RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 IGHMBP2P38935 993 aaKnown RBP18.15■□□□□ 0.5
PTPN21-201ENST00000328736 KRT32Q14532 448 aa18.15■□□□□ 0.5
PTPN21-201ENST00000328736 RAI14Q9P0K7 980 aa18.15■□□□□ 0.5
PTPN21-201ENST00000328736 SYNJ2O15056 1496 aa18.15■□□□□ 0.5
PTPN21-201ENST00000328736 MYL6BP14649 208 aa18.15■□□□□ 0.5
PTPN21-201ENST00000328736 FKBP4Q02790 459 aaKnown RBP eCLIP18.15■□□□□ 0.5
PTPN21-201ENST00000328736 CEP131Q9UPN4 1083 aa18.15■□□□□ 0.5
PTPN21-201ENST00000328736 TNIP1Q15025 636 aa18.15■□□□□ 0.5
PTPN21-201ENST00000328736 SSBP05455 408 aaKnown RBP eCLIP18.15■□□□□ 0.5
PTPN21-201ENST00000328736 SPC24Q8NBT2 197 aa18.15■□□□□ 0.5
PTPN21-201ENST00000328736 KIAA1107Q9UPP5 1409 aa18.14■□□□□ 0.49
PTPN21-201ENST00000328736 AACSQ86V21 672 aa18.14■□□□□ 0.49
PTPN21-201ENST00000328736 ZNF287Q9HBT7 754 aa18.14■□□□□ 0.49
PTPN21-201ENST00000328736 CFAP45Q9UL16 551 aa18.14■□□□□ 0.49
PTPN21-201ENST00000328736 LARP1BQ659C4 914 aaKnown RBP18.14■□□□□ 0.49
PTPN21-201ENST00000328736 SKAP1Q86WV1 359 aa18.14■□□□□ 0.49
PTPN21-201ENST00000328736 PDIA4P13667 645 aaKnown RBP18.14■□□□□ 0.49
PTPN21-201ENST00000328736 BLOC1S2Q6QNY1 142 aa18.14■□□□□ 0.49
PTPN21-201ENST00000328736 EHBP1L1Q8N3D4 1523 aa18.13■□□□□ 0.49
PTPN21-201ENST00000328736 CEP126Q9P2H0 1117 aa18.13■□□□□ 0.49
PTPN21-201ENST00000328736 ERBINQ96RT1 1412 aa18.13■□□□□ 0.49
PTPN21-201ENST00000328736 MPNDQ8N594 471 aa18.13■□□□□ 0.49
PTPN21-201ENST00000328736 BRPF3Q9ULD4 1205 aa18.13■□□□□ 0.49
PTPN21-201ENST00000328736 XPCQ01831 940 aaPredicted RBP18.13■□□□□ 0.49
PTPN21-201ENST00000328736 PDRG1Q9NUG6 133 aa18.12■□□□□ 0.49
PTPN21-201ENST00000328736 ERICH3Q5RHP9 1530 aa18.12■□□□□ 0.49
PTPN21-201ENST00000328736 PPP1R12BO60237 982 aaPredicted RBP18.12■□□□□ 0.49
PTPN21-201ENST00000328736 TAF4BQ92750 862 aa18.12■□□□□ 0.49
PTPN21-201ENST00000328736 SMTNL1A8MU46 457 aa18.12■□□□□ 0.49
PTPN21-201ENST00000328736 PLCD4Q9BRC7 762 aa18.12■□□□□ 0.49
PTPN21-201ENST00000328736 LRP2BPQ9P2M1 347 aa18.12■□□□□ 0.49
PTPN21-201ENST00000328736 BTBD11A6QL63 1104 aa18.11■□□□□ 0.49
PTPN21-201ENST00000328736 CETN2P41208 172 aa18.11■□□□□ 0.49
PTPN21-201ENST00000328736 TAX1BP1Q86VP1 789 aa18.11■□□□□ 0.49
PTPN21-201ENST00000328736 K7ELQ4 463 aaPredicted RBP18.11■□□□□ 0.49
PTPN21-201ENST00000328736 WDHD1O75717 1129 aaPredicted RBP18.11■□□□□ 0.49
PTPN21-201ENST00000328736 WDR63Q8IWG1 891 aa18.11■□□□□ 0.49
PTPN21-201ENST00000328736 SPATA32Q96LK8 384 aa18.11■□□□□ 0.49
PTPN21-201ENST00000328736 HFM1A2PYH4 1435 aa18.11■□□□□ 0.49
PTPN21-201ENST00000328736 RTEL1-TNFRSF6BF6WH68 1400 aa18.11■□□□□ 0.49
PTPN21-201ENST00000328736 CDK13Q14004 1512 aaKnown RBP18.11■□□□□ 0.49
PTPN21-201ENST00000328736 CCDC112Q8NEF3 446 aa18.11■□□□□ 0.49
PTPN21-201ENST00000328736 MIS18AQ9NYP9 233 aa18.1■□□□□ 0.49
PTPN21-201ENST00000328736 PPP6R1Q9UPN7 881 aa18.1■□□□□ 0.49
PTPN21-201ENST00000328736 PPP4R3AQ6IN85 833 aa18.1■□□□□ 0.49
PTPN21-201ENST00000328736 ZNF397Q8NF99 534 aaPredicted RBP18.1■□□□□ 0.49
PTPN21-201ENST00000328736 IMMTQ16891 758 aaKnown RBP18.1■□□□□ 0.49
PTPN21-201ENST00000328736 CCDC97Q96F63 343 aaPredicted RBP18.1■□□□□ 0.49
PTPN21-201ENST00000328736 PLEKHH2Q8IVE3 1493 aa18.09■□□□□ 0.49
PTPN21-201ENST00000328736 ZNF652Q9Y2D9 606 aa18.09■□□□□ 0.49
PTPN21-201ENST00000328736 RAPGEF3O95398 923 aa18.09■□□□□ 0.49
PTPN21-201ENST00000328736 PRDM11Q9NQV5 511 aa18.09■□□□□ 0.49
PTPN21-201ENST00000328736 SEC63Q9UGP8 760 aaKnown RBP18.09■□□□□ 0.49
PTPN21-201ENST00000328736 DAPK1P53355 1430 aa18.09■□□□□ 0.49
PTPN21-201ENST00000328736 SPINK5Q9NQ38 1064 aaPredicted RBP18.09■□□□□ 0.49
PTPN21-201ENST00000328736 STARD3NLO95772 234 aa18.08■□□□□ 0.49
PTPN21-201ENST00000328736 USP5P45974 858 aa18.08■□□□□ 0.49
PTPN21-201ENST00000328736 ANKLE2Q86XL3 938 aa18.08■□□□□ 0.49
PTPN21-201ENST00000328736 AIDAQ96BJ3 306 aa18.08■□□□□ 0.49
PTPN21-201ENST00000328736 TIAM1Q13009 1591 aa18.08■□□□□ 0.48
PTPN21-201ENST00000328736 EIF5P55010 431 aaKnown RBP18.08■□□□□ 0.48
PTPN21-201ENST00000328736 KIAA1328Q86T90 577 aa18.08■□□□□ 0.48
PTPN21-201ENST00000328736 CENPHQ9H3R5 247 aa18.08■□□□□ 0.48
PTPN21-201ENST00000328736 NCAPD3P42695 1498 aa18.07■□□□□ 0.48
PTPN21-201ENST00000328736 SSR1P43307 286 aaKnown RBP18.07■□□□□ 0.48
PTPN21-201ENST00000328736 SRGAP3O43295 1099 aa18.07■□□□□ 0.48
PTPN21-201ENST00000328736 SNAPC4Q5SXM2 1469 aa18.07■□□□□ 0.48
PTPN21-201ENST00000328736 CCDC91Q7Z6B0 441 aa18.07■□□□□ 0.48
PTPN21-201ENST00000328736 JAKMIP1Q96N16 626 aaKnown RBP18.07■□□□□ 0.48
PTPN21-201ENST00000328736 SLC26A8Q96RN1 970 aa18.07■□□□□ 0.48
PTPN21-201ENST00000328736 AKAP2Q9Y2D5 859 aa18.07■□□□□ 0.48
PTPN21-201ENST00000328736 HECW1Q76N89 1606 aa18.06■□□□□ 0.48
PTPN21-201ENST00000328736 EPB41L2O43491 1005 aaKnown RBP18.06■□□□□ 0.48
PTPN21-201ENST00000328736 POGZQ7Z3K3 1410 aa18.06■□□□□ 0.48
PTPN21-201ENST00000328736 CCDC148Q8NFR7 591 aa18.06■□□□□ 0.48
PTPN21-201ENST00000328736 UPF3BQ9BZI7 483 aaKnown RBP18.06■□□□□ 0.48
PTPN21-201ENST00000328736 NUP62CLQ9H1M0 184 aa18.06■□□□□ 0.48
PTPN21-201ENST00000328736 THUMPD2Q9BTF0 503 aaKnown RBP18.06■□□□□ 0.48
PTPN21-201ENST00000328736 INCENPQ9NQS7 918 aa18.06■□□□□ 0.48
PTPN21-201ENST00000328736 CHD1LQ86WJ1 897 aa18.05■□□□□ 0.48
PTPN21-201ENST00000328736 TSG101Q99816 390 aa18.05■□□□□ 0.48
PTPN21-201ENST00000328736 SUPT6HQ7KZ85 1726 aaKnown RBP18.05■□□□□ 0.48
PTPN21-201ENST00000328736 ATF7IPQ6VMQ6 1270 aa18.05■□□□□ 0.48
PTPN21-201ENST00000328736 BICDL1Q6ZP65 573 aa18.05■□□□□ 0.48
PTPN21-201ENST00000328736 SLC52A1Q9NWF4 448 aa18.05■□□□□ 0.48
PTPN21-201ENST00000328736 SCLT1Q96NL6 688 aa18.04■□□□□ 0.48
PTPN21-201ENST00000328736 LRRFIP2Q9Y608 721 aaKnown RBP18.04■□□□□ 0.48
PTPN21-201ENST00000328736 CAVIN4Q5BKX8 364 aa18.04■□□□□ 0.48
PTPN21-201ENST00000328736 IDH1O75874 414 aaKnown RBP18.04■□□□□ 0.48
PTPN21-201ENST00000328736 MVPQ14764 893 aaKnown RBP18.04■□□□□ 0.48
PTPN21-201ENST00000328736 HSP90AB3PQ58FF7 597 aa18.04■□□□□ 0.48
PTPN21-201ENST00000328736 CRACR2BQ8N4Y2 399 aaPredicted RBP18.04■□□□□ 0.48
PTPN21-201ENST00000328736 CWC27Q6UX04 472 aaKnown RBP18.03■□□□□ 0.48
PTPN21-201ENST00000328736 IL1RAPL2Q9NP60 686 aa18.03■□□□□ 0.48
PTPN21-201ENST00000328736 ATAD2Q6PL18 1390 aa18.03■□□□□ 0.48
PTPN21-201ENST00000328736 POLR3DP05423 398 aaPredicted RBP18.03■□□□□ 0.48
PTPN21-201ENST00000328736 FAM177A1Q8N128 213 aaPredicted RBP18.03■□□□□ 0.48
PTPN21-201ENST00000328736 CCDC85AQ96PX6 553 aaPredicted RBP18.03■□□□□ 0.48
PTPN21-201ENST00000328736 IL27Q8NEV9 243 aa18.03■□□□□ 0.48
PTPN21-201ENST00000328736 EHMT1Q9H9B1 1298 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms