□ -1.47
RLIM-201ENST00000332687 TTLL12Q14166 644 aaPredicted RBP5.86□□□□□ -1.47
RLIM-201ENST00000332687 BEGAINQ9BUH8 593 aa5.86□□□□□ -1.47
RLIM-201ENST00000332687 ZFYVE27Q5T4F4 411 aa5.86□□□□□ -1.47
RLIM-201ENST00000332687 USP37Q86T82 979 aa5.86□□□□□ -1.47
RLIM-201ENST00000332687 DDX54Q8TDD1 881 aaKnown RBP5.86□□□□□ -1.47
RLIM-201ENST00000332687 FAM13BQ9NYF5 915 aa5.86□□□□□ -1.47
RLIM-201ENST00000332687 AIMP1Q12904 312 aaKnown RBP5.86□□□□□ -1.47
RLIM-201ENST00000332687 CCDC112Q8NEF3 446 aa5.86□□□□□ -1.47
RLIM-201ENST00000332687 CABP5Q9NP86 173 aa5.86□□□□□ -1.47
RLIM-201ENST00000332687 KINO60870 393 aaKnown RBP5.86□□□□□ -1.47
RLIM-201ENST00000332687 MBD3O95983 291 aa5.86□□□□□ -1.47
RLIM-201ENST00000332687 EZRP15311 586 aaKnown RBP5.86□□□□□ -1.47
RLIM-201ENST00000332687 LMOD1P29536 600 aaPredicted RBP5.86□□□□□ -1.47
RLIM-201ENST00000332687 PDE3AQ14432 1141 aa5.86□□□□□ -1.47
RLIM-201ENST00000332687 RAPGEF6Q8TEU7 1601 aa5.86□□□□□ -1.47
RLIM-201ENST00000332687 PDCL3Q9H2J4 239 aa5.86□□□□□ -1.47
RLIM-201ENST00000332687 PHF8Q9UPP1 1060 aa5.86□□□□□ -1.47
RLIM-201ENST00000332687 PDE6BP35913 854 aa5.86□□□□□ -1.47
RLIM-201ENST00000332687 CABP2Q9NPB3 220 aa5.86□□□□□ -1.47
RLIM-201ENST00000332687 PTPN23Q9H3S7 1636 aa5.86□□□□□ -1.47
RLIM-201ENST00000332687 UBAP1LF5GYI3 381 aa5.86□□□□□ -1.47
RLIM-201ENST00000332687 MAP3K12Q12852 859 aa5.86□□□□□ -1.47
RLIM-201ENST00000332687 DDX46Q7L014 1031 aaKnown RBP5.86□□□□□ -1.47
RLIM-201ENST00000332687 DEF6Q9H4E7 631 aa5.86□□□□□ -1.47
RLIM-201ENST00000332687 PLCG2P16885 1265 aa5.85□□□□□ -1.47
RLIM-201ENST00000332687 NFE2L2Q16236 605 aa5.85□□□□□ -1.47
RLIM-201ENST00000332687 CAVIN1Q6NZI2 390 aaKnown RBP5.85□□□□□ -1.47
RLIM-201ENST00000332687 FLAD1Q8NFF5 587 aa5.85□□□□□ -1.47
RLIM-201ENST00000332687 ZSCAN31Q96LW9 406 aaPredicted RBP5.85□□□□□ -1.47
RLIM-201ENST00000332687 ABCC10Q5T3U5 1492 aa5.85□□□□□ -1.47
RLIM-201ENST00000332687 SPDYE4A6NLX3 237 aa5.85□□□□□ -1.47
RLIM-201ENST00000332687 HOOK3Q86VS8 718 aa5.85□□□□□ -1.47
RLIM-201ENST00000332687 OGFOD1Q8N543 542 aa5.85□□□□□ -1.47
RLIM-201ENST00000332687 SLKQ9H2G2 1235 aaPredicted RBP5.85□□□□□ -1.47
RLIM-201ENST00000332687 TNNI2P48788 182 aa5.85□□□□□ -1.47
RLIM-201ENST00000332687 CETN1Q12798 172 aa5.85□□□□□ -1.47
RLIM-201ENST00000332687 LRRC59Q96AG4 307 aaKnown RBP5.85□□□□□ -1.47
RLIM-201ENST00000332687 IPO9Q96P70 1041 aaKnown RBP5.85□□□□□ -1.47
RLIM-201ENST00000332687 EYA3Q99504 573 aa5.85□□□□□ -1.47
RLIM-201ENST00000332687 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.85□□□□□ -1.47
RLIM-201ENST00000332687 LRP2BPQ9P2M1 347 aa5.85□□□□□ -1.47
RLIM-201ENST00000332687 U3KPZ7 1027 aaPredicted RBP5.85□□□□□ -1.47
RLIM-201ENST00000332687 PPIP5K1Q6PFW1 1433 aa5.85□□□□□ -1.47
RLIM-201ENST00000332687 DDX12PQ92771 950 aa5.85□□□□□ -1.47
RLIM-201ENST00000332687 FMNL2Q96PY5 1086 aa5.85□□□□□ -1.47
RLIM-201ENST00000332687 DHX29Q7Z478 1369 aaKnown RBP5.85□□□□□ -1.47
RLIM-201ENST00000332687 RFC4P35249 363 aa5.85□□□□□ -1.47
RLIM-201ENST00000332687 NCBP1Q09161 790 aaKnown RBP5.85□□□□□ -1.47
RLIM-201ENST00000332687 TRPM2O94759 1503 aa5.85□□□□□ -1.47
RLIM-201ENST00000332687 PRXQ9BXM0 1461 aa5.85□□□□□ -1.47
RLIM-201ENST00000332687 PLIN1O60240 522 aa5.85□□□□□ -1.47
RLIM-201ENST00000332687 SURF6O75683 361 aaKnown RBP5.85□□□□□ -1.47
RLIM-201ENST00000332687 CLUAP1Q96AJ1 413 aa5.85□□□□□ -1.47
RLIM-201ENST00000332687 NUDT16Q96DE0 195 aaKnown RBP5.85□□□□□ -1.47
RLIM-201ENST00000332687 UHRF1BP1Q6BDS2 1440 aa5.84□□□□□ -1.47
RLIM-201ENST00000332687 BAG4O95429 457 aaKnown RBP5.84□□□□□ -1.47
RLIM-201ENST00000332687 TDO2P48775 406 aa5.84□□□□□ -1.47
RLIM-201ENST00000332687 IQCA1Q86XH1 822 aa5.84□□□□□ -1.47
RLIM-201ENST00000332687 DZIP1Q86YF9 867 aaKnown RBP5.84□□□□□ -1.47
RLIM-201ENST00000332687 FYB1O15117 783 aa5.84□□□□□ -1.47
RLIM-201ENST00000332687 KIF5BP33176 963 aa5.84□□□□□ -1.47
RLIM-201ENST00000332687 TMEM266Q2M3C6 531 aa5.84□□□□□ -1.47
RLIM-201ENST00000332687 CFAP45Q9UL16 551 aa5.84□□□□□ -1.47
RLIM-201ENST00000332687 CBFA2T2O43439 604 aa5.84□□□□□ -1.47
RLIM-201ENST00000332687 NAP1L1P55209 391 aaKnown RBP5.84□□□□□ -1.47
RLIM-201ENST00000332687 PAXIP1Q6ZW49 1069 aaPredicted RBP5.84□□□□□ -1.47
RLIM-201ENST00000332687 PUS7Q96PZ0 661 aaKnown RBP5.84□□□□□ -1.47
RLIM-201ENST00000332687 PRKRIP1Q9H875 184 aaPredicted RBP5.84□□□□□ -1.47
RLIM-201ENST00000332687 ANKIB1Q9P2G1 1089 aa5.84□□□□□ -1.47
RLIM-201ENST00000332687 APAF1O14727 1248 aa5.84□□□□□ -1.47
RLIM-201ENST00000332687 CASTP20810 708 aaKnown RBP5.84□□□□□ -1.47
RLIM-201ENST00000332687 ATP2B2Q01814 1243 aa5.84□□□□□ -1.47
RLIM-201ENST00000332687 IMMTQ16891 758 aaKnown RBP5.84□□□□□ -1.47
RLIM-201ENST00000332687 BCL11BQ9C0K0 894 aaPredicted RBP5.84□□□□□ -1.47
RLIM-201ENST00000332687 CAMSAP2Q08AD1 1489 aa5.84□□□□□ -1.47
RLIM-201ENST00000332687 TWISTNBQ3B726 338 aaPredicted RBP5.84□□□□□ -1.47
RLIM-201ENST00000332687 VPS36Q86VN1 386 aa5.84□□□□□ -1.47
RLIM-201ENST00000332687 WDR7Q9Y4E6 1490 aa5.84□□□□□ -1.48
RLIM-201ENST00000332687 RRP1P56182 461 aaKnown RBP5.84□□□□□ -1.48
RLIM-201ENST00000332687 BRDTQ58F21 947 aaPredicted RBP5.84□□□□□ -1.48
RLIM-201ENST00000332687 FMNL3Q8IVF7 1028 aa5.84□□□□□ -1.48
RLIM-201ENST00000332687 IFNL2Q8IZJ0 200 aa5.84□□□□□ -1.48
RLIM-201ENST00000332687 IFIT5Q13325 482 aaKnown RBP5.84□□□□□ -1.48
RLIM-201ENST00000332687 PNMA2Q9UL42 364 aa5.84□□□□□ -1.48
RLIM-201ENST00000332687 USP5P45974 858 aa5.83□□□□□ -1.48
RLIM-201ENST00000332687 MAP3K9P80192 1104 aa5.83□□□□□ -1.48
RLIM-201ENST00000332687 SUPT20HQ8NEM7 779 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms