RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 DCCP43146 1447 aa37.76■■■■□ 3.64
PABPN1-201ENST00000216727 HDAC1Q13547 482 aaPredicted RBP37.75■■■■□ 3.63
PABPN1-201ENST00000216727 FAM161AQ3B820 660 aa37.75■■■■□ 3.63
PABPN1-201ENST00000216727 MST1RQ04912 1400 aa37.74■■■■□ 3.63
PABPN1-201ENST00000216727 LTV1Q96GA3 475 aaPredicted RBP37.73■■■■□ 3.63
PABPN1-201ENST00000216727 CHMP4BQ9H444 224 aaKnown RBP37.73■■■■□ 3.63
PABPN1-201ENST00000216727 TMEM94Q12767 1356 aa37.72■■■■□ 3.63
PABPN1-201ENST00000216727 ABCC4O15439 1325 aa37.72■■■■□ 3.63
PABPN1-201ENST00000216727 STRCP1A6NGW2 1772 aa37.72■■■■□ 3.63
PABPN1-201ENST00000216727 LRRC37A3O60309 1634 aa37.71■■■■□ 3.63
PABPN1-201ENST00000216727 USP19O94966 1318 aa37.71■■■■□ 3.63
PABPN1-201ENST00000216727 GCP02774 474 aa37.7■■■■□ 3.63
PABPN1-201ENST00000216727 KRT28Q7Z3Y7 464 aa37.7■■■■□ 3.63
PABPN1-201ENST00000216727 API5Q9BZZ5 524 aaKnown RBP37.7■■■■□ 3.63
PABPN1-201ENST00000216727 GNAT3A8MTJ3 354 aa37.69■■■■□ 3.62
PABPN1-201ENST00000216727 XPCQ01831 940 aaPredicted RBP37.69■■■■□ 3.62
PABPN1-201ENST00000216727 C8orf34Q49A92 452 aa37.69■■■■□ 3.62
PABPN1-201ENST00000216727 ATF3P18847 181 aa37.68■■■■□ 3.62
PABPN1-201ENST00000216727 ARHGEF25Q86VW2 580 aa37.68■■■■□ 3.62
PABPN1-201ENST00000216727 IPO9Q96P70 1041 aaKnown RBP37.66■■■■□ 3.62
PABPN1-201ENST00000216727 MAP3K5Q99683 1374 aa37.66■■■■□ 3.62
PABPN1-201ENST00000216727 PDZRN3Q9UPQ7 1066 aa37.65■■■■□ 3.62
PABPN1-201ENST00000216727 MSH6P52701 1360 aa37.65■■■■□ 3.62
PABPN1-201ENST00000216727 KRT24Q2M2I5 525 aa37.65■■■■□ 3.62
PABPN1-201ENST00000216727 TSPYL4Q9UJ04 414 aa37.65■■■■□ 3.62
PABPN1-201ENST00000216727 ZBTB7BO15156 539 aaPredicted RBP37.64■■■■□ 3.62
PABPN1-201ENST00000216727 NBPF6Q5VWK0 638 aa37.63■■■■□ 3.61
PABPN1-201ENST00000216727 NBPF4Q96M43 638 aa37.63■■■■□ 3.61
PABPN1-201ENST00000216727 ALS2Q96Q42 1657 aa37.61■■■■□ 3.61
PABPN1-201ENST00000216727 BABAM1Q9NWV8 329 aa37.61■■■■□ 3.61
PABPN1-201ENST00000216727 USHBP1Q8N6Y0 703 aa37.6■■■■□ 3.61
PABPN1-201ENST00000216727 HSPA2P54652 639 aa37.59■■■■□ 3.61
PABPN1-201ENST00000216727 CADPS2Q86UW7 1296 aa37.58■■■■□ 3.61
PABPN1-201ENST00000216727 SMC5Q8IY18 1101 aa37.58■■■■□ 3.61
PABPN1-201ENST00000216727 MIS18AQ9NYP9 233 aa37.58■■■■□ 3.61
PABPN1-201ENST00000216727 NCAPD2Q15021 1401 aa37.58■■■■□ 3.61
PABPN1-201ENST00000216727 LMOD2Q6P5Q4 547 aa37.58■■■■□ 3.61
PABPN1-201ENST00000216727 IL17REQ8NFR9 667 aa37.56■■■■□ 3.6
PABPN1-201ENST00000216727 PTPRCP08575 1304 aa37.56■■■■□ 3.6
PABPN1-201ENST00000216727 ANP32EQ9BTT0 268 aa37.56■■■■□ 3.6
PABPN1-201ENST00000216727 NPM2Q86SE8 214 aaKnown RBP37.55■■■■□ 3.6
PABPN1-201ENST00000216727 ZBTB7CA1YPR0 619 aa37.54■■■■□ 3.6
PABPN1-201ENST00000216727 VIRMAQ69YN4 1812 aaKnown RBP37.53■■■■□ 3.6
PABPN1-201ENST00000216727 RGS12O14924 1447 aa37.53■■■■□ 3.6
PABPN1-201ENST00000216727 SOS1Q07889 1333 aaPredicted RBP37.52■■■■□ 3.6
PABPN1-201ENST00000216727 RGPD2P0DJD1 1756 aa37.52■■■■□ 3.6
PABPN1-201ENST00000216727 INTS3Q68E01 1043 aaKnown RBP37.52■■■■□ 3.6
PABPN1-201ENST00000216727 NOP58Q9Y2X3 529 aaKnown RBP37.52■■■■□ 3.6
PABPN1-201ENST00000216727 TAF7Q15545 349 aaPredicted RBP37.51■■■■□ 3.59
PABPN1-201ENST00000216727 CEMIPQ8WUJ3 1361 aa37.5■■■■□ 3.59
PABPN1-201ENST00000216727 ERICH6Q7L0X2 663 aa37.49■■■■□ 3.59
PABPN1-201ENST00000216727 CAMTA1Q9Y6Y1 1673 aa37.49■■■■□ 3.59
PABPN1-201ENST00000216727 MED1Q15648 1581 aaPredicted RBP37.49■■■■□ 3.59
PABPN1-201ENST00000216727 LMTK3Q96Q04 1460 aa37.49■■■■□ 3.59
PABPN1-201ENST00000216727 LRRC59Q96AG4 307 aaKnown RBP37.48■■■■□ 3.59
PABPN1-201ENST00000216727 NPHP3Q7Z494 1330 aa37.48■■■■□ 3.59
PABPN1-201ENST00000216727 ANKRD24Q8TF21 1146 aa37.48■■■■□ 3.59
PABPN1-201ENST00000216727 SLC4A2P04920 1241 aa37.46■■■■□ 3.59
PABPN1-201ENST00000216727 AMOTQ4VCS5 1084 aa37.44■■■■□ 3.58
PABPN1-201ENST00000216727 KDM4FA0A1W2PPD8 638 aa37.44■■■■□ 3.58
PABPN1-201ENST00000216727 PLEKHO1Q53GL0 409 aaPredicted RBP37.44■■■■□ 3.58
PABPN1-201ENST00000216727 LMO7Q8WWI1 1683 aa37.44■■■■□ 3.58
PABPN1-201ENST00000216727 ZBTB47Q9UFB7 747 aaPredicted RBP37.43■■■■□ 3.58
PABPN1-201ENST00000216727 AXIN2Q9Y2T1 843 aa37.43■■■■□ 3.58
PABPN1-201ENST00000216727 STRCQ7RTU9 1775 aa37.43■■■■□ 3.58
PABPN1-201ENST00000216727 XIRP1Q702N8 1843 aaKnown RBP37.42■■■■□ 3.58
PABPN1-201ENST00000216727 AKAP4Q5JQC9 854 aa37.41■■■■□ 3.58
PABPN1-201ENST00000216727 GCC1Q96CN9 775 aa37.41■■■■□ 3.58
PABPN1-201ENST00000216727 NUCB1Q02818 461 aa37.4■■■■□ 3.58
PABPN1-201ENST00000216727 TNS3Q68CZ2 1445 aa37.4■■■■□ 3.58
PABPN1-201ENST00000216727 PLEKHG5O94827 1062 aa37.39■■■■□ 3.58
PABPN1-201ENST00000216727 PXDNQ92626 1479 aa37.39■■■■□ 3.58
PABPN1-201ENST00000216727 CCDC30Q5VVM6 783 aa37.38■■■■□ 3.57
PABPN1-201ENST00000216727 STK31Q9BXU1 1019 aa37.38■■■■□ 3.57
PABPN1-201ENST00000216727 C1orf115Q9H7X2 142 aa37.38■■■■□ 3.57
PABPN1-201ENST00000216727 ERBB3P21860 1342 aa37.38■■■■□ 3.57
PABPN1-201ENST00000216727 DDX17Q92841 729 aaKnown RBP37.37■■■■□ 3.57
PABPN1-201ENST00000216727 DDRGK1Q96HY6 314 aa37.37■■■■□ 3.57
PABPN1-201ENST00000216727 ZNF530Q6P9A1 599 aaPredicted RBP37.36■■■■□ 3.57
PABPN1-201ENST00000216727 FAM208AQ9UK61 1670 aaKnown RBP37.36■■■■□ 3.57
PABPN1-201ENST00000216727 SIRT2Q8IXJ6 389 aa37.36■■■■□ 3.57
PABPN1-201ENST00000216727 CACNA1FO60840 1977 aa37.35■■■■□ 3.57
PABPN1-201ENST00000216727 OVOS2A0A0G2JMS6 1433 aa37.34■■■■□ 3.57
PABPN1-201ENST00000216727 RGPD5Q99666 1765 aa37.34■■■■□ 3.57
PABPN1-201ENST00000216727 ZC3H6P61129 1189 aaKnown RBP37.34■■■■□ 3.57
PABPN1-201ENST00000216727 LGR6Q9HBX8 967 aa37.33■■■■□ 3.57
PABPN1-201ENST00000216727 ABCC6O95255 1503 aa37.33■■■■□ 3.57
PABPN1-201ENST00000216727 G2E3Q7L622 706 aa37.32■■■■□ 3.57
PABPN1-201ENST00000216727 SPATA31A3Q5VYP0 1347 aa37.32■■■■□ 3.57
PABPN1-201ENST00000216727 CHD1LQ86WJ1 897 aa37.32■■■■□ 3.56
PABPN1-201ENST00000216727 KDM3BQ7LBC6 1761 aa37.3■■■■□ 3.56
PABPN1-201ENST00000216727 COL18A1P39060 1754 aa37.29■■■■□ 3.56
PABPN1-201ENST00000216727 C1orf141Q5JVX7 400 aa37.29■■■■□ 3.56
PABPN1-201ENST00000216727 CCT4P50991 539 aaKnown RBP37.29■■■■□ 3.56
PABPN1-201ENST00000216727 CRYBG1Q9Y4K1 1723 aa37.28■■■■□ 3.56
PABPN1-201ENST00000216727 HOXB7P09629 217 aa37.27■■■■□ 3.56
PABPN1-201ENST00000216727 TEFQ10587 303 aa37.26■■■■□ 3.56
PABPN1-201ENST00000216727 FLIIQ13045 1269 aa37.26■■■■□ 3.56
PABPN1-201ENST00000216727 BRINP3Q76B58 766 aa37.26■■■■□ 3.56
PABPN1-201ENST00000216727 RPAP2Q8IXW5 612 aaPredicted RBP37.26■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms