RNA–Protein interactions for RNA: ENST00000306071.6

CHRNB1-201, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB1, Length 2,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-201ENST00000306071 GNAI1P63096 354 aa22.92■■□□□ 1.26
CHRNB1-201ENST00000306071 FAM184AQ8NB25 1140 aa22.92■■□□□ 1.26
CHRNB1-201ENST00000306071 GDPD2Q9HCC8 539 aa22.91■■□□□ 1.26
CHRNB1-201ENST00000306071 UVSSAQ2YD98 709 aa22.91■■□□□ 1.26
CHRNB1-201ENST00000306071 ADCY5O95622 1261 aa22.9■■□□□ 1.26
CHRNB1-201ENST00000306071 NOL8Q76FK4 1167 aaKnown RBP22.9■■□□□ 1.26
CHRNB1-201ENST00000306071 MBIPQ9NS73 344 aa22.9■■□□□ 1.26
CHRNB1-201ENST00000306071 GADD45BO75293 160 aaPredicted RBP22.9■■□□□ 1.26
CHRNB1-201ENST00000306071 KIF20AO95235 890 aa22.9■■□□□ 1.26
CHRNB1-201ENST00000306071 LRRC7Q96NW7 1537 aa22.89■■□□□ 1.26
CHRNB1-201ENST00000306071 KNDC1Q76NI1 1749 aa22.89■■□□□ 1.26
CHRNB1-201ENST00000306071 BCL2L12Q9HB09 334 aa22.89■■□□□ 1.25
CHRNB1-201ENST00000306071 SPDYE4A6NLX3 237 aa22.88■■□□□ 1.25
CHRNB1-201ENST00000306071 LETM1O95202 739 aaPredicted RBP22.88■■□□□ 1.25
CHRNB1-201ENST00000306071 MCM2P49736 904 aa22.88■■□□□ 1.25
CHRNB1-201ENST00000306071 FKBP5Q13451 457 aaPredicted RBP22.88■■□□□ 1.25
CHRNB1-201ENST00000306071 NFE2L2Q16236 605 aa22.88■■□□□ 1.25
CHRNB1-201ENST00000306071 NUTM2DQ5VT03 806 aaPredicted RBP22.88■■□□□ 1.25
CHRNB1-201ENST00000306071 PDCL2Q8N4E4 241 aa22.88■■□□□ 1.25
CHRNB1-201ENST00000306071 IFT57Q9NWB7 429 aa22.88■■□□□ 1.25
CHRNB1-201ENST00000306071 MROH1Q8NDA8 1641 aa22.88■■□□□ 1.25
CHRNB1-201ENST00000306071 PPLO60437 1756 aa22.88■■□□□ 1.25
CHRNB1-201ENST00000306071 ANKRD44Q8N8A2 993 aa22.88■■□□□ 1.25
CHRNB1-201ENST00000306071 PHACTR3Q96KR7 559 aa22.88■■□□□ 1.25
CHRNB1-201ENST00000306071 FANCAO15360 1455 aa22.87■■□□□ 1.25
CHRNB1-201ENST00000306071 TERF2IPQ9NYB0 399 aa22.87■■□□□ 1.25
CHRNB1-201ENST00000306071 HMOX1P09601 288 aa22.87■■□□□ 1.25
CHRNB1-201ENST00000306071 USP48Q86UV5 1035 aa22.87■■□□□ 1.25
CHRNB1-201ENST00000306071 SPTLC3Q9NUV7 552 aa22.87■■□□□ 1.25
CHRNB1-201ENST00000306071 TPRNQ4KMQ1 711 aa22.86■■□□□ 1.25
CHRNB1-201ENST00000306071 C8orf58Q8NAV2 365 aa22.86■■□□□ 1.25
CHRNB1-201ENST00000306071 GLI2P10070 1586 aa22.86■■□□□ 1.25
CHRNB1-201ENST00000306071 FAM135BQ49AJ0 1406 aa22.85■■□□□ 1.25
CHRNB1-201ENST00000306071 PNPLA6Q8IY17 1366 aa22.85■■□□□ 1.25
CHRNB1-201ENST00000306071 PLCB2Q00722 1185 aa22.85■■□□□ 1.25
CHRNB1-201ENST00000306071 CHAF1AQ13111 956 aaPredicted RBP22.85■■□□□ 1.25
CHRNB1-201ENST00000306071 CUL4AQ13619 759 aa22.85■■□□□ 1.25
CHRNB1-201ENST00000306071 CFAP65Q6ZU64 1925 aaKnown RBP22.84■■□□□ 1.25
CHRNB1-201ENST00000306071 RPAP2Q8IXW5 612 aaPredicted RBP22.84■■□□□ 1.25
CHRNB1-201ENST00000306071 KIF24Q5T7B8 1368 aa22.84■■□□□ 1.25
CHRNB1-201ENST00000306071 HCLS1P14317 486 aaPredicted RBP22.83■■□□□ 1.25
CHRNB1-201ENST00000306071 CEP85Q6P2H3 762 aa22.83■■□□□ 1.25
CHRNB1-201ENST00000306071 ARHGEF28Q8N1W1 1705 aaKnown RBP22.83■■□□□ 1.25
CHRNB1-201ENST00000306071 INTS4Q96HW7 963 aaKnown RBP22.83■■□□□ 1.24
CHRNB1-201ENST00000306071 DIAPH3Q9NSV4 1193 aa22.83■■□□□ 1.24
CHRNB1-201ENST00000306071 FGD1P98174 961 aa22.82■■□□□ 1.24
CHRNB1-201ENST00000306071 ZCCHC11Q5TAX3 1644 aaKnown RBP22.82■■□□□ 1.24
CHRNB1-201ENST00000306071 CCDC183Q5T5S1 534 aa22.82■■□□□ 1.24
CHRNB1-201ENST00000306071 MCCP23508 829 aa22.81■■□□□ 1.24
CHRNB1-201ENST00000306071 STK26Q9P289 416 aa22.81■■□□□ 1.24
CHRNB1-201ENST00000306071 ATP10DQ9P241 1426 aa22.81■■□□□ 1.24
CHRNB1-201ENST00000306071 ZNF853P0CG23 659 aa22.81■■□□□ 1.24
CHRNB1-201ENST00000306071 RPGRIP1LQ68CZ1 1315 aa22.8■■□□□ 1.24
CHRNB1-201ENST00000306071 ANKRD26Q9UPS8 1709 aa22.8■■□□□ 1.24
CHRNB1-201ENST00000306071 RIOK3O14730 519 aaKnown RBP22.8■■□□□ 1.24
CHRNB1-201ENST00000306071 U2AF2P26368 475 aaKnown RBP eCLIP22.8■■□□□ 1.24
CHRNB1-201ENST00000306071 SENP3Q9H4L4 574 aaPredicted RBP22.8■■□□□ 1.24
CHRNB1-201ENST00000306071 WDR33Q9C0J8 1336 aaKnown RBP22.79■■□□□ 1.24
CHRNB1-201ENST00000306071 FBLN1P23142 703 aa22.79■■□□□ 1.24
CHRNB1-201ENST00000306071 KDM4AO75164 1064 aa22.79■■□□□ 1.24
CHRNB1-201ENST00000306071 PALD1Q9ULE6 856 aa22.78■■□□□ 1.24
CHRNB1-201ENST00000306071 YEATS2Q9ULM3 1422 aa22.78■■□□□ 1.24
CHRNB1-201ENST00000306071 ERCC6L2Q5T890 1561 aa22.78■■□□□ 1.24
CHRNB1-201ENST00000306071 IGSF3O75054 1194 aa22.77■■□□□ 1.24
CHRNB1-201ENST00000306071 MX1P20591 662 aa22.77■■□□□ 1.24
CHRNB1-201ENST00000306071 HDGFL2Q7Z4V5 671 aaPredicted RBP22.77■■□□□ 1.24
CHRNB1-201ENST00000306071 ZFYVE9O95405 1425 aa22.77■■□□□ 1.24
CHRNB1-201ENST00000306071 PDE1AP54750 535 aa22.76■■□□□ 1.23
CHRNB1-201ENST00000306071 KIAA1524Q8TCG1 905 aa22.76■■□□□ 1.23
CHRNB1-201ENST00000306071 ANO2Q9NQ90 1003 aa22.76■■□□□ 1.23
CHRNB1-201ENST00000306071 MINK1Q8N4C8 1332 aaPredicted RBP22.76■■□□□ 1.23
CHRNB1-201ENST00000306071 CDC42BPGQ6DT37 1551 aa22.76■■□□□ 1.23
CHRNB1-201ENST00000306071 TCHHQ07283 1943 aa22.75■■□□□ 1.23
CHRNB1-201ENST00000306071 VGFO15240 615 aaPredicted RBP22.75■■□□□ 1.23
CHRNB1-201ENST00000306071 ESYT1Q9BSJ8 1104 aa22.75■■□□□ 1.23
CHRNB1-201ENST00000306071 UPF3BQ9BZI7 483 aaKnown RBP22.75■■□□□ 1.23
CHRNB1-201ENST00000306071 CAMSAP1Q5T5Y3 1602 aa22.75■■□□□ 1.23
CHRNB1-201ENST00000306071 ANKRD7Q92527 254 aa22.75■■□□□ 1.23
CHRNB1-201ENST00000306071 PYCARDQ9ULZ3 195 aa22.75■■□□□ 1.23
CHRNB1-201ENST00000306071 CNPY2Q9Y2B0 182 aa22.75■■□□□ 1.23
CHRNB1-201ENST00000306071 SRCIN1Q9C0H9 1055 aa22.74■■□□□ 1.23
CHRNB1-201ENST00000306071 POLKQ9UBT6 870 aa22.74■■□□□ 1.23
CHRNB1-201ENST00000306071 RTL1A6NKG5 1358 aa22.74■■□□□ 1.23
CHRNB1-201ENST00000306071 ARAP3Q8WWN8 1544 aa22.74■■□□□ 1.23
CHRNB1-201ENST00000306071 MEIS3Q99687 375 aa22.74■■□□□ 1.23
CHRNB1-201ENST00000306071 ARHGEF40Q8TER5 1519 aa22.74■■□□□ 1.23
CHRNB1-201ENST00000306071 TSHZ3Q63HK5 1081 aa22.73■■□□□ 1.23
CHRNB1-201ENST00000306071 MSH6P52701 1360 aa22.73■■□□□ 1.23
CHRNB1-201ENST00000306071 FAM83GA6ND36 823 aa22.73■■□□□ 1.23
CHRNB1-201ENST00000306071 LMOD3Q0VAK6 560 aa22.73■■□□□ 1.23
CHRNB1-201ENST00000306071 KRT24Q2M2I5 525 aa22.73■■□□□ 1.23
CHRNB1-201ENST00000306071 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.73■■□□□ 1.23
CHRNB1-201ENST00000306071 SPC24Q8NBT2 197 aa22.73■■□□□ 1.23
CHRNB1-201ENST00000306071 KCNF1Q9H3M0 494 aa22.73■■□□□ 1.23
CHRNB1-201ENST00000306071 ANAPC15P60006 121 aa22.72■■□□□ 1.23
CHRNB1-201ENST00000306071 NPATQ14207 1427 aa22.72■■□□□ 1.23
CHRNB1-201ENST00000306071 HMMRO75330 724 aa22.72■■□□□ 1.23
CHRNB1-201ENST00000306071 ZNF771Q7L3S4 317 aaPredicted RBP22.72■■□□□ 1.23
CHRNB1-201ENST00000306071 OSBPL3Q9H4L5 887 aa22.72■■□□□ 1.23
CHRNB1-201ENST00000306071 TPM3P06753 285 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms