RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 RBM42Q9BTD8 480 aaKnown RBP23.63■■□□□ 1.37
TRA2A-201ENST00000297071 KIAA0232Q92628 1395 aa23.63■■□□□ 1.37
TRA2A-201ENST00000297071 C1orf115Q9H7X2 142 aa23.63■■□□□ 1.37
TRA2A-201ENST00000297071 CASC1Q6TDU7 716 aa23.62■■□□□ 1.37
TRA2A-201ENST00000297071 OFD1O75665 1012 aa23.61■■□□□ 1.37
TRA2A-201ENST00000297071 LMBRD1Q9NUN5 540 aa23.61■■□□□ 1.37
TRA2A-201ENST00000297071 RGS12O14924 1447 aa23.61■■□□□ 1.37
TRA2A-201ENST00000297071 ST18O60284 1047 aa23.6■■□□□ 1.37
TRA2A-201ENST00000297071 PDLIM2Q96JY6 352 aa23.6■■□□□ 1.37
TRA2A-201ENST00000297071 PTPRCP08575 1304 aa23.6■■□□□ 1.37
TRA2A-201ENST00000297071 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.59■■□□□ 1.37
TRA2A-201ENST00000297071 C8orf58Q8NAV2 365 aa23.59■■□□□ 1.37
TRA2A-201ENST00000297071 REC8O95072 547 aa23.58■■□□□ 1.37
TRA2A-201ENST00000297071 N4BP2Q86UW6 1770 aaPredicted RBP23.58■■□□□ 1.36
TRA2A-201ENST00000297071 RGPD1P0DJD0 1748 aa23.57■■□□□ 1.36
TRA2A-201ENST00000297071 OSBPL3Q9H4L5 887 aa23.57■■□□□ 1.36
TRA2A-201ENST00000297071 PPP6R1Q9UPN7 881 aa23.57■■□□□ 1.36
TRA2A-201ENST00000297071 CACNA1FO60840 1977 aa23.57■■□□□ 1.36
TRA2A-201ENST00000297071 SPATA31D1Q6ZQQ2 1576 aa23.57■■□□□ 1.36
TRA2A-201ENST00000297071 MCM5P33992 734 aa23.56■■□□□ 1.36
TRA2A-201ENST00000297071 TSPOAP1O95153 1857 aa23.56■■□□□ 1.36
TRA2A-201ENST00000297071 HMOX1P09601 288 aa23.56■■□□□ 1.36
TRA2A-201ENST00000297071 SIRT1Q96EB6 747 aa23.56■■□□□ 1.36
TRA2A-201ENST00000297071 AGLP35573 1532 aa23.55■■□□□ 1.36
TRA2A-201ENST00000297071 ZSCAN23Q3MJ62 389 aa23.55■■□□□ 1.36
TRA2A-201ENST00000297071 THUMPD2Q9BTF0 503 aaKnown RBP23.55■■□□□ 1.36
TRA2A-201ENST00000297071 FOXD4L1Q9NU39 408 aa23.55■■□□□ 1.36
TRA2A-201ENST00000297071 NRXN3Q9Y4C0 1643 aa23.55■■□□□ 1.36
TRA2A-201ENST00000297071 ZNF500O60304 480 aaPredicted RBP23.54■■□□□ 1.36
TRA2A-201ENST00000297071 MSNP26038 577 aaKnown RBP23.54■■□□□ 1.36
TRA2A-201ENST00000297071 MCM2P49736 904 aa23.54■■□□□ 1.36
TRA2A-201ENST00000297071 CEP85Q6P2H3 762 aa23.54■■□□□ 1.36
TRA2A-201ENST00000297071 RTL1A6NKG5 1358 aa23.54■■□□□ 1.36
TRA2A-201ENST00000297071 NALCNQ8IZF0 1738 aa23.54■■□□□ 1.36
TRA2A-201ENST00000297071 A2ML1A8K2U0 1454 aa23.54■■□□□ 1.36
TRA2A-201ENST00000297071 MCTP1Q6DN14 999 aa23.53■■□□□ 1.36
TRA2A-201ENST00000297071 PDCL3Q9H2J4 239 aa23.53■■□□□ 1.36
TRA2A-201ENST00000297071 NOL7Q9UMY1 257 aaKnown RBP23.53■■□□□ 1.36
TRA2A-201ENST00000297071 IL17RAQ96F46 866 aa23.52■■□□□ 1.36
TRA2A-201ENST00000297071 RAPGEF3O95398 923 aa23.52■■□□□ 1.36
TRA2A-201ENST00000297071 SDSP20132 328 aa23.52■■□□□ 1.36
TRA2A-201ENST00000297071 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.52■■□□□ 1.36
TRA2A-201ENST00000297071 EMILIN1Q9Y6C2 1016 aa23.52■■□□□ 1.36
TRA2A-201ENST00000297071 TECPR2O15040 1411 aa23.51■■□□□ 1.35
TRA2A-201ENST00000297071 CHL1O00533 1208 aa23.51■■□□□ 1.35
TRA2A-201ENST00000297071 CPS1P31327 1500 aa23.5■■□□□ 1.35
TRA2A-201ENST00000297071 ERC2O15083 957 aa23.5■■□□□ 1.35
TRA2A-201ENST00000297071 MBD3O95983 291 aa23.5■■□□□ 1.35
TRA2A-201ENST00000297071 WASLO00401 505 aaPredicted RBP23.49■■□□□ 1.35
TRA2A-201ENST00000297071 HMMRO75330 724 aa23.49■■□□□ 1.35
TRA2A-201ENST00000297071 KIAA1211Q6ZU35 1233 aa23.49■■□□□ 1.35
TRA2A-201ENST00000297071 EPB41L2O43491 1005 aaKnown RBP23.49■■□□□ 1.35
TRA2A-201ENST00000297071 COG3Q96JB2 828 aa23.49■■□□□ 1.35
TRA2A-201ENST00000297071 CAVIN1Q6NZI2 390 aaKnown RBP23.48■■□□□ 1.35
TRA2A-201ENST00000297071 LRSAM1Q6UWE0 723 aa23.48■■□□□ 1.35
TRA2A-201ENST00000297071 MAP7D2Q96T17 732 aa23.48■■□□□ 1.35
TRA2A-201ENST00000297071 SSH2Q76I76 1423 aa23.48■■□□□ 1.35
TRA2A-201ENST00000297071 ELL2O00472 640 aaPredicted RBP23.47■■□□□ 1.35
TRA2A-201ENST00000297071 KLHL34Q8N239 644 aa23.47■■□□□ 1.35
TRA2A-201ENST00000297071 TOPAZ1Q8N9V7 1692 aa23.47■■□□□ 1.35
TRA2A-201ENST00000297071 ARHGEF10O15013 1369 aa23.46■■□□□ 1.35
TRA2A-201ENST00000297071 ANAPC15P60006 121 aa23.46■■□□□ 1.35
TRA2A-201ENST00000297071 CSPP1Q1MSJ5 1256 aa23.46■■□□□ 1.35
TRA2A-201ENST00000297071 RBSNQ9H1K0 784 aa23.46■■□□□ 1.35
TRA2A-201ENST00000297071 ZDHHC9Q9Y397 364 aa23.46■■□□□ 1.35
TRA2A-201ENST00000297071 MSH6P52701 1360 aa23.46■■□□□ 1.35
TRA2A-201ENST00000297071 CUL4AQ13619 759 aa23.45■■□□□ 1.34
TRA2A-201ENST00000297071 FMN2Q9NZ56 1722 aa23.45■■□□□ 1.34
TRA2A-201ENST00000297071 C16orf71Q8IYS4 520 aaPredicted RBP23.45■■□□□ 1.34
TRA2A-201ENST00000297071 INTS4Q96HW7 963 aaKnown RBP23.45■■□□□ 1.34
TRA2A-201ENST00000297071 NME9Q86XW9 330 aa23.44■■□□□ 1.34
TRA2A-201ENST00000297071 GPT2Q8TD30 523 aa23.43■■□□□ 1.34
TRA2A-201ENST00000297071 ZKSCAN5Q9Y2L8 839 aa23.43■■□□□ 1.34
TRA2A-201ENST00000297071 CCDC61Q9Y6R9 512 aa23.42■■□□□ 1.34
TRA2A-201ENST00000297071 CRB1P82279 1406 aa23.42■■□□□ 1.34
TRA2A-201ENST00000297071 FBLN1P23142 703 aa23.41■■□□□ 1.34
TRA2A-201ENST00000297071 PRIM1P49642 420 aaKnown RBP23.41■■□□□ 1.34
TRA2A-201ENST00000297071 CCT4P50991 539 aaKnown RBP23.41■■□□□ 1.34
TRA2A-201ENST00000297071 CCDC39Q9UFE4 941 aa23.41■■□□□ 1.34
TRA2A-201ENST00000297071 SALL3Q9BXA9 1300 aa23.41■■□□□ 1.34
TRA2A-201ENST00000297071 PRPF40AO75400 957 aaKnown RBP23.4■■□□□ 1.34
TRA2A-201ENST00000297071 BRD1O95696 1058 aa23.4■■□□□ 1.34
TRA2A-201ENST00000297071 WAPLQ7Z5K2 1190 aa23.4■■□□□ 1.34
TRA2A-201ENST00000297071 XRN1Q8IZH2 1706 aaKnown RBP23.4■■□□□ 1.34
TRA2A-201ENST00000297071 FAM208AQ9UK61 1670 aaKnown RBP23.39■■□□□ 1.34
TRA2A-201ENST00000297071 FAM83GA6ND36 823 aa23.39■■□□□ 1.33
TRA2A-201ENST00000297071 MCCP23508 829 aa23.39■■□□□ 1.33
TRA2A-201ENST00000297071 PDE1AP54750 535 aa23.39■■□□□ 1.33
TRA2A-201ENST00000297071 PKP1Q13835 747 aa23.39■■□□□ 1.33
TRA2A-201ENST00000297071 ZGPATQ8N5A5 531 aaKnown RBP23.39■■□□□ 1.33
TRA2A-201ENST00000297071 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.39■■□□□ 1.33
TRA2A-201ENST00000297071 OTUD7AQ8TE49 926 aaPredicted RBP23.39■■□□□ 1.33
TRA2A-201ENST00000297071 NUDT16Q96DE0 195 aaKnown RBP23.39■■□□□ 1.33
TRA2A-201ENST00000297071 OVOS2A0A0J9YW53 1432 aa23.38■■□□□ 1.33
TRA2A-201ENST00000297071 OVOS2Q6IE36 1432 aa23.38■■□□□ 1.33
TRA2A-201ENST00000297071 LRRC37A3O60309 1634 aa23.38■■□□□ 1.33
TRA2A-201ENST00000297071 NCLP19338 710 aaKnown RBP23.38■■□□□ 1.33
TRA2A-201ENST00000297071 MTERF4Q7Z6M4 381 aaKnown RBP23.38■■□□□ 1.33
TRA2A-201ENST00000297071 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.38■■□□□ 1.33
TRA2A-201ENST00000297071 PEAK1Q9H792 1746 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms