RNA–Protein interactions for RNA: ENST00000254810.8

H3F3B-201, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3B, Length 2,705 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-201ENST00000254810 CALD1Q05682 793 aaKnown RBP16.52■□□□□ 0.23
H3F3B-201ENST00000254810 CEP85Q6P2H3 762 aa16.52■□□□□ 0.23
H3F3B-201ENST00000254810 ANKRD44Q8N8A2 993 aa16.52■□□□□ 0.23
H3F3B-201ENST00000254810 SLC52A1Q9NWF4 448 aa16.52■□□□□ 0.23
H3F3B-201ENST00000254810 FOXD4L5Q5VV16 416 aaPredicted RBP16.51■□□□□ 0.23
H3F3B-201ENST00000254810 FOXD4L4Q8WXT5 416 aaPredicted RBP16.51■□□□□ 0.23
H3F3B-201ENST00000254810 PKNOX2Q96KN3 472 aa16.51■□□□□ 0.23
H3F3B-201ENST00000254810 NCKAP5LQ9HCH0 1330 aa16.51■□□□□ 0.23
H3F3B-201ENST00000254810 INTS3Q68E01 1043 aaKnown RBP16.5■□□□□ 0.23
H3F3B-201ENST00000254810 PDLIM2Q96JY6 352 aa16.5■□□□□ 0.23
H3F3B-201ENST00000254810 MEIS3Q99687 375 aa16.5■□□□□ 0.23
H3F3B-201ENST00000254810 TMEM63CQ9P1W3 806 aa16.5■□□□□ 0.23
H3F3B-201ENST00000254810 MSH6P52701 1360 aa16.5■□□□□ 0.23
H3F3B-201ENST00000254810 RBM10P98175 930 aaKnown RBP16.49■□□□□ 0.23
H3F3B-201ENST00000254810 AEBP1Q8IUX7 1158 aa16.49■□□□□ 0.23
H3F3B-201ENST00000254810 PREX1Q8TCU6 1659 aa16.49■□□□□ 0.23
H3F3B-201ENST00000254810 MSNP26038 577 aaKnown RBP16.48■□□□□ 0.23
H3F3B-201ENST00000254810 XPCQ01831 940 aaPredicted RBP16.48■□□□□ 0.23
H3F3B-201ENST00000254810 ANP32BQ92688 251 aaKnown RBP16.48■□□□□ 0.23
H3F3B-201ENST00000254810 RTL1A6NKG5 1358 aa16.48■□□□□ 0.23
H3F3B-201ENST00000254810 KIF24Q5T7B8 1368 aa16.47■□□□□ 0.23
H3F3B-201ENST00000254810 ATP7BP35670 1465 aa16.47■□□□□ 0.23
H3F3B-201ENST00000254810 CDK12Q9NYV4 1490 aaPredicted RBP16.47■□□□□ 0.23
H3F3B-201ENST00000254810 TSHZ3Q63HK5 1081 aa16.47■□□□□ 0.23
H3F3B-201ENST00000254810 SYCE3A1L190 88 aa16.47■□□□□ 0.23
H3F3B-201ENST00000254810 NOL7Q9UMY1 257 aaKnown RBP16.47■□□□□ 0.23
H3F3B-201ENST00000254810 R3HCC1Q9Y3T6 440 aaKnown RBP16.47■□□□□ 0.23
H3F3B-201ENST00000254810 CPS1P31327 1500 aa16.46■□□□□ 0.23
H3F3B-201ENST00000254810 CPSF1Q10570 1443 aaKnown RBP16.45■□□□□ 0.22
H3F3B-201ENST00000254810 MCM10Q7L590 875 aa16.45■□□□□ 0.22
H3F3B-201ENST00000254810 CWC22Q9HCG8 908 aaKnown RBP16.45■□□□□ 0.22
H3F3B-201ENST00000254810 ST18O60284 1047 aa16.45■□□□□ 0.22
H3F3B-201ENST00000254810 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.44■□□□□ 0.22
H3F3B-201ENST00000254810 RPAP2Q8IXW5 612 aaPredicted RBP16.44■□□□□ 0.22
H3F3B-201ENST00000254810 NPM1P06748 294 aaKnown RBP eCLIP16.44■□□□□ 0.22
H3F3B-201ENST00000254810 PDCL3Q9H2J4 239 aa16.44■□□□□ 0.22
H3F3B-201ENST00000254810 LMOD3Q0VAK6 560 aa16.43■□□□□ 0.22
H3F3B-201ENST00000254810 ZNF500O60304 480 aaPredicted RBP16.43■□□□□ 0.22
H3F3B-201ENST00000254810 LRSAM1Q6UWE0 723 aa16.43■□□□□ 0.22
H3F3B-201ENST00000254810 RNF214Q8ND24 703 aa16.43■□□□□ 0.22
H3F3B-201ENST00000254810 PALD1Q9ULE6 856 aa16.43■□□□□ 0.22
H3F3B-201ENST00000254810 EDC4Q6P2E9 1401 aaKnown RBP16.42■□□□□ 0.22
H3F3B-201ENST00000254810 ERC2O15083 957 aa16.42■□□□□ 0.22
H3F3B-201ENST00000254810 HS1BP3Q53T59 392 aa16.42■□□□□ 0.22
H3F3B-201ENST00000254810 TMX3Q96JJ7 454 aa16.42■□□□□ 0.22
H3F3B-201ENST00000254810 MIS18AQ9NYP9 233 aa16.42■□□□□ 0.22
H3F3B-201ENST00000254810 NOL8Q76FK4 1167 aaKnown RBP16.41■□□□□ 0.22
H3F3B-201ENST00000254810 G2E3Q7L622 706 aa16.41■□□□□ 0.22
H3F3B-201ENST00000254810 AATKQ6ZMQ8 1374 aa16.41■□□□□ 0.22
H3F3B-201ENST00000254810 RIMBP3CA6NJZ7 1639 aa16.41■□□□□ 0.22
H3F3B-201ENST00000254810 RIMBP3BA6NNM3 1639 aa16.41■□□□□ 0.22
H3F3B-201ENST00000254810 RIMBP3Q9UFD9 1639 aa16.41■□□□□ 0.22
H3F3B-201ENST00000254810 F6X3S4 739 aa16.41■□□□□ 0.22
H3F3B-201ENST00000254810 CHL1O00533 1208 aa16.41■□□□□ 0.22
H3F3B-201ENST00000254810 NEK4P51957 841 aa16.41■□□□□ 0.22
H3F3B-201ENST00000254810 REC8O95072 547 aa16.4■□□□□ 0.22
H3F3B-201ENST00000254810 PDE1AP54750 535 aa16.4■□□□□ 0.22
H3F3B-201ENST00000254810 SULT6B1Q6IMI4 303 aa16.4■□□□□ 0.22
H3F3B-201ENST00000254810 CASC1Q6TDU7 716 aa16.4■□□□□ 0.22
H3F3B-201ENST00000254810 ZKSCAN5Q9Y2L8 839 aa16.4■□□□□ 0.22
H3F3B-201ENST00000254810 EIF4A2Q14240 407 aaKnown RBP16.39■□□□□ 0.22
H3F3B-201ENST00000254810 FAM13BQ9NYF5 915 aa16.39■□□□□ 0.22
H3F3B-201ENST00000254810 WASLO00401 505 aaPredicted RBP16.39■□□□□ 0.21
H3F3B-201ENST00000254810 FOXD4L6Q3SYB3 417 aaPredicted RBP16.39■□□□□ 0.21
H3F3B-201ENST00000254810 FOXD4L3Q6VB84 417 aaPredicted RBP16.39■□□□□ 0.21
H3F3B-201ENST00000254810 COG3Q96JB2 828 aa16.39■□□□□ 0.21
H3F3B-201ENST00000254810 SLC4A2P04920 1241 aa16.39■□□□□ 0.21
H3F3B-201ENST00000254810 STAG3Q9UJ98 1225 aa16.39■□□□□ 0.21
H3F3B-201ENST00000254810 EXOC6BQ9Y2D4 811 aa16.39■□□□□ 0.21
H3F3B-201ENST00000254810 SETD1AO15047 1707 aaKnown RBP16.38■□□□□ 0.21
H3F3B-201ENST00000254810 RICTORQ6R327 1708 aa16.38■□□□□ 0.21
H3F3B-201ENST00000254810 BRD1O95696 1058 aa16.38■□□□□ 0.21
H3F3B-201ENST00000254810 GDPD2Q9HCC8 539 aa16.38■□□□□ 0.21
H3F3B-201ENST00000254810 DLC1Q96QB1 1528 aa16.38■□□□□ 0.21
H3F3B-201ENST00000254810 UQCRHLA0A096LP55 91 aa16.37■□□□□ 0.21
H3F3B-201ENST00000254810 UQCRHP07919 91 aa16.37■□□□□ 0.21
H3F3B-201ENST00000254810 SLC4A10Q6U841 1118 aa16.37■□□□□ 0.21
H3F3B-201ENST00000254810 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.37■□□□□ 0.21
H3F3B-201ENST00000254810 NUDT16Q96DE0 195 aaKnown RBP16.37■□□□□ 0.21
H3F3B-201ENST00000254810 NEO1Q92859 1461 aa16.37■□□□□ 0.21
H3F3B-201ENST00000254810 TERF1P54274 439 aa16.37■□□□□ 0.21
H3F3B-201ENST00000254810 OSBPL3Q9H4L5 887 aa16.37■□□□□ 0.21
H3F3B-201ENST00000254810 GADD45BO75293 160 aaPredicted RBP16.36■□□□□ 0.21
H3F3B-201ENST00000254810 TXNDC2Q86VQ3 553 aa16.36■□□□□ 0.21
H3F3B-201ENST00000254810 MPNDQ8N594 471 aa16.36■□□□□ 0.21
H3F3B-201ENST00000254810 SALL3Q9BXA9 1300 aa16.36■□□□□ 0.21
H3F3B-201ENST00000254810 ESYT1Q9BSJ8 1104 aa16.36■□□□□ 0.21
H3F3B-201ENST00000254810 IL25Q9H293 177 aa16.36■□□□□ 0.21
H3F3B-201ENST00000254810 ZBTB7CA1YPR0 619 aa16.35■□□□□ 0.21
H3F3B-201ENST00000254810 FOXO3O43524 673 aa16.35■□□□□ 0.21
H3F3B-201ENST00000254810 PTPRCP08575 1304 aa16.35■□□□□ 0.21
H3F3B-201ENST00000254810 CUL4AQ13619 759 aa16.35■□□□□ 0.21
H3F3B-201ENST00000254810 METP08581 1390 aa16.35■□□□□ 0.21
H3F3B-201ENST00000254810 TUBGCP6Q96RT7 1819 aa16.34■□□□□ 0.21
H3F3B-201ENST00000254810 CRB1P82279 1406 aa16.34■□□□□ 0.21
H3F3B-201ENST00000254810 KIAA0232Q92628 1395 aa16.34■□□□□ 0.21
H3F3B-201ENST00000254810 UNC5CLQ8IV45 518 aa16.34■□□□□ 0.21
H3F3B-201ENST00000254810 JARID2Q92833 1246 aaPredicted RBP16.34■□□□□ 0.21
H3F3B-201ENST00000254810 ARID3AQ99856 593 aa16.34■□□□□ 0.21
H3F3B-201ENST00000254810 UPF3BQ9BZI7 483 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms