RNA–Protein interactions for RNA: ENST00000216832.8

PNN-201, Transcript of pinin, desmosome associated protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNN, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-201ENST00000216832 SMIM5Q71RC9 77 aa9.54□□□□□ -0.88
PNN-201ENST00000216832 EIF2AK4Q9P2K8 1649 aaKnown RBP9.53□□□□□ -0.88
PNN-201ENST00000216832 UBE2Q2Q8WVN8 375 aa9.53□□□□□ -0.88
PNN-201ENST00000216832 SEC24BO95487 1268 aa9.53□□□□□ -0.88
PNN-201ENST00000216832 RWDD1Q9H446 243 aaPredicted RBP9.53□□□□□ -0.88
PNN-201ENST00000216832 DCCP43146 1447 aa9.53□□□□□ -0.88
PNN-201ENST00000216832 FHDC1Q9C0D6 1143 aaPredicted RBP9.53□□□□□ -0.88
PNN-201ENST00000216832 TMOD3Q9NYL9 352 aa9.53□□□□□ -0.88
PNN-201ENST00000216832 BCS1LQ9Y276 419 aa9.53□□□□□ -0.88
PNN-201ENST00000216832 HMOX1P09601 288 aa9.52□□□□□ -0.89
PNN-201ENST00000216832 TECPR2O15040 1411 aa9.52□□□□□ -0.89
PNN-201ENST00000216832 GRM1Q13255 1194 aa9.52□□□□□ -0.89
PNN-201ENST00000216832 MARCH10Q8NA82 808 aaPredicted RBP9.52□□□□□ -0.89
PNN-201ENST00000216832 SPINK5Q9NQ38 1064 aaPredicted RBP9.52□□□□□ -0.89
PNN-201ENST00000216832 EMILIN1Q9Y6C2 1016 aa9.52□□□□□ -0.89
PNN-201ENST00000216832 TET3O43151 1660 aa9.52□□□□□ -0.89
PNN-201ENST00000216832 PLEKHG3A1L390 1219 aa9.52□□□□□ -0.89
PNN-201ENST00000216832 HSCBQ8IWL3 235 aa9.52□□□□□ -0.89
PNN-201ENST00000216832 CDCA7Q9BWT1 371 aaPredicted RBP9.52□□□□□ -0.89
PNN-201ENST00000216832 LMTK2Q8IWU2 1503 aa9.51□□□□□ -0.89
PNN-201ENST00000216832 PDE3AQ14432 1141 aa9.51□□□□□ -0.89
PNN-201ENST00000216832 SIRT1Q96EB6 747 aa9.51□□□□□ -0.89
PNN-201ENST00000216832 MROH1Q8NDA8 1641 aa9.51□□□□□ -0.89
PNN-201ENST00000216832 ALKQ9UM73 1620 aa9.51□□□□□ -0.89
PNN-201ENST00000216832 EP400Q96L91 3159 aa9.51□□□□□ -0.89
PNN-201ENST00000216832 ZC3H13Q5T200 1668 aaKnown RBP9.51□□□□□ -0.89
PNN-201ENST00000216832 PTCH1Q13635 1447 aa9.51□□□□□ -0.89
PNN-201ENST00000216832 CABP4P57796 275 aa9.51□□□□□ -0.89
PNN-201ENST00000216832 C16orf71Q8IYS4 520 aaPredicted RBP9.51□□□□□ -0.89
PNN-201ENST00000216832 ANP32BQ92688 251 aaKnown RBP9.51□□□□□ -0.89
PNN-201ENST00000216832 PRAG1Q86YV5 1406 aa9.51□□□□□ -0.89
PNN-201ENST00000216832 DEPDC5O75140 1603 aa9.51□□□□□ -0.89
PNN-201ENST00000216832 ATP6V1AP38606 617 aa9.5□□□□□ -0.89
PNN-201ENST00000216832 MYH16Q9H6N6 1097 aa9.5□□□□□ -0.89
PNN-201ENST00000216832 GNPATO15228 680 aa9.5□□□□□ -0.89
PNN-201ENST00000216832 ZNF428Q96B54 188 aa9.5□□□□□ -0.89
PNN-201ENST00000216832 PLCB2Q00722 1185 aa9.5□□□□□ -0.89
PNN-201ENST00000216832 ZNF530Q6P9A1 599 aaPredicted RBP9.49□□□□□ -0.89
PNN-201ENST00000216832 PDZRN3Q9UPQ7 1066 aa9.49□□□□□ -0.89
PNN-201ENST00000216832 SPG7Q9UQ90 795 aa9.49□□□□□ -0.89
PNN-201ENST00000216832 WDR17Q8IZU2 1322 aa9.49□□□□□ -0.89
PNN-201ENST00000216832 RFC4P35249 363 aa9.49□□□□□ -0.89
PNN-201ENST00000216832 SLC15A2Q16348 729 aa9.49□□□□□ -0.89
PNN-201ENST00000216832 ARHGEF25Q86VW2 580 aa9.49□□□□□ -0.89
PNN-201ENST00000216832 CFAP53Q96M91 514 aa9.49□□□□□ -0.89
PNN-201ENST00000216832 MTHFSP49914 203 aa9.49□□□□□ -0.89
PNN-201ENST00000216832 ARHGAP27Q6ZUM4 889 aa9.49□□□□□ -0.89
PNN-201ENST00000216832 PAXIP1Q6ZW49 1069 aaPredicted RBP9.49□□□□□ -0.89
PNN-201ENST00000216832 CAPN15O75808 1086 aa9.48□□□□□ -0.89
PNN-201ENST00000216832 HSP90AB1P08238 724 aaKnown RBP9.48□□□□□ -0.89
PNN-201ENST00000216832 TPRNQ4KMQ1 711 aa9.48□□□□□ -0.89
PNN-201ENST00000216832 TTC5Q8N0Z6 440 aa9.48□□□□□ -0.89
PNN-201ENST00000216832 CARD10Q9BWT7 1032 aa9.48□□□□□ -0.89
PNN-201ENST00000216832 TBC1D2Q9BYX2 928 aa9.48□□□□□ -0.89
PNN-201ENST00000216832 ZNF142P52746 1687 aaPredicted RBP9.48□□□□□ -0.89
PNN-201ENST00000216832 SBNO1A3KN83 1393 aa9.48□□□□□ -0.89
PNN-201ENST00000216832 BCL9LQ86UU0 1499 aa9.48□□□□□ -0.89
PNN-201ENST00000216832 TEFQ10587 303 aa9.48□□□□□ -0.89
PNN-201ENST00000216832 HSP90AA2PQ14568 343 aaPredicted RBP9.48□□□□□ -0.89
PNN-201ENST00000216832 CFAP44Q96MT7 982 aa9.48□□□□□ -0.89
PNN-201ENST00000216832 E9PCH4 1651 aa9.48□□□□□ -0.89
PNN-201ENST00000216832 TRAK2O60296 914 aa9.48□□□□□ -0.89
PNN-201ENST00000216832 C22orf23Q9BZE7 217 aa9.48□□□□□ -0.89
PNN-201ENST00000216832 GPBP1L1Q9HC44 474 aaPredicted RBP9.48□□□□□ -0.89
PNN-201ENST00000216832 TMEM131LA2VDJ0 1609 aa9.47□□□□□ -0.89
PNN-201ENST00000216832 U2AF1L5P0DN76 240 aaPredicted RBP9.47□□□□□ -0.89
PNN-201ENST00000216832 U2AF1Q01081 240 aaKnown RBP eCLIP9.47□□□□□ -0.89
PNN-201ENST00000216832 ITPRIPQ8IWB1 547 aa9.47□□□□□ -0.89
PNN-201ENST00000216832 VSIG10Q8N0Z9 540 aa9.47□□□□□ -0.89
PNN-201ENST00000216832 CHMP5Q9NZZ3 219 aa9.47□□□□□ -0.89
PNN-201ENST00000216832 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.47□□□□□ -0.89
PNN-201ENST00000216832 MCM4P33991 863 aa9.47□□□□□ -0.89
PNN-201ENST00000216832 WWC1Q8IX03 1113 aa9.47□□□□□ -0.89
PNN-201ENST00000216832 RRAGDQ9NQL2 400 aaPredicted RBP9.47□□□□□ -0.89
PNN-201ENST00000216832 THRAP3Q9Y2W1 955 aaKnown RBP9.47□□□□□ -0.89
PNN-201ENST00000216832 MAP3K19Q56UN5 1328 aa9.47□□□□□ -0.89
PNN-201ENST00000216832 SULT6B1Q6IMI4 303 aa9.47□□□□□ -0.89
PNN-201ENST00000216832 RTF1Q92541 710 aaKnown RBP9.47□□□□□ -0.89
PNN-201ENST00000216832 FOXD4L1Q9NU39 408 aa9.47□□□□□ -0.89
PNN-201ENST00000216832 SYT17Q9BSW7 474 aa9.46□□□□□ -0.89
PNN-201ENST00000216832 CLTCL1P53675 1640 aa9.46□□□□□ -0.89
PNN-201ENST00000216832 SMC4Q9NTJ3 1288 aa9.46□□□□□ -0.9
PNN-201ENST00000216832 PANK2Q9BZ23 570 aa9.45□□□□□ -0.9
PNN-201ENST00000216832 PIK3C2GO75747 1445 aa9.45□□□□□ -0.9
PNN-201ENST00000216832 TTC21AQ8NDW8 1320 aa9.45□□□□□ -0.9
PNN-201ENST00000216832 ZPR1O75312 459 aa9.45□□□□□ -0.9
PNN-201ENST00000216832 XRCC6P12956 609 aaKnown RBP eCLIP9.45□□□□□ -0.9
PNN-201ENST00000216832 NBPF6Q5VWK0 638 aa9.45□□□□□ -0.9
PNN-201ENST00000216832 NBPF4Q96M43 638 aa9.45□□□□□ -0.9
PNN-201ENST00000216832 FCHSD2O94868 740 aa9.45□□□□□ -0.9
PNN-201ENST00000216832 NCLP19338 710 aaKnown RBP9.45□□□□□ -0.9
PNN-201ENST00000216832 CCDC24Q8N4L8 307 aa9.45□□□□□ -0.9
PNN-201ENST00000216832 CAMKK2Q96RR4 588 aa9.45□□□□□ -0.9
PNN-201ENST00000216832 PCDHB15Q9Y5E8 787 aa9.45□□□□□ -0.9
PNN-201ENST00000216832 HOMEZQ8IX15 550 aa9.44□□□□□ -0.9
PNN-201ENST00000216832 ZNF622Q969S3 477 aaKnown RBP eCLIP9.44□□□□□ -0.93e-8■■□□□ 12.8
PNN-201ENST00000216832 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.44□□□□□ -0.9
PNN-201ENST00000216832 GOLGA6L22H0YM25 854 aa9.44□□□□□ -0.9
PNN-201ENST00000216832 MRE11P49959 708 aa9.44□□□□□ -0.9
PNN-201ENST00000216832 PLEKHO1Q53GL0 409 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms