RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 LTN1O94822 1766 aa23.22■■□□□ 1.31
SHISA3-201ENST00000319234 RGS3P49796 1198 aa23.22■■□□□ 1.31
SHISA3-201ENST00000319234 MCM10Q7L590 875 aa23.22■■□□□ 1.31
SHISA3-201ENST00000319234 TSPYL6Q8N831 410 aa23.22■■□□□ 1.31
SHISA3-201ENST00000319234 MST1RQ04912 1400 aa23.22■■□□□ 1.31
SHISA3-201ENST00000319234 IGHDP01880 384 aa23.21■■□□□ 1.31
SHISA3-201ENST00000319234 LTV1Q96GA3 475 aaPredicted RBP23.21■■□□□ 1.31
SHISA3-201ENST00000319234 TRPM3Q9HCF6 1732 aaPredicted RBP23.21■■□□□ 1.31
SHISA3-201ENST00000319234 CHL1O00533 1208 aa23.21■■□□□ 1.31
SHISA3-201ENST00000319234 TWISTNBQ3B726 338 aaPredicted RBP23.21■■□□□ 1.31
SHISA3-201ENST00000319234 SLIT3O75094 1523 aa23.2■■□□□ 1.31
SHISA3-201ENST00000319234 GCP02774 474 aa23.2■■□□□ 1.3
SHISA3-201ENST00000319234 MRPL50Q8N5N7 158 aaKnown RBP23.2■■□□□ 1.3
SHISA3-201ENST00000319234 C8orf58Q8NAV2 365 aa23.2■■□□□ 1.3
SHISA3-201ENST00000319234 RTF1Q92541 710 aaKnown RBP23.2■■□□□ 1.3
SHISA3-201ENST00000319234 CRB1P82279 1406 aa23.19■■□□□ 1.3
SHISA3-201ENST00000319234 HTATSF1O43719 755 aaKnown RBP23.19■■□□□ 1.3
SHISA3-201ENST00000319234 PHRF1Q9P1Y6 1649 aaKnown RBP23.19■■□□□ 1.3
SHISA3-201ENST00000319234 USP19O94966 1318 aa23.18■■□□□ 1.3
SHISA3-201ENST00000319234 CADPS2Q86UW7 1296 aa23.18■■□□□ 1.3
SHISA3-201ENST00000319234 DAXXQ9UER7 740 aaPredicted RBP23.18■■□□□ 1.3
SHISA3-201ENST00000319234 LMTK3Q96Q04 1460 aa23.18■■□□□ 1.3
SHISA3-201ENST00000319234 ELL2O00472 640 aaPredicted RBP23.17■■□□□ 1.3
SHISA3-201ENST00000319234 LMOD2Q6P5Q4 547 aa23.17■■□□□ 1.3
SHISA3-201ENST00000319234 ARHGEF25Q86VW2 580 aa23.17■■□□□ 1.3
SHISA3-201ENST00000319234 ARHGAP45Q92619 1136 aa23.17■■□□□ 1.3
SHISA3-201ENST00000319234 DDX19BQ9UMR2 479 aa23.17■■□□□ 1.3
SHISA3-201ENST00000319234 PCDHB15Q9Y5E8 787 aa23.16■■□□□ 1.3
SHISA3-201ENST00000319234 HAP1P54257 671 aaPredicted RBP23.15■■□□□ 1.3
SHISA3-201ENST00000319234 KIAA0232Q92628 1395 aa23.15■■□□□ 1.3
SHISA3-201ENST00000319234 ZBTB7CA1YPR0 619 aa23.14■■□□□ 1.3
SHISA3-201ENST00000319234 ITPRIPQ8IWB1 547 aa23.14■■□□□ 1.29
SHISA3-201ENST00000319234 TMEM57Q8N5G2 664 aa23.14■■□□□ 1.29
SHISA3-201ENST00000319234 MSH6P52701 1360 aa23.14■■□□□ 1.29
SHISA3-201ENST00000319234 GNAT3A8MTJ3 354 aa23.13■■□□□ 1.29
SHISA3-201ENST00000319234 NBPF6Q5VWK0 638 aa23.12■■□□□ 1.29
SHISA3-201ENST00000319234 USHBP1Q8N6Y0 703 aa23.12■■□□□ 1.29
SHISA3-201ENST00000319234 NBPF4Q96M43 638 aa23.12■■□□□ 1.29
SHISA3-201ENST00000319234 RWDD1Q9H446 243 aaPredicted RBP23.11■■□□□ 1.29
SHISA3-201ENST00000319234 STRCQ7RTU9 1775 aa23.11■■□□□ 1.29
SHISA3-201ENST00000319234 ALS2Q96Q42 1657 aa23.11■■□□□ 1.29
SHISA3-201ENST00000319234 MAP3K5Q99683 1374 aa23.09■■□□□ 1.29
SHISA3-201ENST00000319234 NPHP3Q7Z494 1330 aa23.09■■□□□ 1.29
SHISA3-201ENST00000319234 TSPYL4Q9UJ04 414 aa23.09■■□□□ 1.29
SHISA3-201ENST00000319234 PLEKHG5O94827 1062 aa23.08■■□□□ 1.29
SHISA3-201ENST00000319234 KRT24Q2M2I5 525 aa23.07■■□□□ 1.28
SHISA3-201ENST00000319234 API5Q9BZZ5 524 aaKnown RBP23.07■■□□□ 1.28
SHISA3-201ENST00000319234 ZBTB40Q9NUA8 1239 aa23.07■■□□□ 1.28
SHISA3-201ENST00000319234 MIS18AQ9NYP9 233 aa23.07■■□□□ 1.28
SHISA3-201ENST00000319234 LRRC37A3O60309 1634 aa23.06■■□□□ 1.28
SHISA3-201ENST00000319234 DDX17Q92841 729 aaKnown RBP23.06■■□□□ 1.28
SHISA3-201ENST00000319234 IL17REQ8NFR9 667 aa23.05■■□□□ 1.28
SHISA3-201ENST00000319234 ANKRD24Q8TF21 1146 aa23.05■■□□□ 1.28
SHISA3-201ENST00000319234 LRRC59Q96AG4 307 aaKnown RBP23.05■■□□□ 1.28
SHISA3-201ENST00000319234 CHMP4BQ9H444 224 aaKnown RBP23.05■■□□□ 1.28
SHISA3-201ENST00000319234 MED1Q15648 1581 aaPredicted RBP23.05■■□□□ 1.28
SHISA3-201ENST00000319234 ABCC4O15439 1325 aa23.05■■□□□ 1.28
SHISA3-201ENST00000319234 NCAPD2Q15021 1401 aa23.05■■□□□ 1.28
SHISA3-201ENST00000319234 BABAM1Q9NWV8 329 aa23.05■■□□□ 1.28
SHISA3-201ENST00000319234 XIRP1Q702N8 1843 aaKnown RBP23.04■■□□□ 1.28
SHISA3-201ENST00000319234 HDAC1Q13547 482 aaPredicted RBP23.03■■□□□ 1.28
SHISA3-201ENST00000319234 AXIN2Q9Y2T1 843 aa23.03■■□□□ 1.28
SHISA3-201ENST00000319234 TNS3Q68CZ2 1445 aa23.02■■□□□ 1.28
SHISA3-201ENST00000319234 TAF7Q15545 349 aaPredicted RBP23.01■■□□□ 1.27
SHISA3-201ENST00000319234 PXDNQ92626 1479 aa23.01■■□□□ 1.27
SHISA3-201ENST00000319234 RGPD2P0DJD1 1756 aa23.01■■□□□ 1.27
SHISA3-201ENST00000319234 SLC4A3P48751 1232 aa23.01■■□□□ 1.27
SHISA3-201ENST00000319234 NFKBIBQ15653 356 aa23.01■■□□□ 1.27
SHISA3-201ENST00000319234 PLEKHO1Q53GL0 409 aaPredicted RBP23.01■■□□□ 1.27
SHISA3-201ENST00000319234 ZBTB7BO15156 539 aaPredicted RBP23■■□□□ 1.27
SHISA3-201ENST00000319234 ZC3H6P61129 1189 aaKnown RBP23■■□□□ 1.27
SHISA3-201ENST00000319234 AMOTQ4VCS5 1084 aa23■■□□□ 1.27
SHISA3-201ENST00000319234 PDZRN3Q9UPQ7 1066 aa23■■□□□ 1.27
SHISA3-201ENST00000319234 SPATA31A3Q5VYP0 1347 aa23■■□□□ 1.27
SHISA3-201ENST00000319234 ZNF335Q9H4Z2 1342 aaPredicted RBP23■■□□□ 1.27
SHISA3-201ENST00000319234 CAMTA1Q9Y6Y1 1673 aa22.98■■□□□ 1.27
SHISA3-201ENST00000319234 BRINP3Q76B58 766 aa22.98■■□□□ 1.27
SHISA3-201ENST00000319234 CEMIPQ8WUJ3 1361 aa22.98■■□□□ 1.27
SHISA3-201ENST00000319234 PTPRCP08575 1304 aa22.98■■□□□ 1.27
SHISA3-201ENST00000319234 AKAP4Q5JQC9 854 aa22.98■■□□□ 1.27
SHISA3-201ENST00000319234 SOS1Q07889 1333 aaPredicted RBP22.97■■□□□ 1.27
SHISA3-201ENST00000319234 ERBB3P21860 1342 aa22.97■■□□□ 1.27
SHISA3-201ENST00000319234 BECN1Q14457 450 aa22.96■■□□□ 1.27
SHISA3-201ENST00000319234 ZNF530Q6P9A1 599 aaPredicted RBP22.96■■□□□ 1.27
SHISA3-201ENST00000319234 UPF2Q9HAU5 1272 aaKnown RBP22.96■■□□□ 1.27
SHISA3-201ENST00000319234 SLC4A2P04920 1241 aa22.95■■□□□ 1.26
SHISA3-201ENST00000319234 INTS3Q68E01 1043 aaKnown RBP22.94■■□□□ 1.26
SHISA3-201ENST00000319234 SLAIN2Q9P270 581 aa22.94■■□□□ 1.26
SHISA3-201ENST00000319234 RGS12O14924 1447 aa22.94■■□□□ 1.26
SHISA3-201ENST00000319234 CABLES1Q8TDN4 633 aa22.93■■□□□ 1.26
SHISA3-201ENST00000319234 LMO7Q8WWI1 1683 aa22.93■■□□□ 1.26
SHISA3-201ENST00000319234 SEC24BO95487 1268 aa22.92■■□□□ 1.26
SHISA3-201ENST00000319234 SMC5Q8IY18 1101 aa22.92■■□□□ 1.26
SHISA3-201ENST00000319234 LGR6Q9HBX8 967 aa22.92■■□□□ 1.26
SHISA3-201ENST00000319234 RGPD5Q99666 1765 aa22.92■■□□□ 1.26
SHISA3-201ENST00000319234 ABCC6O95255 1503 aa22.91■■□□□ 1.26
SHISA3-201ENST00000319234 C1orf141Q5JVX7 400 aa22.91■■□□□ 1.26
SHISA3-201ENST00000319234 CCDC30Q5VVM6 783 aa22.91■■□□□ 1.26
SHISA3-201ENST00000319234 COL18A1P39060 1754 aa22.91■■□□□ 1.26
SHISA3-201ENST00000319234 STK31Q9BXU1 1019 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 792.4 ms