RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 COG3Q96JB2 828 aa19.35■□□□□ 0.69
UBAP1-201ENST00000297661 PODXL2Q9NZ53 605 aa19.35■□□□□ 0.69
UBAP1-201ENST00000297661 SIRT2Q8IXJ6 389 aa19.35■□□□□ 0.69
UBAP1-201ENST00000297661 NWD1Q149M9 1564 aa19.34■□□□□ 0.69
UBAP1-201ENST00000297661 CALD1Q05682 793 aaKnown RBP19.34■□□□□ 0.69
UBAP1-201ENST00000297661 XIRP1Q702N8 1843 aaKnown RBP19.34■□□□□ 0.69
UBAP1-201ENST00000297661 GNAI1P63096 354 aa19.34■□□□□ 0.69
UBAP1-201ENST00000297661 CERKQ8TCT0 537 aa19.33■□□□□ 0.69
UBAP1-201ENST00000297661 TECPR2O15040 1411 aa19.33■□□□□ 0.69
UBAP1-201ENST00000297661 ATP7BP35670 1465 aa19.33■□□□□ 0.69
UBAP1-201ENST00000297661 CPS1P31327 1500 aa19.33■□□□□ 0.68
UBAP1-201ENST00000297661 PTCH1Q13635 1447 aa19.33■□□□□ 0.68
UBAP1-201ENST00000297661 TNPO1Q92973 898 aaKnown RBP19.32■□□□□ 0.68
UBAP1-201ENST00000297661 IFT57Q9NWB7 429 aa19.32■□□□□ 0.68
UBAP1-201ENST00000297661 FOXD4L1Q9NU39 408 aa19.32■□□□□ 0.68
UBAP1-201ENST00000297661 DDX17Q92841 729 aaKnown RBP19.31■□□□□ 0.68
UBAP1-201ENST00000297661 C19orf44Q9H6X5 657 aa19.31■□□□□ 0.68
UBAP1-201ENST00000297661 EDC4Q6P2E9 1401 aaKnown RBP19.31■□□□□ 0.68
UBAP1-201ENST00000297661 NALCNQ8IZF0 1738 aa19.31■□□□□ 0.68
UBAP1-201ENST00000297661 ATF3P18847 181 aa19.31■□□□□ 0.68
UBAP1-201ENST00000297661 DDIT3P35638 169 aa19.31■□□□□ 0.68
UBAP1-201ENST00000297661 CPSF1Q10570 1443 aaKnown RBP19.31■□□□□ 0.68
UBAP1-201ENST00000297661 CDC42BPGQ6DT37 1551 aa19.31■□□□□ 0.68
UBAP1-201ENST00000297661 ZNF853P0CG23 659 aa19.31■□□□□ 0.68
UBAP1-201ENST00000297661 CCDC61Q9Y6R9 512 aa19.31■□□□□ 0.68
UBAP1-201ENST00000297661 PRR36Q9H6K5 1346 aa19.3■□□□□ 0.68
UBAP1-201ENST00000297661 NCOA3Q9Y6Q9 1424 aa19.3■□□□□ 0.68
UBAP1-201ENST00000297661 MSH6P52701 1360 aa19.29■□□□□ 0.68
UBAP1-201ENST00000297661 UBAP1LF5GYI3 381 aa19.29■□□□□ 0.68
UBAP1-201ENST00000297661 RBM10P98175 930 aaKnown RBP19.29■□□□□ 0.68
UBAP1-201ENST00000297661 CCDC173Q0VFZ6 552 aa19.29■□□□□ 0.68
UBAP1-201ENST00000297661 SULT6B1Q6IMI4 303 aa19.29■□□□□ 0.68
UBAP1-201ENST00000297661 ZSCAN30Q86W11 494 aa19.29■□□□□ 0.68
UBAP1-201ENST00000297661 CFAP44Q96MT7 982 aa19.29■□□□□ 0.68
UBAP1-201ENST00000297661 ORAI2Q96SN7 254 aa19.29■□□□□ 0.68
UBAP1-201ENST00000297661 PRDM4Q9UKN5 801 aa19.29■□□□□ 0.68
UBAP1-201ENST00000297661 KNDC1Q76NI1 1749 aa19.29■□□□□ 0.68
UBAP1-201ENST00000297661 OFD1O75665 1012 aa19.29■□□□□ 0.68
UBAP1-201ENST00000297661 MCM10Q7L590 875 aa19.29■□□□□ 0.68
UBAP1-201ENST00000297661 GBP4Q96PP9 640 aa19.29■□□□□ 0.68
UBAP1-201ENST00000297661 APBB1O00213 710 aa19.28■□□□□ 0.68
UBAP1-201ENST00000297661 PLEKHG5O94827 1062 aa19.28■□□□□ 0.68
UBAP1-201ENST00000297661 XPCQ01831 940 aaPredicted RBP19.28■□□□□ 0.68
UBAP1-201ENST00000297661 SKOR2Q2VWA4 1001 aaPredicted RBP19.28■□□□□ 0.68
UBAP1-201ENST00000297661 RBM42Q9BTD8 480 aaKnown RBP19.28■□□□□ 0.68
UBAP1-201ENST00000297661 ADGRL3Q9HAR2 1447 aa19.27■□□□□ 0.68
UBAP1-201ENST00000297661 DLC1Q96QB1 1528 aa19.27■□□□□ 0.68
UBAP1-201ENST00000297661 CD2BP2O95400 341 aaKnown RBP19.27■□□□□ 0.67
UBAP1-201ENST00000297661 BRPF1P55201 1214 aaPredicted RBP19.27■□□□□ 0.67
UBAP1-201ENST00000297661 ESCO1Q5FWF5 840 aa19.27■□□□□ 0.67
UBAP1-201ENST00000297661 PPP1R9BQ96SB3 815 aa19.27■□□□□ 0.67
UBAP1-201ENST00000297661 ABCC4O15439 1325 aa19.27■□□□□ 0.67
UBAP1-201ENST00000297661 TBC1D9Q6ZT07 1266 aa19.26■□□□□ 0.67
UBAP1-201ENST00000297661 ZNF428Q96B54 188 aa19.26■□□□□ 0.67
UBAP1-201ENST00000297661 BMP2KLQ5H9B9 411 aa19.26■□□□□ 0.67
UBAP1-201ENST00000297661 MIS18AQ9NYP9 233 aa19.26■□□□□ 0.67
UBAP1-201ENST00000297661 NASPP49321 788 aaPredicted RBP19.25■□□□□ 0.67
UBAP1-201ENST00000297661 EIF4A2Q14240 407 aaKnown RBP19.25■□□□□ 0.67
UBAP1-201ENST00000297661 ARHGAP45Q92619 1136 aa19.25■□□□□ 0.67
UBAP1-201ENST00000297661 GCC1Q96CN9 775 aa19.25■□□□□ 0.67
UBAP1-201ENST00000297661 SIRT1Q96EB6 747 aa19.25■□□□□ 0.67
UBAP1-201ENST00000297661 CDK12Q9NYV4 1490 aaPredicted RBP19.25■□□□□ 0.67
UBAP1-201ENST00000297661 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.25■□□□□ 0.67
UBAP1-201ENST00000297661 C16orf71Q8IYS4 520 aaPredicted RBP19.25■□□□□ 0.67
UBAP1-201ENST00000297661 MSNP26038 577 aaKnown RBP19.24■□□□□ 0.67
UBAP1-201ENST00000297661 RBM25P49756 843 aaKnown RBP19.24■□□□□ 0.67
UBAP1-201ENST00000297661 SLAIN2Q9P270 581 aa19.24■□□□□ 0.67
UBAP1-201ENST00000297661 RAB3GAP1Q15042 981 aa19.24■□□□□ 0.67
UBAP1-201ENST00000297661 HSP90AB2PQ58FF8 381 aa19.24■□□□□ 0.67
UBAP1-201ENST00000297661 CIZ1Q9ULV3 898 aaPredicted RBP19.24■□□□□ 0.67
UBAP1-201ENST00000297661 RGPD8O14715 1765 aaPredicted RBP19.24■□□□□ 0.67
UBAP1-201ENST00000297661 DLG5Q8TDM6 1919 aa19.24■□□□□ 0.67
UBAP1-201ENST00000297661 HSP90AB1P08238 724 aaKnown RBP19.23■□□□□ 0.67
UBAP1-201ENST00000297661 KIF2CQ99661 725 aa19.23■□□□□ 0.67
UBAP1-201ENST00000297661 LMOD3Q0VAK6 560 aa19.23■□□□□ 0.67
UBAP1-201ENST00000297661 ANP32BQ92688 251 aaKnown RBP19.23■□□□□ 0.67
UBAP1-201ENST00000297661 SNX21Q969T3 373 aa19.23■□□□□ 0.67
UBAP1-201ENST00000297661 FAM13BQ9NYF5 915 aa19.23■□□□□ 0.67
UBAP1-201ENST00000297661 TERF1P54274 439 aa19.22■□□□□ 0.67
UBAP1-201ENST00000297661 CADPS2Q86UW7 1296 aa19.22■□□□□ 0.67
UBAP1-201ENST00000297661 PTMSP20962 102 aa19.22■□□□□ 0.67
UBAP1-201ENST00000297661 OTUD7AQ8TE49 926 aaPredicted RBP19.22■□□□□ 0.67
UBAP1-201ENST00000297661 AATKQ6ZMQ8 1374 aa19.22■□□□□ 0.67
UBAP1-201ENST00000297661 FOXO3O43524 673 aa19.21■□□□□ 0.67
UBAP1-201ENST00000297661 API5Q9BZZ5 524 aaKnown RBP19.21■□□□□ 0.67
UBAP1-201ENST00000297661 GSPT1P15170 499 aaKnown RBP19.21■□□□□ 0.67
UBAP1-201ENST00000297661 ACEP12821 1306 aa19.2■□□□□ 0.66
UBAP1-201ENST00000297661 SMARCA5O60264 1052 aaPredicted RBP19.2■□□□□ 0.66
UBAP1-201ENST00000297661 MAP7D2Q96T17 732 aa19.2■□□□□ 0.66
UBAP1-201ENST00000297661 R3HCC1Q9Y3T6 440 aaKnown RBP19.2■□□□□ 0.66
UBAP1-201ENST00000297661 TTC21BQ7Z4L5 1316 aa19.19■□□□□ 0.66
UBAP1-201ENST00000297661 CHMP4BQ9H444 224 aaKnown RBP19.18■□□□□ 0.66
UBAP1-201ENST00000297661 TOM1O60784 492 aa19.17■□□□□ 0.66
UBAP1-201ENST00000297661 MST1RQ04912 1400 aa19.17■□□□□ 0.66
UBAP1-201ENST00000297661 PLEKHM2Q8IWE5 1019 aa19.17■□□□□ 0.66
UBAP1-201ENST00000297661 BRINP3Q76B58 766 aa19.16■□□□□ 0.66
UBAP1-201ENST00000297661 MEIS3Q99687 375 aa19.16■□□□□ 0.66
UBAP1-201ENST00000297661 C1orf167Q5SNV9 1468 aa19.15■□□□□ 0.66
UBAP1-201ENST00000297661 SLC4A10Q6U841 1118 aa19.15■□□□□ 0.66
UBAP1-201ENST00000297661 NGDNQ8NEJ9 315 aaKnown RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms