RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 EFCAB5A4FU69 1503 aa15.78■□□□□ 0.12
NEK4-201ENST00000233027 SYCP1Q15431 976 aa15.77■□□□□ 0.12
NEK4-201ENST00000233027 CEP57L1Q8IYX8 460 aa15.77■□□□□ 0.11
NEK4-201ENST00000233027 CENPHQ9H3R5 247 aa15.77■□□□□ 0.11
NEK4-201ENST00000233027 CFAP45Q9UL16 551 aa15.77■□□□□ 0.11
NEK4-201ENST00000233027 NFE2L2Q16236 605 aa15.77■□□□□ 0.11
NEK4-201ENST00000233027 CCDC85AQ96PX6 553 aaPredicted RBP15.77■□□□□ 0.11
NEK4-201ENST00000233027 MCM10Q7L590 875 aa15.76■□□□□ 0.11
NEK4-201ENST00000233027 SSFA2P28290 1259 aa15.76■□□□□ 0.11
NEK4-201ENST00000233027 MAP3K11Q16584 847 aa15.76■□□□□ 0.11
NEK4-201ENST00000233027 TMEM132AQ24JP5 1023 aa15.76■□□□□ 0.11
NEK4-201ENST00000233027 CCDC57Q2TAC2 916 aa15.76■□□□□ 0.11
NEK4-201ENST00000233027 ZSCAN30Q86W11 494 aa15.76■□□□□ 0.11
NEK4-201ENST00000233027 PPP6R1Q9UPN7 881 aa15.76■□□□□ 0.11
NEK4-201ENST00000233027 ANKRD30BQ9BXX2 1392 aa15.76■□□□□ 0.11
NEK4-201ENST00000233027 PLCD4Q9BRC7 762 aa15.76■□□□□ 0.11
NEK4-201ENST00000233027 PRDM10Q9NQV6 1147 aa15.76■□□□□ 0.11
NEK4-201ENST00000233027 NACAP1Q9BZK3 213 aa15.76■□□□□ 0.11
NEK4-201ENST00000233027 GRIN2BQ13224 1484 aa15.76■□□□□ 0.11
NEK4-201ENST00000233027 STIM1Q13586 685 aa15.75■□□□□ 0.11
NEK4-201ENST00000233027 RPAP2Q8IXW5 612 aaPredicted RBP15.75■□□□□ 0.11
NEK4-201ENST00000233027 ZNF692Q9BU19 519 aaPredicted RBP15.75■□□□□ 0.11
NEK4-201ENST00000233027 RARSP54136 660 aaKnown RBP15.75■□□□□ 0.11
NEK4-201ENST00000233027 GNL3LQ9NVN8 582 aaKnown RBP15.75■□□□□ 0.11
NEK4-201ENST00000233027 FCHSD2O94868 740 aa15.75■□□□□ 0.11
NEK4-201ENST00000233027 CALRP27797 417 aaKnown RBP15.75■□□□□ 0.11
NEK4-201ENST00000233027 PRPF40BQ6NWY9 871 aaKnown RBP15.75■□□□□ 0.11
NEK4-201ENST00000233027 GOLGA6L10A6NI86 522 aa15.74■□□□□ 0.11
NEK4-201ENST00000233027 PDCL2Q8N4E4 241 aa15.74■□□□□ 0.11
NEK4-201ENST00000233027 SSH1Q8WYL5 1049 aa15.74■□□□□ 0.11
NEK4-201ENST00000233027 RRP9O43818 475 aaKnown RBP15.74■□□□□ 0.11
NEK4-201ENST00000233027 MX1P20591 662 aa15.74■□□□□ 0.11
NEK4-201ENST00000233027 XPCQ01831 940 aaPredicted RBP15.74■□□□□ 0.11
NEK4-201ENST00000233027 LARP6Q9BRS8 491 aaKnown RBP15.74■□□□□ 0.11
NEK4-201ENST00000233027 TBC1D2Q9BYX2 928 aa15.73■□□□□ 0.11
NEK4-201ENST00000233027 NKTRP30414 1462 aaKnown RBP15.73■□□□□ 0.11
NEK4-201ENST00000233027 TDO2P48775 406 aa15.73■□□□□ 0.11
NEK4-201ENST00000233027 ERLIN1O75477 346 aa15.73■□□□□ 0.11
NEK4-201ENST00000233027 HSP90AB3PQ58FF7 597 aa15.73■□□□□ 0.11
NEK4-201ENST00000233027 NOL7Q9UMY1 257 aaKnown RBP15.73■□□□□ 0.11
NEK4-201ENST00000233027 CDK13Q14004 1512 aaKnown RBP15.73■□□□□ 0.11
NEK4-201ENST00000233027 CCDC102AQ96A19 550 aa15.73■□□□□ 0.11
NEK4-201ENST00000233027 CBX1P83916 185 aa15.72■□□□□ 0.11
NEK4-201ENST00000233027 DHX8Q14562 1220 aaKnown RBP15.72■□□□□ 0.11
NEK4-201ENST00000233027 CFAP100Q494V2 611 aa15.72■□□□□ 0.11
NEK4-201ENST00000233027 DUSP27Q5VZP5 1158 aa15.72■□□□□ 0.11
NEK4-201ENST00000233027 TNPO1Q92973 898 aaKnown RBP15.72■□□□□ 0.11
NEK4-201ENST00000233027 ERLIN2O94905 339 aa15.72■□□□□ 0.11
NEK4-201ENST00000233027 MAPK8IP2Q13387 824 aaPredicted RBP15.72■□□□□ 0.11
NEK4-201ENST00000233027 ZSCAN25Q6NSZ9 544 aa15.72■□□□□ 0.11
NEK4-201ENST00000233027 TOM1L2Q6ZVM7 507 aa15.72■□□□□ 0.11
NEK4-201ENST00000233027 EIF3JO75822 258 aaKnown RBP15.72■□□□□ 0.11
NEK4-201ENST00000233027 CDKL5O76039 1030 aa15.72■□□□□ 0.11
NEK4-201ENST00000233027 KIAA0754O94854 1291 aa15.72■□□□□ 0.11
NEK4-201ENST00000233027 PROSER2Q86WR7 435 aaPredicted RBP15.72■□□□□ 0.11
NEK4-201ENST00000233027 MPHOSPH8Q99549 860 aa15.72■□□□□ 0.11
NEK4-201ENST00000233027 NEFHP12036 1026 aa15.71■□□□□ 0.11
NEK4-201ENST00000233027 SEPT11Q9NVA2 429 aaKnown RBP15.71■□□□□ 0.11
NEK4-201ENST00000233027 LRRFIP2Q9Y608 721 aaKnown RBP15.71■□□□□ 0.11
NEK4-201ENST00000233027 SMTNL1A8MU46 457 aa15.71■□□□□ 0.11
NEK4-201ENST00000233027 SPG7Q9UQ90 795 aa15.71■□□□□ 0.11
NEK4-201ENST00000233027 SSBP05455 408 aaKnown RBP eCLIP15.71■□□□□ 0.11
NEK4-201ENST00000233027 KRT32Q14532 448 aa15.71■□□□□ 0.11
NEK4-201ENST00000233027 NAIPQ13075 1403 aa15.71■□□□□ 0.1
NEK4-201ENST00000233027 TROQ12816 1431 aaPredicted RBP15.7■□□□□ 0.1
NEK4-201ENST00000233027 GNAT3A8MTJ3 354 aa15.7■□□□□ 0.1
NEK4-201ENST00000233027 GUCY1B3Q02153 619 aa15.7■□□□□ 0.1
NEK4-201ENST00000233027 SOGA3Q5TF21 947 aa15.7■□□□□ 0.1
NEK4-201ENST00000233027 UBAC1Q9BSL1 405 aa15.7■□□□□ 0.1
NEK4-201ENST00000233027 CCDC183Q5T5S1 534 aa15.7■□□□□ 0.1
NEK4-201ENST00000233027 PRXQ9BXM0 1461 aa15.7■□□□□ 0.1
NEK4-201ENST00000233027 TMX1Q9H3N1 280 aa15.7■□□□□ 0.1
NEK4-201ENST00000233027 IDH1O75874 414 aaKnown RBP15.7■□□□□ 0.1
NEK4-201ENST00000233027 BOLA2Q9H3K6 86 aa15.7■□□□□ 0.1
NEK4-201ENST00000233027 F6X3S4 739 aa15.69■□□□□ 0.1
NEK4-201ENST00000233027 KIAA1328Q86T90 577 aa15.69■□□□□ 0.1
NEK4-201ENST00000233027 TAX1BP1Q86VP1 789 aa15.69■□□□□ 0.1
NEK4-201ENST00000233027 PDCL3Q9H2J4 239 aa15.69■□□□□ 0.1
NEK4-201ENST00000233027 CTNNA3Q9UI47 895 aa15.69■□□□□ 0.1
NEK4-201ENST00000233027 EPB41L2O43491 1005 aaKnown RBP15.69■□□□□ 0.1
NEK4-201ENST00000233027 GDPD2Q9HCC8 539 aa15.69■□□□□ 0.1
NEK4-201ENST00000233027 IMMTQ16891 758 aaKnown RBP15.69■□□□□ 0.1
NEK4-201ENST00000233027 SLC26A8Q96RN1 970 aa15.69■□□□□ 0.1
NEK4-201ENST00000233027 RAI14Q9P0K7 980 aa15.69■□□□□ 0.1
NEK4-201ENST00000233027 CEP126Q9P2H0 1117 aa15.69■□□□□ 0.1
NEK4-201ENST00000233027 ATAD2Q6PL18 1390 aa15.69■□□□□ 0.1
NEK4-201ENST00000233027 ENOX2Q16206 610 aaKnown RBP15.68■□□□□ 0.1
NEK4-201ENST00000233027 TOP2BQ02880 1626 aa15.68■□□□□ 0.1
NEK4-201ENST00000233027 KIF1BPQ96EK5 621 aa15.68■□□□□ 0.1
NEK4-201ENST00000233027 LUC7LQ9NQ29 371 aaKnown RBP15.68■□□□□ 0.1
NEK4-201ENST00000233027 USP25Q9UHP3 1055 aa15.68■□□□□ 0.1
NEK4-201ENST00000233027 ANKRD62A6NC57 917 aa15.68■□□□□ 0.1
NEK4-201ENST00000233027 UBXN4Q92575 508 aa15.68■□□□□ 0.1
NEK4-201ENST00000233027 PTPN14Q15678 1187 aa15.67■□□□□ 0.1
NEK4-201ENST00000233027 CKAP2LQ8IYA6 745 aa15.67■□□□□ 0.1
NEK4-201ENST00000233027 EIF5P55010 431 aaKnown RBP15.67■□□□□ 0.1
NEK4-201ENST00000233027 RBM27Q9P2N5 1060 aaKnown RBP15.67■□□□□ 0.1
NEK4-201ENST00000233027 PLEKHH2Q8IVE3 1493 aa15.67■□□□□ 0.1
NEK4-201ENST00000233027 PCF11O94913 1555 aaKnown RBP15.67■□□□□ 0.1
NEK4-201ENST00000233027 ARHGAP29Q52LW3 1261 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms