RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 MAPK8IP2Q13387 824 aaPredicted RBP13.99□□□□□ -0.17
CCND1-201ENST00000227507 PTPRTO14522 1441 aa13.98□□□□□ -0.17
CCND1-201ENST00000227507 UGGT1Q9NYU2 1555 aa13.98□□□□□ -0.17
CCND1-201ENST00000227507 KIF16BQ96L93 1317 aa13.98□□□□□ -0.17
CCND1-201ENST00000227507 PHF23Q9BUL5 403 aaPredicted RBP13.98□□□□□ -0.17
CCND1-201ENST00000227507 CCDC39Q9UFE4 941 aa13.98□□□□□ -0.17
CCND1-201ENST00000227507 HMMRO75330 724 aa13.98□□□□□ -0.17
CCND1-201ENST00000227507 NECTIN2Q92692 538 aa13.98□□□□□ -0.17
CCND1-201ENST00000227507 GLI2P10070 1586 aa13.98□□□□□ -0.17
CCND1-201ENST00000227507 PRDM15P57071 1507 aaPredicted RBP13.97□□□□□ -0.17
CCND1-201ENST00000227507 INSRP06213 1382 aa13.97□□□□□ -0.17
CCND1-201ENST00000227507 CDC45O75419 566 aa13.97□□□□□ -0.17
CCND1-201ENST00000227507 NEXNQ0ZGT2 675 aa13.97□□□□□ -0.17
CCND1-201ENST00000227507 DDX54Q8TDD1 881 aaKnown RBP13.97□□□□□ -0.17
CCND1-201ENST00000227507 SNX21Q969T3 373 aa13.97□□□□□ -0.17
CCND1-201ENST00000227507 CHMP3Q9Y3E7 222 aa13.97□□□□□ -0.17
CCND1-201ENST00000227507 ABCC11Q96J66 1382 aa13.97□□□□□ -0.17
CCND1-201ENST00000227507 IGSF3O75054 1194 aa13.97□□□□□ -0.17
CCND1-201ENST00000227507 DIP2BQ9P265 1576 aa13.97□□□□□ -0.17
CCND1-201ENST00000227507 PKP1Q13835 747 aa13.97□□□□□ -0.17
CCND1-201ENST00000227507 TET3O43151 1660 aa13.97□□□□□ -0.17
CCND1-201ENST00000227507 ZFP91Q96JP5 570 aaPredicted RBP13.96□□□□□ -0.17
CCND1-201ENST00000227507 VGLL3A8MV65 326 aa13.96□□□□□ -0.17
CCND1-201ENST00000227507 DDX58O95786 925 aaKnown RBP13.96□□□□□ -0.17
CCND1-201ENST00000227507 POLR1AO95602 1720 aaPredicted RBP13.96□□□□□ -0.17
CCND1-201ENST00000227507 LMTK3Q96Q04 1460 aa13.96□□□□□ -0.17
CCND1-201ENST00000227507 FYB1O15117 783 aa13.96□□□□□ -0.17
CCND1-201ENST00000227507 HDAC1Q13547 482 aaPredicted RBP13.95□□□□□ -0.18
CCND1-201ENST00000227507 SAMD1Q6SPF0 538 aaPredicted RBP13.95□□□□□ -0.18
CCND1-201ENST00000227507 API5Q9BZZ5 524 aaKnown RBP13.95□□□□□ -0.18
CCND1-201ENST00000227507 RBM25P49756 843 aaKnown RBP13.95□□□□□ -0.18
CCND1-201ENST00000227507 PLEKHG1Q9ULL1 1385 aa13.95□□□□□ -0.18
CCND1-201ENST00000227507 NUCB1Q02818 461 aa13.95□□□□□ -0.18
CCND1-201ENST00000227507 CHAF1AQ13111 956 aaPredicted RBP13.95□□□□□ -0.18
CCND1-201ENST00000227507 ZGPATQ8N5A5 531 aaKnown RBP13.95□□□□□ -0.18
CCND1-201ENST00000227507 IPO4Q8TEX9 1081 aaKnown RBP13.95□□□□□ -0.18
CCND1-201ENST00000227507 NGLY1Q96IV0 654 aa13.95□□□□□ -0.18
CCND1-201ENST00000227507 THUMPD2Q9BTF0 503 aaKnown RBP13.95□□□□□ -0.18
CCND1-201ENST00000227507 GDPD2Q9HCC8 539 aa13.95□□□□□ -0.18
CCND1-201ENST00000227507 ASXL1Q8IXJ9 1541 aa13.95□□□□□ -0.18
CCND1-201ENST00000227507 SPDYE4A6NLX3 237 aa13.94□□□□□ -0.18
CCND1-201ENST00000227507 JARID2Q92833 1246 aaPredicted RBP13.94□□□□□ -0.18
CCND1-201ENST00000227507 PPP1R9BQ96SB3 815 aa13.94□□□□□ -0.18
CCND1-201ENST00000227507 ZKSCAN5Q9Y2L8 839 aa13.94□□□□□ -0.18
CCND1-201ENST00000227507 FKBP5Q13451 457 aaPredicted RBP13.94□□□□□ -0.18
CCND1-201ENST00000227507 SIRT1Q96EB6 747 aa13.94□□□□□ -0.18
CCND1-201ENST00000227507 SASS6Q6UVJ0 657 aa13.94□□□□□ -0.18
CCND1-201ENST00000227507 SMAP1Q8IYB5 467 aaPredicted RBP13.94□□□□□ -0.18
CCND1-201ENST00000227507 PIK3C2GO75747 1445 aa13.94□□□□□ -0.18
CCND1-201ENST00000227507 MTERF4Q7Z6M4 381 aaKnown RBP13.94□□□□□ -0.18
CCND1-201ENST00000227507 IQGAP3Q86VI3 1631 aa13.93□□□□□ -0.18
CCND1-201ENST00000227507 NEK4P51957 841 aa13.93□□□□□ -0.18
CCND1-201ENST00000227507 RABEP1Q15276 862 aa13.93□□□□□ -0.18
CCND1-201ENST00000227507 BMP2KLQ5H9B9 411 aa13.93□□□□□ -0.18
CCND1-201ENST00000227507 NOL7Q9UMY1 257 aaKnown RBP13.93□□□□□ -0.18
CCND1-201ENST00000227507 TMX4Q9H1E5 349 aaPredicted RBP13.93□□□□□ -0.18
CCND1-201ENST00000227507 TMPOP42166 694 aaKnown RBP13.93□□□□□ -0.18
CCND1-201ENST00000227507 CABP4P57796 275 aa13.93□□□□□ -0.18
CCND1-201ENST00000227507 NPHP4O75161 1426 aaPredicted RBP13.92□□□□□ -0.18
CCND1-201ENST00000227507 NFE2L2Q16236 605 aa13.92□□□□□ -0.18
CCND1-201ENST00000227507 C17orf53Q8N3J3 647 aaPredicted RBP13.92□□□□□ -0.18
CCND1-201ENST00000227507 DYNC1I1O14576 645 aa13.92□□□□□ -0.18
CCND1-201ENST00000227507 SYAP1Q96A49 352 aaPredicted RBP13.92□□□□□ -0.18
CCND1-201ENST00000227507 CROCC2H7BZ55 1655 aa13.92□□□□□ -0.18
CCND1-201ENST00000227507 ZBTB40Q9NUA8 1239 aa13.91□□□□□ -0.18
CCND1-201ENST00000227507 PLA2R1Q13018 1463 aa13.91□□□□□ -0.18
CCND1-201ENST00000227507 DIP2CQ9Y2E4 1556 aa13.91□□□□□ -0.18
CCND1-201ENST00000227507 KIF1BO60333 1816 aa13.9□□□□□ -0.18
CCND1-201ENST00000227507 CHRNA2Q15822 529 aa13.9□□□□□ -0.18
CCND1-201ENST00000227507 TSPY26PQ9H489 355 aa13.9□□□□□ -0.18
CCND1-201ENST00000227507 C9orf78Q9NZ63 289 aaPredicted RBP13.9□□□□□ -0.18
CCND1-201ENST00000227507 ZNF771Q7L3S4 317 aaPredicted RBP13.9□□□□□ -0.18
CCND1-201ENST00000227507 C16orf71Q8IYS4 520 aaPredicted RBP13.9□□□□□ -0.18
CCND1-201ENST00000227507 UNC13BO14795 1591 aa13.9□□□□□ -0.18
CCND1-201ENST00000227507 AMOTQ4VCS5 1084 aa13.9□□□□□ -0.18
CCND1-201ENST00000227507 DRC7Q8IY82 874 aa13.9□□□□□ -0.18
CCND1-201ENST00000227507 USHBP1Q8N6Y0 703 aa13.9□□□□□ -0.18
CCND1-201ENST00000227507 MYOM2P54296 1465 aa13.9□□□□□ -0.18
CCND1-201ENST00000227507 A0A1W2PP64 1363 aa13.89□□□□□ -0.19
CCND1-201ENST00000227507 ORAI2Q96SN7 254 aa13.89□□□□□ -0.19
CCND1-201ENST00000227507 TTC12Q9H892 705 aaPredicted RBP13.89□□□□□ -0.19
CCND1-201ENST00000227507 USP25Q9UHP3 1055 aa13.89□□□□□ -0.19
CCND1-201ENST00000227507 TRIM6-TRIM34B2RNG4 842 aa13.89□□□□□ -0.19
CCND1-201ENST00000227507 SMARCA5O60264 1052 aaPredicted RBP13.89□□□□□ -0.19
CCND1-201ENST00000227507 PPP4R3BQ5MIZ7 849 aa13.89□□□□□ -0.19
CCND1-201ENST00000227507 INTS3Q68E01 1043 aaKnown RBP13.89□□□□□ -0.19
CCND1-201ENST00000227507 LRRC59Q96AG4 307 aaKnown RBP13.89□□□□□ -0.19
CCND1-201ENST00000227507 GCC1Q96CN9 775 aa13.89□□□□□ -0.19
CCND1-201ENST00000227507 CCDC30Q5VVM6 783 aa13.89□□□□□ -0.19
CCND1-201ENST00000227507 SPC24Q8NBT2 197 aa13.89□□□□□ -0.19
CCND1-201ENST00000227507 METP08581 1390 aa13.89□□□□□ -0.19
CCND1-201ENST00000227507 GNAT3A8MTJ3 354 aa13.89□□□□□ -0.19
CCND1-201ENST00000227507 TWISTNBQ3B726 338 aaPredicted RBP13.89□□□□□ -0.19
CCND1-201ENST00000227507 LMBRD1Q9NUN5 540 aa13.89□□□□□ -0.19
CCND1-201ENST00000227507 GORABQ5T7V8 394 aa13.88□□□□□ -0.19
CCND1-201ENST00000227507 INO80Q9ULG1 1556 aaPredicted RBP13.88□□□□□ -0.19
CCND1-201ENST00000227507 FBLN1P23142 703 aa13.88□□□□□ -0.19
CCND1-201ENST00000227507 RILPL2Q969X0 211 aa13.88□□□□□ -0.19
CCND1-201ENST00000227507 ANKRD24Q8TF21 1146 aa13.87□□□□□ -0.19
CCND1-201ENST00000227507 TMEM63CQ9P1W3 806 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms