RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 MYOM1P52179 1685 aa3.24□□□□□ -1.89
PRKD3-201ENST00000234179 NFAT5O94916 1531 aa3.24□□□□□ -1.89
PRKD3-201ENST00000234179 ATP10DQ9P241 1426 aa3.24□□□□□ -1.89
PRKD3-201ENST00000234179 FSTL1Q12841 308 aa3.24□□□□□ -1.89
PRKD3-201ENST00000234179 IP6K1Q92551 441 aa3.24□□□□□ -1.89
PRKD3-201ENST00000234179 RBM46Q8TBY0 533 aaKnown RBP3.23□□□□□ -1.89
PRKD3-201ENST00000234179 ADCY9O60503 1353 aa3.23□□□□□ -1.89
PRKD3-201ENST00000234179 SBF2Q86WG5 1849 aa3.23□□□□□ -1.89
PRKD3-201ENST00000234179 COL18A1P39060 1754 aa3.23□□□□□ -1.89
PRKD3-201ENST00000234179 MAP3K19Q56UN5 1328 aa3.23□□□□□ -1.89
PRKD3-201ENST00000234179 WASHC2AQ641Q2 1341 aa3.23□□□□□ -1.89
PRKD3-201ENST00000234179 ZBTB7CA1YPR0 619 aa3.23□□□□□ -1.89
PRKD3-201ENST00000234179 SSFA2P28290 1259 aa3.23□□□□□ -1.89
PRKD3-201ENST00000234179 RAPGEF4Q8WZA2 1011 aa3.23□□□□□ -1.89
PRKD3-201ENST00000234179 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.23□□□□□ -1.892e-6■■■□□ 16.3
PRKD3-201ENST00000234179 CCNL1Q9UK58 526 aaPredicted RBP3.23□□□□□ -1.89
PRKD3-201ENST00000234179 TATP17735 454 aaPredicted RBP3.23□□□□□ -1.89
PRKD3-201ENST00000234179 NUTM2GQ5VZR2 741 aa3.23□□□□□ -1.89
PRKD3-201ENST00000234179 ANKRD24Q8TF21 1146 aa3.23□□□□□ -1.89
PRKD3-201ENST00000234179 PCDH11XQ9BZA7 1347 aa3.23□□□□□ -1.89
PRKD3-201ENST00000234179 PCDH11YQ9BZA8 1340 aa3.23□□□□□ -1.89
PRKD3-201ENST00000234179 HSP90AB1P08238 724 aaKnown RBP3.23□□□□□ -1.89
PRKD3-201ENST00000234179 TGFB2P61812 414 aa3.23□□□□□ -1.89
PRKD3-201ENST00000234179 ZCRB1Q8TBF4 217 aaKnown RBP3.23□□□□□ -1.89
PRKD3-201ENST00000234179 TOMM70O94826 608 aa3.22□□□□□ -1.89
PRKD3-201ENST00000234179 C16orf71Q8IYS4 520 aaPredicted RBP3.22□□□□□ -1.89
PRKD3-201ENST00000234179 COG3Q96JB2 828 aa3.22□□□□□ -1.89
PRKD3-201ENST00000234179 CICQ96RK0 1608 aaPredicted RBP3.22□□□□□ -1.89
PRKD3-201ENST00000234179 KDM2BQ8NHM5 1336 aa3.22□□□□□ -1.89
PRKD3-201ENST00000234179 PNPLA7Q6ZV29 1317 aa3.22□□□□□ -1.89
PRKD3-201ENST00000234179 NLGN1Q8N2Q7 840 aa3.22□□□□□ -1.89
PRKD3-201ENST00000234179 AK7Q96M32 723 aa3.22□□□□□ -1.89
PRKD3-201ENST00000234179 CABP2Q9NPB3 220 aa3.22□□□□□ -1.89
PRKD3-201ENST00000234179 ROCK2O75116 1388 aaKnown RBP3.22□□□□□ -1.89
PRKD3-201ENST00000234179 CD163L1Q9NR16 1453 aa3.22□□□□□ -1.89
PRKD3-201ENST00000234179 CCDC87Q9NVE4 849 aa3.21□□□□□ -1.89
PRKD3-201ENST00000234179 PIK3C2AO00443 1686 aa3.21□□□□□ -1.89
PRKD3-201ENST00000234179 AMPHP49418 695 aa3.21□□□□□ -1.9
PRKD3-201ENST00000234179 PELP1Q8IZL8 1130 aaKnown RBP3.21□□□□□ -1.9
PRKD3-201ENST00000234179 SPG7Q9UQ90 795 aa3.21□□□□□ -1.9
PRKD3-201ENST00000234179 CLCN6P51797 869 aa3.21□□□□□ -1.9
PRKD3-201ENST00000234179 KLHL34Q8N239 644 aa3.21□□□□□ -1.9
PRKD3-201ENST00000234179 MON2Q7Z3U7 1717 aa3.21□□□□□ -1.9
PRKD3-201ENST00000234179 RC3H1Q5TC82 1133 aaKnown RBP3.21□□□□□ -1.9
PRKD3-201ENST00000234179 JMYQ8N9B5 988 aa3.21□□□□□ -1.9
PRKD3-201ENST00000234179 ZNF827Q17R98 1081 aa3.2□□□□□ -1.9
PRKD3-201ENST00000234179 PCDH10Q9P2E7 1040 aa3.2□□□□□ -1.9
PRKD3-201ENST00000234179 INSRP06213 1382 aa3.2□□□□□ -1.9
PRKD3-201ENST00000234179 FLT4P35916 1363 aa3.2□□□□□ -1.9
PRKD3-201ENST00000234179 NKX1-1Q15270 411 aaPredicted RBP3.2□□□□□ -1.9
PRKD3-201ENST00000234179 AXIN2Q9Y2T1 843 aa3.2□□□□□ -1.9
PRKD3-201ENST00000234179 PALLDQ8WX93 1383 aa3.2□□□□□ -1.9
PRKD3-201ENST00000234179 MKRN4PQ13434 485 aaPredicted RBP3.2□□□□□ -1.9
PRKD3-201ENST00000234179 SMC1BQ8NDV3 1235 aa3.2□□□□□ -1.9
PRKD3-201ENST00000234179 BTAF1O14981 1849 aa3.2□□□□□ -1.9
PRKD3-201ENST00000234179 SHANK3Q9BYB0 1731 aa3.2□□□□□ -1.9
PRKD3-201ENST00000234179 PRIM1P49642 420 aaKnown RBP3.19□□□□□ -1.9
PRKD3-201ENST00000234179 PRELPP51888 382 aa3.19□□□□□ -1.9
PRKD3-201ENST00000234179 ACSBG1Q96GR2 724 aa3.19□□□□□ -1.9
PRKD3-201ENST00000234179 IGSF1Q8N6C5 1336 aa3.19□□□□□ -1.9
PRKD3-201ENST00000234179 SOGA3Q5TF21 947 aa3.19□□□□□ -1.9
PRKD3-201ENST00000234179 DDX54Q8TDD1 881 aaKnown RBP3.19□□□□□ -1.9
PRKD3-201ENST00000234179 LY75O60449 1722 aa3.19□□□□□ -1.9
PRKD3-201ENST00000234179 HOXC9P31274 260 aa3.19□□□□□ -1.9
PRKD3-201ENST00000234179 COL23A1Q86Y22 540 aaPredicted RBP3.19□□□□□ -1.9
PRKD3-201ENST00000234179 TMC1Q8TDI8 760 aa3.19□□□□□ -1.9
PRKD3-201ENST00000234179 SYTL4Q96C24 671 aaPredicted RBP3.19□□□□□ -1.9
PRKD3-201ENST00000234179 KLRG1Q96E93 195 aa3.19□□□□□ -1.9
PRKD3-201ENST00000234179 CNTNAP4Q9C0A0 1308 aa3.19□□□□□ -1.9
PRKD3-201ENST00000234179 PXDNLA1KZ92 1463 aa3.19□□□□□ -1.9
PRKD3-201ENST00000234179 NBPF1Q3BBV0 1214 aa3.18□□□□□ -1.9
PRKD3-201ENST00000234179 CARD11Q9BXL7 1154 aa3.18□□□□□ -1.9
PRKD3-201ENST00000234179 LRRC4BQ9NT99 713 aa3.18□□□□□ -1.9
PRKD3-201ENST00000234179 PARP3Q9Y6F1 533 aa3.18□□□□□ -1.9
PRKD3-201ENST00000234179 ERVV-2B6SEH9 535 aa3.18□□□□□ -1.9
PRKD3-201ENST00000234179 KIF3CO14782 793 aa3.18□□□□□ -1.9
PRKD3-201ENST00000234179 TMF1P82094 1093 aa3.18□□□□□ -1.9
PRKD3-201ENST00000234179 NCAPD2Q15021 1401 aa3.18□□□□□ -1.9
PRKD3-201ENST00000234179 TONSLQ96HA7 1378 aa3.18□□□□□ -1.9
PRKD3-201ENST00000234179 TMOD3Q9NYL9 352 aa3.18□□□□□ -1.9
PRKD3-201ENST00000234179 TIMELESSQ9UNS1 1208 aa3.18□□□□□ -1.9
PRKD3-201ENST00000234179 RTCBQ9Y3I0 505 aaKnown RBP3.18□□□□□ -1.9
PRKD3-201ENST00000234179 A0A087WZG4 1122 aa3.18□□□□□ -1.9
PRKD3-201ENST00000234179 RGL2O15211 777 aa3.18□□□□□ -1.9
PRKD3-201ENST00000234179 AMOTQ4VCS5 1084 aa3.18□□□□□ -1.9
PRKD3-201ENST00000234179 IFNL2Q8IZJ0 200 aa3.18□□□□□ -1.9
PRKD3-201ENST00000234179 L3MBTL2Q969R5 705 aa3.18□□□□□ -1.9
PRKD3-201ENST00000234179 ZNF831Q5JPB2 1677 aa3.18□□□□□ -1.9
PRKD3-201ENST00000234179 TRAPPC3LQ5T215 181 aa3.18□□□□□ -1.9
PRKD3-201ENST00000234179 TNS4Q8IZW8 715 aa3.18□□□□□ -1.9
PRKD3-201ENST00000234179 A0A1W2PP64 1363 aa3.18□□□□□ -1.9
PRKD3-201ENST00000234179 PPARGC1BQ86YN6 1023 aaKnown RBP3.18□□□□□ -1.9
PRKD3-201ENST00000234179 PIM2Q9P1W9 311 aa3.18□□□□□ -1.9
PRKD3-201ENST00000234179 YBX3P16989 372 aaKnown RBP eCLIP3.17□□□□□ -1.97e-8■■■■□ 21.5
PRKD3-201ENST00000234179 NME9Q86XW9 330 aa3.17□□□□□ -1.9
PRKD3-201ENST00000234179 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.17□□□□□ -1.9
PRKD3-201ENST00000234179 NLGN2Q8NFZ4 835 aa3.17□□□□□ -1.9
PRKD3-201ENST00000234179 PRDM10Q9NQV6 1147 aa3.17□□□□□ -1.9
PRKD3-201ENST00000234179 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.17□□□□□ -1.9
PRKD3-201ENST00000234179 DALRD3Q5D0E6 543 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms