RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 CASC1Q6TDU7 716 aa23.66■■□□□ 1.38
LSM12-201ENST00000293406 ERBB4Q15303 1308 aa23.66■■□□□ 1.38
LSM12-201ENST00000293406 SPATA31D1Q6ZQQ2 1576 aa23.66■■□□□ 1.38
LSM12-201ENST00000293406 NUCB2P80303 420 aa23.66■■□□□ 1.38
LSM12-201ENST00000293406 CHL1O00533 1208 aa23.65■■□□□ 1.38
LSM12-201ENST00000293406 SDSP20132 328 aa23.65■■□□□ 1.38
LSM12-201ENST00000293406 EIF4A2Q14240 407 aaKnown RBP23.65■■□□□ 1.38
LSM12-201ENST00000293406 MSH6P52701 1360 aa23.65■■□□□ 1.38
LSM12-201ENST00000293406 PTPRCP08575 1304 aa23.64■■□□□ 1.38
LSM12-201ENST00000293406 RTL1A6NKG5 1358 aa23.64■■□□□ 1.37
LSM12-201ENST00000293406 IBTKQ9P2D0 1353 aaPredicted RBP23.64■■□□□ 1.37
LSM12-201ENST00000293406 C3P01024 1663 aa23.63■■□□□ 1.37
LSM12-201ENST00000293406 NRXN3Q9Y4C0 1643 aa23.63■■□□□ 1.37
LSM12-201ENST00000293406 KIAA0232Q92628 1395 aa23.63■■□□□ 1.37
LSM12-201ENST00000293406 APBB1O00213 710 aa23.63■■□□□ 1.37
LSM12-201ENST00000293406 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.63■■□□□ 1.37
LSM12-201ENST00000293406 SMARCA5O60264 1052 aaPredicted RBP23.62■■□□□ 1.37
LSM12-201ENST00000293406 MCM10Q7L590 875 aa23.62■■□□□ 1.37
LSM12-201ENST00000293406 NRKQ7Z2Y5 1582 aa23.62■■□□□ 1.37
LSM12-201ENST00000293406 UBE2Q2Q8WVN8 375 aa23.62■■□□□ 1.37
LSM12-201ENST00000293406 MEIS3Q99687 375 aa23.62■■□□□ 1.37
LSM12-201ENST00000293406 NASPP49321 788 aaPredicted RBP23.61■■□□□ 1.37
LSM12-201ENST00000293406 MCTP1Q6DN14 999 aa23.61■■□□□ 1.37
LSM12-201ENST00000293406 ST18O60284 1047 aa23.61■■□□□ 1.37
LSM12-201ENST00000293406 CCDC173Q0VFZ6 552 aa23.61■■□□□ 1.37
LSM12-201ENST00000293406 AGLP35573 1532 aa23.61■■□□□ 1.37
LSM12-201ENST00000293406 CYP2E1P05181 493 aaPredicted RBP23.6■■□□□ 1.37
LSM12-201ENST00000293406 AKAP12Q02952 1782 aa23.6■■□□□ 1.37
LSM12-201ENST00000293406 SIRT1Q96EB6 747 aa23.6■■□□□ 1.37
LSM12-201ENST00000293406 CWC22Q9HCG8 908 aaKnown RBP23.6■■□□□ 1.37
LSM12-201ENST00000293406 ITSN1Q15811 1721 aa23.59■■□□□ 1.37
LSM12-201ENST00000293406 REC8O95072 547 aa23.59■■□□□ 1.37
LSM12-201ENST00000293406 ANP32BQ92688 251 aaKnown RBP23.59■■□□□ 1.37
LSM12-201ENST00000293406 PRR36Q9H6K5 1346 aa23.58■■□□□ 1.37
LSM12-201ENST00000293406 AK9Q5TCS8 1911 aa23.58■■□□□ 1.36
LSM12-201ENST00000293406 MLECQ14165 292 aa23.58■■□□□ 1.36
LSM12-201ENST00000293406 PPP1R9BQ96SB3 815 aa23.58■■□□□ 1.36
LSM12-201ENST00000293406 HMMRO75330 724 aa23.57■■□□□ 1.36
LSM12-201ENST00000293406 SLC4A2P04920 1241 aa23.57■■□□□ 1.36
LSM12-201ENST00000293406 TECPR2O15040 1411 aa23.57■■□□□ 1.36
LSM12-201ENST00000293406 PKP1Q13835 747 aa23.56■■□□□ 1.36
LSM12-201ENST00000293406 LMBRD1Q9NUN5 540 aa23.56■■□□□ 1.36
LSM12-201ENST00000293406 ERC2O15083 957 aa23.55■■□□□ 1.36
LSM12-201ENST00000293406 NCLP19338 710 aaKnown RBP23.55■■□□□ 1.36
LSM12-201ENST00000293406 ZNF445P59923 1031 aa23.55■■□□□ 1.36
LSM12-201ENST00000293406 TTC21BQ7Z4L5 1316 aa23.55■■□□□ 1.36
LSM12-201ENST00000293406 CAVIN1Q6NZI2 390 aaKnown RBP23.54■■□□□ 1.36
LSM12-201ENST00000293406 ZGPATQ8N5A5 531 aaKnown RBP23.54■■□□□ 1.36
LSM12-201ENST00000293406 FAM69CQ0P6D2 419 aa23.53■■□□□ 1.36
LSM12-201ENST00000293406 HSP90AB2PQ58FF8 381 aa23.53■■□□□ 1.36
LSM12-201ENST00000293406 CRB1P82279 1406 aa23.53■■□□□ 1.36
LSM12-201ENST00000293406 ZSCAN23Q3MJ62 389 aa23.53■■□□□ 1.36
LSM12-201ENST00000293406 HDGFP51858 240 aaKnown RBP23.52■■□□□ 1.36
LSM12-201ENST00000293406 SLC4A10Q6U841 1118 aa23.51■■□□□ 1.35
LSM12-201ENST00000293406 OSBPL3Q9H4L5 887 aa23.51■■□□□ 1.35
LSM12-201ENST00000293406 PDE1AP54750 535 aa23.51■■□□□ 1.35
LSM12-201ENST00000293406 MIS18AQ9NYP9 233 aa23.51■■□□□ 1.35
LSM12-201ENST00000293406 OVOS2A0A0J9YW53 1432 aa23.51■■□□□ 1.35
LSM12-201ENST00000293406 OVOS2Q6IE36 1432 aa23.51■■□□□ 1.35
LSM12-201ENST00000293406 CCT4P50991 539 aaKnown RBP23.5■■□□□ 1.35
LSM12-201ENST00000293406 ACEP12821 1306 aa23.5■■□□□ 1.35
LSM12-201ENST00000293406 F6X3S4 739 aa23.49■■□□□ 1.35
LSM12-201ENST00000293406 PRPF40AO75400 957 aaKnown RBP23.49■■□□□ 1.35
LSM12-201ENST00000293406 G2E3Q7L622 706 aa23.49■■□□□ 1.35
LSM12-201ENST00000293406 TSPYL4Q9UJ04 414 aa23.49■■□□□ 1.35
LSM12-201ENST00000293406 ZDHHC9Q9Y397 364 aa23.48■■□□□ 1.35
LSM12-201ENST00000293406 ZSCAN30Q86W11 494 aa23.48■■□□□ 1.35
LSM12-201ENST00000293406 RTF1Q92541 710 aaKnown RBP23.48■■□□□ 1.35
LSM12-201ENST00000293406 ROBO2Q9HCK4 1378 aa23.47■■□□□ 1.35
LSM12-201ENST00000293406 RGPD1P0DJD0 1748 aa23.46■■□□□ 1.35
LSM12-201ENST00000293406 PEAK1Q9H792 1746 aa23.46■■□□□ 1.35
LSM12-201ENST00000293406 SOX12O15370 315 aa23.46■■□□□ 1.35
LSM12-201ENST00000293406 GNAI2P04899 355 aa23.46■■□□□ 1.35
LSM12-201ENST00000293406 CYB5RLQ6IPT4 315 aa23.46■■□□□ 1.35
LSM12-201ENST00000293406 FOXO3O43524 673 aa23.45■■□□□ 1.35
LSM12-201ENST00000293406 NUTM2FA1L443 756 aa23.45■■□□□ 1.34
LSM12-201ENST00000293406 NEK4P51957 841 aa23.45■■□□□ 1.34
LSM12-201ENST00000293406 GPT2Q8TD30 523 aa23.45■■□□□ 1.34
LSM12-201ENST00000293406 ARHGEF10O15013 1369 aa23.45■■□□□ 1.34
LSM12-201ENST00000293406 MAP3K19Q56UN5 1328 aa23.45■■□□□ 1.34
LSM12-201ENST00000293406 USP6P35125 1406 aa23.44■■□□□ 1.34
LSM12-201ENST00000293406 PLEKHG3A1L390 1219 aa23.44■■□□□ 1.34
LSM12-201ENST00000293406 MTHFSDQ2M296 383 aaKnown RBP23.44■■□□□ 1.34
LSM12-201ENST00000293406 ESF1Q9H501 851 aaKnown RBP23.44■■□□□ 1.34
LSM12-201ENST00000293406 EXOC6BQ9Y2D4 811 aa23.44■■□□□ 1.34
LSM12-201ENST00000293406 USP31Q70CQ4 1352 aa23.44■■□□□ 1.34
LSM12-201ENST00000293406 MSNP26038 577 aaKnown RBP23.43■■□□□ 1.34
LSM12-201ENST00000293406 RBSNQ9H1K0 784 aa23.43■■□□□ 1.34
LSM12-201ENST00000293406 PRIM1P49642 420 aaKnown RBP23.43■■□□□ 1.34
LSM12-201ENST00000293406 MCM2P49736 904 aa23.42■■□□□ 1.34
LSM12-201ENST00000293406 TMX3Q96JJ7 454 aa23.42■■□□□ 1.34
LSM12-201ENST00000293406 STK31Q9BXU1 1019 aa23.42■■□□□ 1.34
LSM12-201ENST00000293406 LRRCC1Q9C099 1032 aa23.42■■□□□ 1.34
LSM12-201ENST00000293406 RBM27Q9P2N5 1060 aaKnown RBP23.42■■□□□ 1.34
LSM12-201ENST00000293406 TSPOAP1O95153 1857 aa23.42■■□□□ 1.34
LSM12-201ENST00000293406 HSP90AA2PQ14568 343 aaPredicted RBP23.42■■□□□ 1.34
LSM12-201ENST00000293406 TSHZ3Q63HK5 1081 aa23.42■■□□□ 1.34
LSM12-201ENST00000293406 ESYT1Q9BSJ8 1104 aa23.42■■□□□ 1.34
LSM12-201ENST00000293406 NALCNQ8IZF0 1738 aa23.42■■□□□ 1.34
LSM12-201ENST00000293406 DIP2BQ9P265 1576 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms