RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 TBC1D2Q9BYX2 928 aa21.12■□□□□ 0.97
PRKCD-201ENST00000330452 IPO8O15397 1037 aaKnown RBP21.12■□□□□ 0.97
PRKCD-201ENST00000330452 FAM135BQ49AJ0 1406 aa21.12■□□□□ 0.97
PRKCD-201ENST00000330452 SETD1AO15047 1707 aaKnown RBP21.11■□□□□ 0.97
PRKCD-201ENST00000330452 MFAP1P55081 439 aaKnown RBP21.11■□□□□ 0.97
PRKCD-201ENST00000330452 XPCQ01831 940 aaPredicted RBP21.11■□□□□ 0.97
PRKCD-201ENST00000330452 SMC5Q8IY18 1101 aa21.11■□□□□ 0.97
PRKCD-201ENST00000330452 AMOTL2Q9Y2J4 779 aa21.11■□□□□ 0.97
PRKCD-201ENST00000330452 ADAMTS13Q76LX8 1427 aa21.11■□□□□ 0.97
PRKCD-201ENST00000330452 HDGFP51858 240 aaKnown RBP21.1■□□□□ 0.97
PRKCD-201ENST00000330452 ALDH1L2Q3SY69 923 aa21.1■□□□□ 0.97
PRKCD-201ENST00000330452 EID1Q9Y6B2 187 aa21.1■□□□□ 0.97
PRKCD-201ENST00000330452 NFE2L2Q16236 605 aa21.1■□□□□ 0.97
PRKCD-201ENST00000330452 SASS6Q6UVJ0 657 aa21.1■□□□□ 0.97
PRKCD-201ENST00000330452 ELL2O00472 640 aaPredicted RBP21.09■□□□□ 0.97
PRKCD-201ENST00000330452 SLC20A2Q08357 652 aa21.09■□□□□ 0.97
PRKCD-201ENST00000330452 TSPYL6Q8N831 410 aa21.09■□□□□ 0.97
PRKCD-201ENST00000330452 UBR1Q8IWV7 1749 aa21.09■□□□□ 0.97
PRKCD-201ENST00000330452 ATP7BP35670 1465 aa21.09■□□□□ 0.97
PRKCD-201ENST00000330452 SPRYD3Q8NCJ5 442 aa21.09■□□□□ 0.97
PRKCD-201ENST00000330452 CERS3Q8IU89 383 aa21.08■□□□□ 0.97
PRKCD-201ENST00000330452 ATP2B3Q16720 1220 aa21.08■□□□□ 0.96
PRKCD-201ENST00000330452 CCDC61Q9Y6R9 512 aa21.08■□□□□ 0.96
PRKCD-201ENST00000330452 DLC1Q96QB1 1528 aa21.07■□□□□ 0.96
PRKCD-201ENST00000330452 DDX11L8A8MPP1 907 aa21.07■□□□□ 0.96
PRKCD-201ENST00000330452 IL13P35225 146 aa21.07■□□□□ 0.96
PRKCD-201ENST00000330452 PTPRUQ92729 1446 aa21.07■□□□□ 0.96
PRKCD-201ENST00000330452 CDC42BPGQ6DT37 1551 aa21.07■□□□□ 0.96
PRKCD-201ENST00000330452 C22orf23Q9BZE7 217 aa21.07■□□□□ 0.96
PRKCD-201ENST00000330452 MAP2P11137 1827 aaKnown RBP21.07■□□□□ 0.96
PRKCD-201ENST00000330452 VAMP4O75379 141 aa21.06■□□□□ 0.96
PRKCD-201ENST00000330452 LNPKQ9C0E8 428 aa21.06■□□□□ 0.96
PRKCD-201ENST00000330452 NUTM2GQ5VZR2 741 aa21.06■□□□□ 0.96
PRKCD-201ENST00000330452 BCCIPQ9P287 314 aaKnown RBP eCLIP21.05■□□□□ 0.96
PRKCD-201ENST00000330452 NOL7Q9UMY1 257 aaKnown RBP21.05■□□□□ 0.96
PRKCD-201ENST00000330452 C1orf115Q9H7X2 142 aa21.04■□□□□ 0.96
PRKCD-201ENST00000330452 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.04■□□□□ 0.96
PRKCD-201ENST00000330452 CHMP5Q9NZZ3 219 aa21.04■□□□□ 0.96
PRKCD-201ENST00000330452 CPSF1Q10570 1443 aaKnown RBP21.04■□□□□ 0.96
PRKCD-201ENST00000330452 MRPL50Q8N5N7 158 aaKnown RBP21.04■□□□□ 0.96
PRKCD-201ENST00000330452 MBIPQ9NS73 344 aa21.04■□□□□ 0.96
PRKCD-201ENST00000330452 NASPP49321 788 aaPredicted RBP21.03■□□□□ 0.96
PRKCD-201ENST00000330452 NUCB1Q02818 461 aa21.03■□□□□ 0.96
PRKCD-201ENST00000330452 CSPP1Q1MSJ5 1256 aa21.03■□□□□ 0.96
PRKCD-201ENST00000330452 EDC4Q6P2E9 1401 aaKnown RBP21.03■□□□□ 0.96
PRKCD-201ENST00000330452 C3P01024 1663 aa21.03■□□□□ 0.96
PRKCD-201ENST00000330452 HS1BP3Q53T59 392 aa21.03■□□□□ 0.96
PRKCD-201ENST00000330452 DNAJC2Q99543 621 aaKnown RBP21.03■□□□□ 0.96
PRKCD-201ENST00000330452 KCNG1Q9UIX4 513 aa21.03■□□□□ 0.96
PRKCD-201ENST00000330452 CPS1P31327 1500 aa21.02■□□□□ 0.96
PRKCD-201ENST00000330452 ACEP12821 1306 aa21.02■□□□□ 0.96
PRKCD-201ENST00000330452 FAM83GA6ND36 823 aa21.02■□□□□ 0.96
PRKCD-201ENST00000330452 KCNA6P17658 529 aa21.02■□□□□ 0.96
PRKCD-201ENST00000330452 ZNF710Q8N1W2 664 aa21.02■□□□□ 0.96
PRKCD-201ENST00000330452 ZBTB7BO15156 539 aaPredicted RBP21.01■□□□□ 0.95
PRKCD-201ENST00000330452 IGSF3O75054 1194 aa21.01■□□□□ 0.95
PRKCD-201ENST00000330452 BRPF1P55201 1214 aaPredicted RBP21.01■□□□□ 0.95
PRKCD-201ENST00000330452 GNAI1P63096 354 aa21.01■□□□□ 0.95
PRKCD-201ENST00000330452 COG3Q96JB2 828 aa21.01■□□□□ 0.95
PRKCD-201ENST00000330452 ZNF428Q96B54 188 aa21.01■□□□□ 0.95
PRKCD-201ENST00000330452 IFT57Q9NWB7 429 aa21.01■□□□□ 0.95
PRKCD-201ENST00000330452 KCNJ4P48050 445 aa21■□□□□ 0.95
PRKCD-201ENST00000330452 DCTN1Q14203 1278 aa21■□□□□ 0.95
PRKCD-201ENST00000330452 CHD1LQ86WJ1 897 aa21■□□□□ 0.95
PRKCD-201ENST00000330452 ZNF853P0CG23 659 aa21■□□□□ 0.95
PRKCD-201ENST00000330452 MMP14P50281 582 aa21■□□□□ 0.95
PRKCD-201ENST00000330452 THEMISQ8N1K5 641 aaPredicted RBP20.99■□□□□ 0.95
PRKCD-201ENST00000330452 FER1L4A9Z1Z3 1794 aa20.99■□□□□ 0.95
PRKCD-201ENST00000330452 C8orf58Q8NAV2 365 aa20.99■□□□□ 0.95
PRKCD-201ENST00000330452 HAP1P54257 671 aaPredicted RBP20.98■□□□□ 0.95
PRKCD-201ENST00000330452 TWISTNBQ3B726 338 aaPredicted RBP20.98■□□□□ 0.95
PRKCD-201ENST00000330452 AEBP1Q8IUX7 1158 aa20.98■□□□□ 0.95
PRKCD-201ENST00000330452 PLEKHG1Q9ULL1 1385 aa20.98■□□□□ 0.95
PRKCD-201ENST00000330452 ANKRD45Q5TZF3 282 aa20.98■□□□□ 0.95
PRKCD-201ENST00000330452 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.97■□□□□ 0.95
PRKCD-201ENST00000330452 CDK12Q9NYV4 1490 aaPredicted RBP20.97■□□□□ 0.95
PRKCD-201ENST00000330452 AATKQ6ZMQ8 1374 aa20.96■□□□□ 0.95
PRKCD-201ENST00000330452 JARID2Q92833 1246 aaPredicted RBP20.96■□□□□ 0.95
PRKCD-201ENST00000330452 ARHGAP45Q92619 1136 aa20.96■□□□□ 0.95
PRKCD-201ENST00000330452 ZNF771Q7L3S4 317 aaPredicted RBP20.95■□□□□ 0.94
PRKCD-201ENST00000330452 CFAP44Q96MT7 982 aa20.95■□□□□ 0.94
PRKCD-201ENST00000330452 SIRT2Q8IXJ6 389 aa20.95■□□□□ 0.94
PRKCD-201ENST00000330452 CNPY4Q8N129 248 aa20.95■□□□□ 0.94
PRKCD-201ENST00000330452 MYRIPQ8NFW9 859 aa20.95■□□□□ 0.94
PRKCD-201ENST00000330452 PTCH1Q13635 1447 aa20.94■□□□□ 0.94
PRKCD-201ENST00000330452 NGDNQ8NEJ9 315 aaKnown RBP20.93■□□□□ 0.94
PRKCD-201ENST00000330452 TSC1Q92574 1164 aa20.93■□□□□ 0.94
PRKCD-201ENST00000330452 SPDYE4A6NLX3 237 aa20.93■□□□□ 0.94
PRKCD-201ENST00000330452 C14orf37Q86TY3 774 aa20.93■□□□□ 0.94
PRKCD-201ENST00000330452 HDAC5Q9UQL6 1122 aa20.93■□□□□ 0.94
PRKCD-201ENST00000330452 ZKSCAN5Q9Y2L8 839 aa20.93■□□□□ 0.94
PRKCD-201ENST00000330452 ABCC4O15439 1325 aa20.93■□□□□ 0.94
PRKCD-201ENST00000330452 PIK3R4Q99570 1358 aa20.93■□□□□ 0.94
PRKCD-201ENST00000330452 LMOD3Q0VAK6 560 aa20.92■□□□□ 0.94
PRKCD-201ENST00000330452 HSP90AB2PQ58FF8 381 aa20.92■□□□□ 0.94
PRKCD-201ENST00000330452 PSEN1P49768 467 aa20.91■□□□□ 0.94
PRKCD-201ENST00000330452 TTC21BQ7Z4L5 1316 aa20.91■□□□□ 0.94
PRKCD-201ENST00000330452 GCC1Q96CN9 775 aa20.91■□□□□ 0.94
PRKCD-201ENST00000330452 TECPR2O15040 1411 aa20.91■□□□□ 0.94
PRKCD-201ENST00000330452 KRT24Q2M2I5 525 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms