RNA–Protein interactions for RNA: ENST00000295887.5

CDS1-201, Transcript of CDP-diacylglycerol synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDS1, Length 4,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDS1-201ENST00000295887 ZRANB1Q9UGI0 708 aa19.9■□□□□ 0.78
CDS1-201ENST00000295887 LARP1BQ659C4 914 aaKnown RBP19.9■□□□□ 0.78
CDS1-201ENST00000295887 AACSQ86V21 672 aa19.9■□□□□ 0.78
CDS1-201ENST00000295887 MEIS3Q99687 375 aa19.9■□□□□ 0.78
CDS1-201ENST00000295887 FERMT3Q86UX7 667 aa19.89■□□□□ 0.78
CDS1-201ENST00000295887 LRRFIP2Q9Y608 721 aaKnown RBP19.89■□□□□ 0.78
CDS1-201ENST00000295887 GNAT3A8MTJ3 354 aa19.89■□□□□ 0.77
CDS1-201ENST00000295887 USHBP1Q8N6Y0 703 aa19.89■□□□□ 0.77
CDS1-201ENST00000295887 CHMP4CQ96CF2 233 aa19.89■□□□□ 0.77
CDS1-201ENST00000295887 PHACTR3Q96KR7 559 aa19.89■□□□□ 0.77
CDS1-201ENST00000295887 ZBTB40Q9NUA8 1239 aa19.89■□□□□ 0.77
CDS1-201ENST00000295887 KDM4AO75164 1064 aa19.88■□□□□ 0.77
CDS1-201ENST00000295887 LRRFIP1Q32MZ4 808 aaKnown RBP19.88■□□□□ 0.77
CDS1-201ENST00000295887 TRDNQ13061 729 aa19.88■□□□□ 0.77
CDS1-201ENST00000295887 SMC5Q8IY18 1101 aa19.88■□□□□ 0.77
CDS1-201ENST00000295887 MYL6BP14649 208 aa19.88■□□□□ 0.77
CDS1-201ENST00000295887 GCC2Q8IWJ2 1684 aa19.87■□□□□ 0.77
CDS1-201ENST00000295887 TTC22Q5TAA0 569 aa19.87■□□□□ 0.77
CDS1-201ENST00000295887 HOMER1Q86YM7 354 aa19.87■□□□□ 0.77
CDS1-201ENST00000295887 POLKQ9UBT6 870 aa19.87■□□□□ 0.77
CDS1-201ENST00000295887 SYTL4Q96C24 671 aaPredicted RBP19.87■□□□□ 0.77
CDS1-201ENST00000295887 FMNL2Q96PY5 1086 aa19.87■□□□□ 0.77
CDS1-201ENST00000295887 ZMYM4Q5VZL5 1548 aa19.87■□□□□ 0.77
CDS1-201ENST00000295887 KRT24Q2M2I5 525 aa19.87■□□□□ 0.77
CDS1-201ENST00000295887 SDSP20132 328 aa19.86■□□□□ 0.77
CDS1-201ENST00000295887 CASTP20810 708 aaKnown RBP19.86■□□□□ 0.77
CDS1-201ENST00000295887 ERC1Q8IUD2 1116 aa19.86■□□□□ 0.77
CDS1-201ENST00000295887 AEBP1Q8IUX7 1158 aa19.86■□□□□ 0.77
CDS1-201ENST00000295887 LETM1O95202 739 aaPredicted RBP19.86■□□□□ 0.77
CDS1-201ENST00000295887 ANKLE2Q86XL3 938 aa19.86■□□□□ 0.77
CDS1-201ENST00000295887 RBM27Q9P2N5 1060 aaKnown RBP19.86■□□□□ 0.77
CDS1-201ENST00000295887 PES1O00541 588 aaKnown RBP19.86■□□□□ 0.77
CDS1-201ENST00000295887 GTF2E1P29083 439 aaPredicted RBP19.86■□□□□ 0.77
CDS1-201ENST00000295887 RALYLQ86SE5 291 aaKnown RBP19.86■□□□□ 0.77
CDS1-201ENST00000295887 HSP90AB2PQ58FF8 381 aa19.86■□□□□ 0.77
CDS1-201ENST00000295887 SYNE3Q6ZMZ3 975 aa19.86■□□□□ 0.77
CDS1-201ENST00000295887 PDRG1Q9NUG6 133 aa19.86■□□□□ 0.77
CDS1-201ENST00000295887 BLMP54132 1417 aaPredicted RBP19.85■□□□□ 0.77
CDS1-201ENST00000295887 VAMP4O75379 141 aa19.85■□□□□ 0.77
CDS1-201ENST00000295887 FLIIQ13045 1269 aa19.85■□□□□ 0.77
CDS1-201ENST00000295887 MRPL50Q8N5N7 158 aaKnown RBP19.85■□□□□ 0.77
CDS1-201ENST00000295887 KRT85P78386 507 aa19.85■□□□□ 0.77
CDS1-201ENST00000295887 CCDC83Q8IWF9 413 aa19.85■□□□□ 0.77
CDS1-201ENST00000295887 AMOTL2Q9Y2J4 779 aa19.85■□□□□ 0.77
CDS1-201ENST00000295887 TRIM29Q14134 588 aa19.84■□□□□ 0.77
CDS1-201ENST00000295887 TAF7Q15545 349 aaPredicted RBP19.84■□□□□ 0.77
CDS1-201ENST00000295887 BLOC1S2Q6QNY1 142 aa19.84■□□□□ 0.77
CDS1-201ENST00000295887 ARHGAP45Q92619 1136 aa19.84■□□□□ 0.77
CDS1-201ENST00000295887 BTBD11A6QL63 1104 aa19.84■□□□□ 0.77
CDS1-201ENST00000295887 KIF1BPQ96EK5 621 aa19.84■□□□□ 0.77
CDS1-201ENST00000295887 CCDC192P0DO97 292 aa19.84■□□□□ 0.77
CDS1-201ENST00000295887 NFXL1Q6ZNB6 911 aa19.83■□□□□ 0.77
CDS1-201ENST00000295887 EIF2AK4Q9P2K8 1649 aaKnown RBP19.83■□□□□ 0.77
CDS1-201ENST00000295887 UQCRHLA0A096LP55 91 aa19.83■□□□□ 0.77
CDS1-201ENST00000295887 HIP1O00291 1037 aa19.83■□□□□ 0.77
CDS1-201ENST00000295887 UQCRHP07919 91 aa19.83■□□□□ 0.77
CDS1-201ENST00000295887 AKAP17AQ02040 695 aaKnown RBP19.83■□□□□ 0.76
CDS1-201ENST00000295887 KINO60870 393 aaKnown RBP19.82■□□□□ 0.76
CDS1-201ENST00000295887 PRPF40BQ6NWY9 871 aaKnown RBP19.82■□□□□ 0.76
CDS1-201ENST00000295887 ABCC2Q92887 1545 aa19.82■□□□□ 0.76
CDS1-201ENST00000295887 KLHL40Q2TBA0 621 aa19.82■□□□□ 0.76
CDS1-201ENST00000295887 TNMDQ9H2S6 317 aa19.82■□□□□ 0.76
CDS1-201ENST00000295887 TPD52L1Q16890 204 aaPredicted RBP19.81■□□□□ 0.76
CDS1-201ENST00000295887 SPG7Q9UQ90 795 aa19.81■□□□□ 0.76
CDS1-201ENST00000295887 ZC3H6P61129 1189 aaKnown RBP19.81■□□□□ 0.76
CDS1-201ENST00000295887 NPC1L1Q9UHC9 1359 aa19.81■□□□□ 0.76
CDS1-201ENST00000295887 ZNF771Q7L3S4 317 aaPredicted RBP19.8■□□□□ 0.76
CDS1-201ENST00000295887 MAP7D2Q96T17 732 aa19.8■□□□□ 0.76
CDS1-201ENST00000295887 A0A1W2PP64 1363 aa19.8■□□□□ 0.76
CDS1-201ENST00000295887 PTPRCP08575 1304 aa19.8■□□□□ 0.76
CDS1-201ENST00000295887 GLRX3O76003 335 aaKnown RBP19.79■□□□□ 0.76
CDS1-201ENST00000295887 ANXA1P04083 346 aa19.79■□□□□ 0.76
CDS1-201ENST00000295887 ANKRD44Q8N8A2 993 aa19.79■□□□□ 0.76
CDS1-201ENST00000295887 ZNF518AQ6AHZ1 1483 aa19.79■□□□□ 0.76
CDS1-201ENST00000295887 HMGN5P82970 282 aaKnown RBP19.79■□□□□ 0.76
CDS1-201ENST00000295887 SNX21Q969T3 373 aa19.79■□□□□ 0.76
CDS1-201ENST00000295887 DDX11Q96FC9 970 aa19.78■□□□□ 0.76
CDS1-201ENST00000295887 BOLA2Q9H3K6 86 aa19.78■□□□□ 0.76
CDS1-201ENST00000295887 FOXO3O43524 673 aa19.78■□□□□ 0.76
CDS1-201ENST00000295887 CAMK4Q16566 473 aa19.78■□□□□ 0.76
CDS1-201ENST00000295887 ATP2B1P20020 1258 aa19.77■□□□□ 0.76
CDS1-201ENST00000295887 TMX3Q96JJ7 454 aa19.77■□□□□ 0.76
CDS1-201ENST00000295887 SPATA32Q96LK8 384 aa19.77■□□□□ 0.76
CDS1-201ENST00000295887 USP25Q9UHP3 1055 aa19.77■□□□□ 0.76
CDS1-201ENST00000295887 TRIM35Q9UPQ4 493 aa19.77■□□□□ 0.76
CDS1-201ENST00000295887 ACEP12821 1306 aa19.77■□□□□ 0.76
CDS1-201ENST00000295887 NCKAP5LQ9HCH0 1330 aa19.77■□□□□ 0.76
CDS1-201ENST00000295887 TPM3P06753 285 aa19.77■□□□□ 0.76
CDS1-201ENST00000295887 MAGI2Q86UL8 1455 aa19.77■□□□□ 0.76
CDS1-201ENST00000295887 PDE1AP54750 535 aa19.76■□□□□ 0.75
CDS1-201ENST00000295887 CCDC8Q9H0W5 538 aaPredicted RBP19.76■□□□□ 0.75
CDS1-201ENST00000295887 RRP9O43818 475 aaKnown RBP19.76■□□□□ 0.75
CDS1-201ENST00000295887 MPRIPQ6WCQ1 1025 aa19.76■□□□□ 0.75
CDS1-201ENST00000295887 POGZQ7Z3K3 1410 aa19.76■□□□□ 0.75
CDS1-201ENST00000295887 NUP62CLQ9H1M0 184 aa19.76■□□□□ 0.75
CDS1-201ENST00000295887 ANKRD1Q15327 319 aa19.76■□□□□ 0.75
CDS1-201ENST00000295887 ME1P48163 572 aa19.76■□□□□ 0.75
CDS1-201ENST00000295887 STRN4Q9NRL3 753 aa19.76■□□□□ 0.75
CDS1-201ENST00000295887 ZBTB7BO15156 539 aaPredicted RBP19.75■□□□□ 0.75
CDS1-201ENST00000295887 ZSCAN23Q3MJ62 389 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms