RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 KRT24Q2M2I5 525 aa28.23■■■□□ 2.11
MCF2L-201ENST00000261963 MAP3K19Q56UN5 1328 aa28.23■■■□□ 2.11
MCF2L-201ENST00000261963 RRP9O43818 475 aaKnown RBP28.23■■■□□ 2.11
MCF2L-201ENST00000261963 VSIG10Q8N0Z9 540 aa28.23■■■□□ 2.11
MCF2L-201ENST00000261963 PLPPR3Q6T4P5 718 aa28.22■■■□□ 2.11
MCF2L-201ENST00000261963 DIP2AQ14689 1571 aa28.21■■■□□ 2.11
MCF2L-201ENST00000261963 ANKRD45Q5TZF3 282 aa28.21■■■□□ 2.11
MCF2L-201ENST00000261963 ARHGEF10O15013 1369 aa28.2■■■□□ 2.11
MCF2L-201ENST00000261963 DNAJC5Q9H3Z4 198 aa28.2■■■□□ 2.11
MCF2L-201ENST00000261963 KIF24Q5T7B8 1368 aa28.19■■■□□ 2.1
MCF2L-201ENST00000261963 ZMYND15Q9H091 742 aa28.19■■■□□ 2.1
MCF2L-201ENST00000261963 KIAA0232Q92628 1395 aa28.18■■■□□ 2.1
MCF2L-201ENST00000261963 RGS12O14924 1447 aa28.18■■■□□ 2.1
MCF2L-201ENST00000261963 CRB1P82279 1406 aa28.18■■■□□ 2.1
MCF2L-201ENST00000261963 BMP2KLQ5H9B9 411 aa28.18■■■□□ 2.1
MCF2L-201ENST00000261963 MCM4P33991 863 aa28.17■■■□□ 2.1
MCF2L-201ENST00000261963 PANK2Q9BZ23 570 aa28.17■■■□□ 2.1
MCF2L-201ENST00000261963 SBNO1A3KN83 1393 aa28.17■■■□□ 2.1
MCF2L-201ENST00000261963 THEMISQ8N1K5 641 aaPredicted RBP28.17■■■□□ 2.1
MCF2L-201ENST00000261963 NGDNQ8NEJ9 315 aaKnown RBP28.17■■■□□ 2.1
MCF2L-201ENST00000261963 FLT4P35916 1363 aa28.16■■■□□ 2.1
MCF2L-201ENST00000261963 INTS3Q68E01 1043 aaKnown RBP28.16■■■□□ 2.1
MCF2L-201ENST00000261963 RGPD8O14715 1765 aaPredicted RBP28.14■■■□□ 2.1
MCF2L-201ENST00000261963 FOXO3O43524 673 aa28.14■■■□□ 2.1
MCF2L-201ENST00000261963 GZF1Q9H116 711 aaPredicted RBP28.14■■■□□ 2.1
MCF2L-201ENST00000261963 KDRP35968 1356 aa28.14■■■□□ 2.09
MCF2L-201ENST00000261963 FER1L4A9Z1Z3 1794 aa28.13■■■□□ 2.09
MCF2L-201ENST00000261963 XRN1Q8IZH2 1706 aaKnown RBP28.13■■■□□ 2.09
MCF2L-201ENST00000261963 TRHP20396 242 aaPredicted RBP28.13■■■□□ 2.09
MCF2L-201ENST00000261963 HAP1P54257 671 aaPredicted RBP28.13■■■□□ 2.09
MCF2L-201ENST00000261963 MTHFSDQ2M296 383 aaKnown RBP28.13■■■□□ 2.09
MCF2L-201ENST00000261963 FMN2Q9NZ56 1722 aa28.12■■■□□ 2.09
MCF2L-201ENST00000261963 PIK3C2AO00443 1686 aa28.12■■■□□ 2.09
MCF2L-201ENST00000261963 MRE11P49959 708 aa28.11■■■□□ 2.09
MCF2L-201ENST00000261963 RBM25P49756 843 aaKnown RBP28.1■■■□□ 2.09
MCF2L-201ENST00000261963 IGSF1Q8N6C5 1336 aa28.1■■■□□ 2.09
MCF2L-201ENST00000261963 EYA1Q99502 592 aa28.1■■■□□ 2.09
MCF2L-201ENST00000261963 CEP170BQ9Y4F5 1589 aaPredicted RBP28.1■■■□□ 2.09
MCF2L-201ENST00000261963 MIS18AQ9NYP9 233 aa28.09■■■□□ 2.09
MCF2L-201ENST00000261963 RIMS1Q86UR5 1692 aaKnown RBP28.09■■■□□ 2.09
MCF2L-201ENST00000261963 KCNA6P17658 529 aa28.09■■■□□ 2.09
MCF2L-201ENST00000261963 ANKARQ7Z5J8 1434 aa28.08■■■□□ 2.09
MCF2L-201ENST00000261963 ATP10DQ9P241 1426 aa28.08■■■□□ 2.09
MCF2L-201ENST00000261963 AMPHP49418 695 aa28.08■■■□□ 2.09
MCF2L-201ENST00000261963 TRAK2O60296 914 aa28.07■■■□□ 2.08
MCF2L-201ENST00000261963 DCTPP1Q9H773 170 aa28.07■■■□□ 2.08
MCF2L-201ENST00000261963 PTPRCP08575 1304 aa28.06■■■□□ 2.08
MCF2L-201ENST00000261963 NLRP6P59044 892 aa28.05■■■□□ 2.08
MCF2L-201ENST00000261963 SPRYD3Q8NCJ5 442 aa28.05■■■□□ 2.08
MCF2L-201ENST00000261963 CHMP5Q9NZZ3 219 aa28.05■■■□□ 2.08
MCF2L-201ENST00000261963 ANKRD44Q8N8A2 993 aa28.04■■■□□ 2.08
MCF2L-201ENST00000261963 MSH6P52701 1360 aa28.04■■■□□ 2.08
MCF2L-201ENST00000261963 RTF1Q92541 710 aaKnown RBP28.04■■■□□ 2.08
MCF2L-201ENST00000261963 SLC4A2P04920 1241 aa28.03■■■□□ 2.08
MCF2L-201ENST00000261963 TBC1D9Q6ZT07 1266 aa28.03■■■□□ 2.08
MCF2L-201ENST00000261963 TSPYL4Q9UJ04 414 aa28.03■■■□□ 2.08
MCF2L-201ENST00000261963 RTL1A6NKG5 1358 aa28.02■■■□□ 2.08
MCF2L-201ENST00000261963 GAS2L2Q8NHY3 880 aa28.02■■■□□ 2.08
MCF2L-201ENST00000261963 ESPNB1AK53 854 aa28.01■■■□□ 2.07
MCF2L-201ENST00000261963 CEP85Q6P2H3 762 aa28.01■■■□□ 2.07
MCF2L-201ENST00000261963 PLEKHM2Q8IWE5 1019 aa28.01■■■□□ 2.07
MCF2L-201ENST00000261963 GRPEL1Q9HAV7 217 aa28.01■■■□□ 2.07
MCF2L-201ENST00000261963 NUTM2GQ5VZR2 741 aa28■■■□□ 2.07
MCF2L-201ENST00000261963 MARF1Q9Y4F3 1742 aaKnown RBP28■■■□□ 2.07
MCF2L-201ENST00000261963 GSPT1P15170 499 aaKnown RBP28■■■□□ 2.07
MCF2L-201ENST00000261963 HOXC9P31274 260 aa28■■■□□ 2.07
MCF2L-201ENST00000261963 RPAP2Q8IXW5 612 aaPredicted RBP28■■■□□ 2.07
MCF2L-201ENST00000261963 MEIS3Q99687 375 aa28■■■□□ 2.07
MCF2L-201ENST00000261963 ISY1Q9ULR0 285 aaKnown RBP28■■■□□ 2.07
MCF2L-201ENST00000261963 G2E3Q7L622 706 aa27.99■■■□□ 2.07
MCF2L-201ENST00000261963 HSCBQ8IWL3 235 aa27.99■■■□□ 2.07
MCF2L-201ENST00000261963 KIF2CQ99661 725 aa27.99■■■□□ 2.07
MCF2L-201ENST00000261963 NWD1Q149M9 1564 aa27.98■■■□□ 2.07
MCF2L-201ENST00000261963 SNX21Q969T3 373 aa27.98■■■□□ 2.07
MCF2L-201ENST00000261963 DDX11L8A8MPP1 907 aa27.96■■■□□ 2.07
MCF2L-201ENST00000261963 NCOA3Q9Y6Q9 1424 aa27.96■■■□□ 2.07
MCF2L-201ENST00000261963 C16orf71Q8IYS4 520 aaPredicted RBP27.96■■■□□ 2.07
MCF2L-201ENST00000261963 HTATSF1O43719 755 aaKnown RBP27.95■■■□□ 2.06
MCF2L-201ENST00000261963 USP54Q70EL1 1684 aa27.95■■■□□ 2.06
MCF2L-201ENST00000261963 CDC45O75419 566 aa27.94■■■□□ 2.06
MCF2L-201ENST00000261963 LRRC37A3O60309 1634 aa27.94■■■□□ 2.06
MCF2L-201ENST00000261963 ABTB2Q8N961 1025 aa27.94■■■□□ 2.06
MCF2L-201ENST00000261963 F6X3S4 739 aa27.92■■■□□ 2.06
MCF2L-201ENST00000261963 OTUD7AQ8TE49 926 aaPredicted RBP27.92■■■□□ 2.06
MCF2L-201ENST00000261963 TRIM44Q96DX7 344 aaPredicted RBP27.92■■■□□ 2.06
MCF2L-201ENST00000261963 TTC22Q5TAA0 569 aa27.92■■■□□ 2.06
MCF2L-201ENST00000261963 ERBB4Q15303 1308 aa27.92■■■□□ 2.06
MCF2L-201ENST00000261963 GNAT3A8MTJ3 354 aa27.91■■■□□ 2.06
MCF2L-201ENST00000261963 DDIT3P35638 169 aa27.91■■■□□ 2.06
MCF2L-201ENST00000261963 TPM2P07951 284 aa27.9■■■□□ 2.06
MCF2L-201ENST00000261963 CCT4P50991 539 aaKnown RBP27.89■■■□□ 2.05
MCF2L-201ENST00000261963 SLC4A10Q6U841 1118 aa27.89■■■□□ 2.05
MCF2L-201ENST00000261963 IL17REQ8NFR9 667 aa27.89■■■□□ 2.05
MCF2L-201ENST00000261963 SMARCA5O60264 1052 aaPredicted RBP27.88■■■□□ 2.05
MCF2L-201ENST00000261963 LTV1Q96GA3 475 aaPredicted RBP27.88■■■□□ 2.05
MCF2L-201ENST00000261963 MAP3K5Q99683 1374 aa27.87■■■□□ 2.05
MCF2L-201ENST00000261963 PHF8Q9UPP1 1060 aa27.87■■■□□ 2.05
MCF2L-201ENST00000261963 CD2BP2O95400 341 aaKnown RBP27.86■■■□□ 2.05
MCF2L-201ENST00000261963 STK31Q9BXU1 1019 aa27.86■■■□□ 2.05
MCF2L-201ENST00000261963 APBB1O00213 710 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms