RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 ROCK1Q13464 1354 aa7.97□□□□□ -1.13
PDGFRA-201ENST00000257290 C9orf84Q5VXU9 1444 aa7.97□□□□□ -1.13
PDGFRA-201ENST00000257290 KIF5CO60282 957 aa7.96□□□□□ -1.13
PDGFRA-201ENST00000257290 NPHP1O15259 732 aa7.96□□□□□ -1.13
PDGFRA-201ENST00000257290 PDCD2Q16342 344 aaPredicted RBP7.96□□□□□ -1.13
PDGFRA-201ENST00000257290 SKIDA1Q1XH10 827 aa7.96□□□□□ -1.14
PDGFRA-201ENST00000257290 NBPF8Q3BBV2 869 aa7.96□□□□□ -1.14
PDGFRA-201ENST00000257290 MCTP2Q6DN12 878 aa7.96□□□□□ -1.14
PDGFRA-201ENST00000257290 IQCGQ9H095 443 aaKnown RBP7.96□□□□□ -1.14
PDGFRA-201ENST00000257290 CEP104O60308 925 aa7.96□□□□□ -1.14
PDGFRA-201ENST00000257290 GOLGA2Q08379 1002 aa7.96□□□□□ -1.14
PDGFRA-201ENST00000257290 CYB5RLQ6IPT4 315 aa7.96□□□□□ -1.14
PDGFRA-201ENST00000257290 LUZP1Q86V48 1076 aa7.96□□□□□ -1.14
PDGFRA-201ENST00000257290 ZNF397Q8NF99 534 aaPredicted RBP7.96□□□□□ -1.14
PDGFRA-201ENST00000257290 PTPN23Q9H3S7 1636 aa7.96□□□□□ -1.14
PDGFRA-201ENST00000257290 MBD3O95983 291 aa7.96□□□□□ -1.14
PDGFRA-201ENST00000257290 GIGYF2Q6Y7W6 1299 aaKnown RBP7.95□□□□□ -1.14
PDGFRA-201ENST00000257290 CHCHD3Q9NX63 227 aaKnown RBP7.95□□□□□ -1.14
PDGFRA-201ENST00000257290 U2AF2P26368 475 aaKnown RBP eCLIP7.95□□□□□ -1.14
PDGFRA-201ENST00000257290 MCM6Q14566 821 aa7.95□□□□□ -1.14
PDGFRA-201ENST00000257290 EXOC8Q8IYI6 725 aa7.95□□□□□ -1.14
PDGFRA-201ENST00000257290 SENP3Q9H4L4 574 aaPredicted RBP7.95□□□□□ -1.14
PDGFRA-201ENST00000257290 PSMD2Q13200 908 aa7.95□□□□□ -1.14
PDGFRA-201ENST00000257290 EXOC6Q8TAG9 804 aa7.94□□□□□ -1.14
PDGFRA-201ENST00000257290 UBXN4Q92575 508 aa7.94□□□□□ -1.14
PDGFRA-201ENST00000257290 UGGT2Q9NYU1 1516 aa7.94□□□□□ -1.14
PDGFRA-201ENST00000257290 ABCA5Q8WWZ7 1642 aa7.94□□□□□ -1.14
PDGFRA-201ENST00000257290 LRRC23Q53EV4 343 aaPredicted RBP7.94□□□□□ -1.14
PDGFRA-201ENST00000257290 DNAI2Q9GZS0 605 aa7.94□□□□□ -1.14
PDGFRA-201ENST00000257290 RAPGEF6Q8TEU7 1601 aa7.94□□□□□ -1.14
PDGFRA-201ENST00000257290 FOXD4L1Q9NU39 408 aa7.94□□□□□ -1.14
PDGFRA-201ENST00000257290 MRFAP1Q9Y605 127 aa7.94□□□□□ -1.14
PDGFRA-201ENST00000257290 RMI1Q9H9A7 625 aa7.94□□□□□ -1.14
PDGFRA-201ENST00000257290 PBRM1Q86U86 1689 aa7.94□□□□□ -1.14
PDGFRA-201ENST00000257290 CAMSAP2Q08AD1 1489 aa7.94□□□□□ -1.14
PDGFRA-201ENST00000257290 PLB1Q6P1J6 1458 aa7.94□□□□□ -1.14
PDGFRA-201ENST00000257290 PRPF40AO75400 957 aaKnown RBP7.94□□□□□ -1.14
PDGFRA-201ENST00000257290 MMP14P50281 582 aa7.94□□□□□ -1.14
PDGFRA-201ENST00000257290 RRP1P56182 461 aaKnown RBP7.94□□□□□ -1.14
PDGFRA-201ENST00000257290 NEXNQ0ZGT2 675 aa7.94□□□□□ -1.14
PDGFRA-201ENST00000257290 TRAF1Q13077 416 aa7.94□□□□□ -1.14
PDGFRA-201ENST00000257290 TACO1Q9BSH4 297 aaKnown RBP7.94□□□□□ -1.14
PDGFRA-201ENST00000257290 PAXBP1Q9Y5B6 917 aa7.94□□□□□ -1.14
PDGFRA-201ENST00000257290 EIF4G3O43432 1585 aaKnown RBP7.93□□□□□ -1.14
PDGFRA-201ENST00000257290 GUCY2CP25092 1073 aa7.93□□□□□ -1.14
PDGFRA-201ENST00000257290 SEPT6Q14141 434 aa7.93□□□□□ -1.14
PDGFRA-201ENST00000257290 ARMC9Q7Z3E5 817 aa7.93□□□□□ -1.14
PDGFRA-201ENST00000257290 KIF18AQ8NI77 898 aa7.93□□□□□ -1.14
PDGFRA-201ENST00000257290 CT47B1P0C2W7 299 aaPredicted RBP7.93□□□□□ -1.14
PDGFRA-201ENST00000257290 MCTP1Q6DN14 999 aa7.93□□□□□ -1.14
PDGFRA-201ENST00000257290 NOL7Q9UMY1 257 aaKnown RBP7.93□□□□□ -1.14
PDGFRA-201ENST00000257290 CEP57Q86XR8 500 aa7.93□□□□□ -1.14
PDGFRA-201ENST00000257290 KIAA0556O60303 1618 aa7.92□□□□□ -1.14
PDGFRA-201ENST00000257290 SH3BP5O60239 455 aa7.92□□□□□ -1.14
PDGFRA-201ENST00000257290 HDGFL1Q5TGJ6 251 aa7.92□□□□□ -1.14
PDGFRA-201ENST00000257290 NBPF10Q6P3W6 841 aaKnown RBP7.92□□□□□ -1.14
PDGFRA-201ENST00000257290 ZSCAN20P17040 1043 aaPredicted RBP7.92□□□□□ -1.14
PDGFRA-201ENST00000257290 SEPT7Q16181 437 aaKnown RBP7.92□□□□□ -1.14
PDGFRA-201ENST00000257290 FOXD4L5Q5VV16 416 aaPredicted RBP7.92□□□□□ -1.14
PDGFRA-201ENST00000257290 FOXD4L4Q8WXT5 416 aaPredicted RBP7.92□□□□□ -1.14
PDGFRA-201ENST00000257290 RBM33Q96EV2 1170 aaKnown RBP7.92□□□□□ -1.14
PDGFRA-201ENST00000257290 TRIM6Q9C030 488 aaPredicted RBP7.92□□□□□ -1.14
PDGFRA-201ENST00000257290 CIZ1Q9ULV3 898 aaPredicted RBP7.92□□□□□ -1.14
PDGFRA-201ENST00000257290 ABCD1P33897 745 aa7.92□□□□□ -1.14
PDGFRA-201ENST00000257290 BRPF1P55201 1214 aaPredicted RBP7.92□□□□□ -1.14
PDGFRA-201ENST00000257290 NEDD9Q14511 834 aa7.92□□□□□ -1.14
PDGFRA-201ENST00000257290 DNAJC21Q5F1R6 531 aaKnown RBP7.92□□□□□ -1.14
PDGFRA-201ENST00000257290 TMCO4Q5TGY1 634 aa7.92□□□□□ -1.14
PDGFRA-201ENST00000257290 SPTY2D1Q68D10 685 aaPredicted RBP7.92□□□□□ -1.14
PDGFRA-201ENST00000257290 RTF1Q92541 710 aaKnown RBP7.92□□□□□ -1.14
PDGFRA-201ENST00000257290 NOLC1Q14978 699 aaKnown RBP eCLIP7.92□□□□□ -1.14
PDGFRA-201ENST00000257290 HDGFL2Q7Z4V5 671 aaPredicted RBP7.92□□□□□ -1.14
PDGFRA-201ENST00000257290 CCDC141Q6ZP82 1450 aa7.92□□□□□ -1.14
PDGFRA-201ENST00000257290 FAM69CQ0P6D2 419 aa7.92□□□□□ -1.14
PDGFRA-201ENST00000257290 FAM177A1Q8N128 213 aaPredicted RBP7.92□□□□□ -1.14
PDGFRA-201ENST00000257290 CFAP43Q8NDM7 1665 aa7.91□□□□□ -1.14
PDGFRA-201ENST00000257290 SETDB1Q15047 1291 aa7.91□□□□□ -1.14
PDGFRA-201ENST00000257290 POTEDQ86YR6 584 aa7.91□□□□□ -1.14
PDGFRA-201ENST00000257290 KIAA1107Q9UPP5 1409 aa7.91□□□□□ -1.14
PDGFRA-201ENST00000257290 CCDC102AQ96A19 550 aa7.91□□□□□ -1.14
PDGFRA-201ENST00000257290 MSL3Q8N5Y2 521 aaKnown RBP7.91□□□□□ -1.14
PDGFRA-201ENST00000257290 PMFBP1Q8TBY8 1022 aa7.91□□□□□ -1.14
PDGFRA-201ENST00000257290 FAM212AQ96EL1 285 aa7.91□□□□□ -1.14
PDGFRA-201ENST00000257290 SMC3Q9UQE7 1217 aa7.91□□□□□ -1.14
PDGFRA-201ENST00000257290 USP47Q96K76 1375 aa7.91□□□□□ -1.14
PDGFRA-201ENST00000257290 ANKRD18BA2A2Z9 1011 aa7.91□□□□□ -1.14
PDGFRA-201ENST00000257290 TRIM29Q14134 588 aa7.91□□□□□ -1.14
PDGFRA-201ENST00000257290 E2F4Q16254 413 aa7.91□□□□□ -1.14
PDGFRA-201ENST00000257290 ZSCAN26Q16670 478 aa7.91□□□□□ -1.14
PDGFRA-201ENST00000257290 MORC1Q86VD1 984 aa7.91□□□□□ -1.14
PDGFRA-201ENST00000257290 CCDC65Q8IXS2 484 aa7.91□□□□□ -1.14
PDGFRA-201ENST00000257290 RWDD2BP57060 319 aa7.91□□□□□ -1.14
PDGFRA-201ENST00000257290 PDE3BQ13370 1112 aa7.91□□□□□ -1.14
PDGFRA-201ENST00000257290 ARMC2Q8NEN0 867 aa7.91□□□□□ -1.14
PDGFRA-201ENST00000257290 CCDC114Q96M63 670 aa7.91□□□□□ -1.14
PDGFRA-201ENST00000257290 MED4Q9NPJ6 270 aa7.91□□□□□ -1.14
PDGFRA-201ENST00000257290 FEZ2Q9UHY8 353 aaPredicted RBP7.91□□□□□ -1.14
PDGFRA-201ENST00000257290 NBPF7P0C2Y1 421 aaPredicted RBP7.9□□□□□ -1.14
PDGFRA-201ENST00000257290 CAPN2P17655 700 aa7.9□□□□□ -1.14
PDGFRA-201ENST00000257290 RNF217Q8TC41 542 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms