RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 FAM135BQ49AJ0 1406 aa16.25■□□□□ 0.19
PGBD1-201ENST00000259883 ARAP3Q8WWN8 1544 aa16.25■□□□□ 0.19
PGBD1-201ENST00000259883 ST18O60284 1047 aa16.25■□□□□ 0.19
PGBD1-201ENST00000259883 R3HCC1Q9Y3T6 440 aaKnown RBP16.25■□□□□ 0.19
PGBD1-201ENST00000259883 IL1RAPL2Q9NP60 686 aa16.24■□□□□ 0.19
PGBD1-201ENST00000259883 SIGLEC1Q9BZZ2 1709 aa16.24■□□□□ 0.19
PGBD1-201ENST00000259883 EIF4A2Q14240 407 aaKnown RBP16.24■□□□□ 0.19
PGBD1-201ENST00000259883 PUS7Q96PZ0 661 aaKnown RBP16.24■□□□□ 0.19
PGBD1-201ENST00000259883 WASLO00401 505 aaPredicted RBP16.23■□□□□ 0.19
PGBD1-201ENST00000259883 PLCB2Q00722 1185 aa16.23■□□□□ 0.19
PGBD1-201ENST00000259883 NCOA3Q9Y6Q9 1424 aa16.23■□□□□ 0.19
PGBD1-201ENST00000259883 PTPRMP28827 1452 aa16.23■□□□□ 0.19
PGBD1-201ENST00000259883 ARHGAP45Q92619 1136 aa16.23■□□□□ 0.19
PGBD1-201ENST00000259883 TSPYL4Q9UJ04 414 aa16.23■□□□□ 0.19
PGBD1-201ENST00000259883 LMOD3Q0VAK6 560 aa16.23■□□□□ 0.19
PGBD1-201ENST00000259883 KLHL40Q2TBA0 621 aa16.23■□□□□ 0.19
PGBD1-201ENST00000259883 ZNF853P0CG23 659 aa16.22■□□□□ 0.19
PGBD1-201ENST00000259883 C14orf37Q86TY3 774 aa16.22■□□□□ 0.19
PGBD1-201ENST00000259883 OSCARQ8IYS5 282 aa16.22■□□□□ 0.19
PGBD1-201ENST00000259883 ANKRD44Q8N8A2 993 aa16.22■□□□□ 0.19
PGBD1-201ENST00000259883 RIMS2Q9UQ26 1411 aa16.22■□□□□ 0.19
PGBD1-201ENST00000259883 PNPLA6Q8IY17 1366 aa16.22■□□□□ 0.19
PGBD1-201ENST00000259883 FAM13BQ9NYF5 915 aa16.22■□□□□ 0.19
PGBD1-201ENST00000259883 FKBP5Q13451 457 aaPredicted RBP16.21■□□□□ 0.19
PGBD1-201ENST00000259883 GPT2Q8TD30 523 aa16.21■□□□□ 0.19
PGBD1-201ENST00000259883 LMBRD1Q9NUN5 540 aa16.21■□□□□ 0.19
PGBD1-201ENST00000259883 ESF1Q9H501 851 aaKnown RBP16.21■□□□□ 0.19
PGBD1-201ENST00000259883 PALD1Q9ULE6 856 aa16.21■□□□□ 0.19
PGBD1-201ENST00000259883 PTMAP06454 111 aaKnown RBP16.21■□□□□ 0.18
PGBD1-201ENST00000259883 DDX54Q8TDD1 881 aaKnown RBP16.21■□□□□ 0.18
PGBD1-201ENST00000259883 RTF1Q92541 710 aaKnown RBP16.21■□□□□ 0.18
PGBD1-201ENST00000259883 LMTK2Q8IWU2 1503 aa16.2■□□□□ 0.18
PGBD1-201ENST00000259883 NUCB2P80303 420 aa16.2■□□□□ 0.18
PGBD1-201ENST00000259883 CCDC173Q0VFZ6 552 aa16.2■□□□□ 0.18
PGBD1-201ENST00000259883 MYO5BQ9ULV0 1848 aa16.2■□□□□ 0.18
PGBD1-201ENST00000259883 CCDC61Q9Y6R9 512 aa16.19■□□□□ 0.18
PGBD1-201ENST00000259883 ERC2O15083 957 aa16.19■□□□□ 0.18
PGBD1-201ENST00000259883 TMEM63CQ9P1W3 806 aa16.19■□□□□ 0.18
PGBD1-201ENST00000259883 ZDHHC9Q9Y397 364 aa16.19■□□□□ 0.18
PGBD1-201ENST00000259883 NCBP3Q53F19 620 aaKnown RBP16.19■□□□□ 0.18
PGBD1-201ENST00000259883 NUTM1Q86Y26 1132 aa16.19■□□□□ 0.18
PGBD1-201ENST00000259883 SLC26A8Q96RN1 970 aa16.18■□□□□ 0.18
PGBD1-201ENST00000259883 PIK3C2BO00750 1634 aa16.18■□□□□ 0.18
PGBD1-201ENST00000259883 REC8O95072 547 aa16.18■□□□□ 0.18
PGBD1-201ENST00000259883 FAM69CQ0P6D2 419 aa16.18■□□□□ 0.18
PGBD1-201ENST00000259883 ZSCAN30Q86W11 494 aa16.18■□□□□ 0.18
PGBD1-201ENST00000259883 TMX3Q96JJ7 454 aa16.18■□□□□ 0.18
PGBD1-201ENST00000259883 PTCH1Q13635 1447 aa16.18■□□□□ 0.18
PGBD1-201ENST00000259883 CFAP74Q9C0B2 1584 aa16.17■□□□□ 0.18
PGBD1-201ENST00000259883 PDE1AP54750 535 aa16.17■□□□□ 0.18
PGBD1-201ENST00000259883 HECW2Q9P2P5 1572 aa16.17■□□□□ 0.18
PGBD1-201ENST00000259883 PNMA6EA0A0J9YXQ4 647 aa16.17■□□□□ 0.18
PGBD1-201ENST00000259883 MAP2P11137 1827 aaKnown RBP16.17■□□□□ 0.18
PGBD1-201ENST00000259883 MLH3Q9UHC1 1453 aa16.17■□□□□ 0.18
PGBD1-201ENST00000259883 RTL1A6NKG5 1358 aa16.16■□□□□ 0.18
PGBD1-201ENST00000259883 METP08581 1390 aa16.16■□□□□ 0.18
PGBD1-201ENST00000259883 EIF2S2P20042 333 aaKnown RBP16.16■□□□□ 0.18
PGBD1-201ENST00000259883 GLIPR1L2Q4G1C9 344 aa16.16■□□□□ 0.18
PGBD1-201ENST00000259883 UNC5CLQ8IV45 518 aa16.16■□□□□ 0.18
PGBD1-201ENST00000259883 USP32Q8NFA0 1604 aa16.16■□□□□ 0.18
PGBD1-201ENST00000259883 MED14O60244 1454 aa16.16■□□□□ 0.18
PGBD1-201ENST00000259883 ZFYVE9O95405 1425 aa16.16■□□□□ 0.18
PGBD1-201ENST00000259883 RPAP2Q8IXW5 612 aaPredicted RBP16.16■□□□□ 0.18
PGBD1-201ENST00000259883 ZNF830Q96NB3 372 aaPredicted RBP16.16■□□□□ 0.18
PGBD1-201ENST00000259883 USHBP1Q8N6Y0 703 aa16.15■□□□□ 0.18
PGBD1-201ENST00000259883 HMMRO75330 724 aa16.15■□□□□ 0.18
PGBD1-201ENST00000259883 MTHFSDQ2M296 383 aaKnown RBP16.15■□□□□ 0.18
PGBD1-201ENST00000259883 NEURL4Q96JN8 1562 aa16.15■□□□□ 0.18
PGBD1-201ENST00000259883 AMPHP49418 695 aa16.14■□□□□ 0.18
PGBD1-201ENST00000259883 STK31Q9BXU1 1019 aa16.14■□□□□ 0.18
PGBD1-201ENST00000259883 CHMP3Q9Y3E7 222 aa16.14■□□□□ 0.18
PGBD1-201ENST00000259883 PRR36Q9H6K5 1346 aa16.14■□□□□ 0.17
PGBD1-201ENST00000259883 ANXA1P04083 346 aa16.14■□□□□ 0.17
PGBD1-201ENST00000259883 CPA1P15085 419 aa16.14■□□□□ 0.17
PGBD1-201ENST00000259883 DNTTIP2Q5QJE6 756 aaKnown RBP16.14■□□□□ 0.17
PGBD1-201ENST00000259883 BRPF1P55201 1214 aaPredicted RBP16.14■□□□□ 0.17
PGBD1-201ENST00000259883 LRRFIP2Q9Y608 721 aaKnown RBP16.14■□□□□ 0.17
PGBD1-201ENST00000259883 ARHGEF40Q8TER5 1519 aa16.13■□□□□ 0.17
PGBD1-201ENST00000259883 GADD45BO75293 160 aaPredicted RBP16.13■□□□□ 0.17
PGBD1-201ENST00000259883 JARID2Q92833 1246 aaPredicted RBP16.13■□□□□ 0.17
PGBD1-201ENST00000259883 ISY1Q9ULR0 285 aaKnown RBP16.13■□□□□ 0.17
PGBD1-201ENST00000259883 ACEP12821 1306 aa16.13■□□□□ 0.17
PGBD1-201ENST00000259883 PTMSP20962 102 aa16.13■□□□□ 0.17
PGBD1-201ENST00000259883 ZMYND15Q9H091 742 aa16.13■□□□□ 0.17
PGBD1-201ENST00000259883 CHL1O00533 1208 aa16.12■□□□□ 0.17
PGBD1-201ENST00000259883 IL25Q9H293 177 aa16.12■□□□□ 0.17
PGBD1-201ENST00000259883 CPS1P31327 1500 aa16.11■□□□□ 0.17
PGBD1-201ENST00000259883 GNAI2P04899 355 aa16.11■□□□□ 0.17
PGBD1-201ENST00000259883 C17orf53Q8N3J3 647 aaPredicted RBP16.11■□□□□ 0.17
PGBD1-201ENST00000259883 RBM33Q96EV2 1170 aaKnown RBP16.11■□□□□ 0.17
PGBD1-201ENST00000259883 ALKQ9UM73 1620 aa16.11■□□□□ 0.17
PGBD1-201ENST00000259883 ATP10DQ9P241 1426 aa16.11■□□□□ 0.17
PGBD1-201ENST00000259883 MAP3K19Q56UN5 1328 aa16.11■□□□□ 0.17
PGBD1-201ENST00000259883 MX1P20591 662 aa16.11■□□□□ 0.17
PGBD1-201ENST00000259883 NGDNQ8NEJ9 315 aaKnown RBP16.11■□□□□ 0.17
PGBD1-201ENST00000259883 LRRCC1Q9C099 1032 aa16.11■□□□□ 0.17
PGBD1-201ENST00000259883 BCL11BQ9C0K0 894 aaPredicted RBP16.11■□□□□ 0.17
PGBD1-201ENST00000259883 PIK3R4Q99570 1358 aa16.11■□□□□ 0.17
PGBD1-201ENST00000259883 FAM177BA6PVY3 158 aa16.1■□□□□ 0.17
PGBD1-201ENST00000259883 TSC1Q92574 1164 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms