RNA–Protein interactions for RNA: ENSMUST00000113705.7

Tpm1-215, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,759 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-215ENSMUST00000113705 5031410I06RikE9Q4E0 267 aa21.52■■□□□ 1.04
Tpm1-215ENSMUST00000113705 Gm1979E9QAN3 267 aa21.52■■□□□ 1.04
Tpm1-215ENSMUST00000113705 Gm5862K7N5V5 267 aa21.52■■□□□ 1.04
Tpm1-215ENSMUST00000113705 Gm10220K7N660 267 aa21.52■■□□□ 1.04
Tpm1-215ENSMUST00000113705 Vars2Q3U2A8 1060 aa21.52■■□□□ 1.04
Tpm1-215ENSMUST00000113705 ApobrQ8VBT6 942 aa21.52■■□□□ 1.04
Tpm1-215ENSMUST00000113705 Kiaa1107Q80TK0 1369 aa21.51■■□□□ 1.03
Tpm1-215ENSMUST00000113705 Apba2P98084 750 aa21.51■■□□□ 1.03
Tpm1-215ENSMUST00000113705 Exoc6Q8R313 802 aa21.51■■□□□ 1.03
Tpm1-215ENSMUST00000113705 Nsd3Q6P2L6 1439 aa21.51■■□□□ 1.03
Tpm1-215ENSMUST00000113705 Eif3bQ8JZQ9 803 aaKnown RBP21.51■■□□□ 1.03
Tpm1-215ENSMUST00000113705 Q8BT18 775 aa21.5■■□□□ 1.03
Tpm1-215ENSMUST00000113705 Afg3l2Q8JZQ2 802 aaKnown RBP21.49■■□□□ 1.03
Tpm1-215ENSMUST00000113705 Ciz1Q8VEH2 845 aa21.49■■□□□ 1.03
Tpm1-215ENSMUST00000113705 Stk31Q99MW1 1018 aa21.49■■□□□ 1.03
Tpm1-215ENSMUST00000113705 Ccnl1Q52KE7 532 aaKnown RBP21.48■■□□□ 1.03
Tpm1-215ENSMUST00000113705 Slc5a1Q8C3K6 665 aa21.48■■□□□ 1.03
Tpm1-215ENSMUST00000113705 Phkg2Q9DB30 406 aa21.48■■□□□ 1.03
Tpm1-215ENSMUST00000113705 Shank3Q4ACU6 1730 aa21.48■■□□□ 1.03
Tpm1-215ENSMUST00000113705 PappaQ8R4K8 1624 aa21.47■■□□□ 1.03
Tpm1-215ENSMUST00000113705 Amotl1Q9D4H4 968 aa21.47■■□□□ 1.03
Tpm1-215ENSMUST00000113705 Abca3Q8R420 1704 aa21.47■■□□□ 1.03
Tpm1-215ENSMUST00000113705 Asic4Q7TNS7 539 aa21.46■■□□□ 1.03
Tpm1-215ENSMUST00000113705 Pdzd9Q9D9M4 266 aa21.46■■□□□ 1.03
Tpm1-215ENSMUST00000113705 Cabp2Q9JLK4 216 aa21.46■■□□□ 1.03
Tpm1-215ENSMUST00000113705 Chmp7Q8R1T1 451 aa21.45■■□□□ 1.02
Tpm1-215ENSMUST00000113705 Pim2Q62070 370 aa21.44■■□□□ 1.02
Tpm1-215ENSMUST00000113705 Klc3Q91W40 508 aa21.43■■□□□ 1.02
Tpm1-215ENSMUST00000113705 Aox2Q5SGK3 1345 aa21.43■■□□□ 1.02
Tpm1-215ENSMUST00000113705 Ezh2Q61188 746 aaKnown RBP21.43■■□□□ 1.02
Tpm1-215ENSMUST00000113705 Snap23O09044 210 aa21.42■■□□□ 1.02
Tpm1-215ENSMUST00000113705 TmpoQ61033 693 aaKnown RBP21.42■■□□□ 1.02
Tpm1-215ENSMUST00000113705 VirmaA2AIV2 1811 aaKnown RBP21.42■■□□□ 1.02
Tpm1-215ENSMUST00000113705 Rps6ka4Q9Z2B9 773 aa21.41■■□□□ 1.02
Tpm1-215ENSMUST00000113705 Sos2Q02384 1333 aa21.41■■□□□ 1.02
Tpm1-215ENSMUST00000113705 Ankrd13dQ6PD24 605 aa21.4■■□□□ 1.02
Tpm1-215ENSMUST00000113705 Rab11fip3Q8CHD8 1047 aa21.4■■□□□ 1.02
Tpm1-215ENSMUST00000113705 Crb1Q8VHS2 1405 aa21.4■■□□□ 1.02
Tpm1-215ENSMUST00000113705 Tjp1P39447 1745 aaKnown RBP21.39■■□□□ 1.01
Tpm1-215ENSMUST00000113705 Apaf1O88879 1249 aa21.38■■□□□ 1.01
Tpm1-215ENSMUST00000113705 Ints5Q8CHT3 1018 aa21.38■■□□□ 1.01
Tpm1-215ENSMUST00000113705 Ssfa2Q922B9 1252 aa21.38■■□□□ 1.01
Tpm1-215ENSMUST00000113705 Sall2Q9QX96 1004 aa21.38■■□□□ 1.01
Tpm1-215ENSMUST00000113705 Trpm3Q5F4S9 1721 aa21.38■■□□□ 1.01
Tpm1-215ENSMUST00000113705 Mapk8ip3Q9ESN9 1337 aa21.37■■□□□ 1.01
Tpm1-215ENSMUST00000113705 Nkx2-3P97334 362 aa21.37■■□□□ 1.01
Tpm1-215ENSMUST00000113705 Ccdc155Q80VJ8 648 aa21.37■■□□□ 1.01
Tpm1-215ENSMUST00000113705 Kiaa0319lQ8K135 1048 aa21.37■■□□□ 1.01
Tpm1-215ENSMUST00000113705 Fchsd2Q3USJ8 740 aa21.36■■□□□ 1.01
Tpm1-215ENSMUST00000113705 Iqcf3Q9D498 203 aa21.36■■□□□ 1.01
Tpm1-215ENSMUST00000113705 Q4VA45 678 aa21.36■■□□□ 1.01
Tpm1-215ENSMUST00000113705 Atf7ipQ7TT18 1306 aa21.35■■□□□ 1.01
Tpm1-215ENSMUST00000113705 Mrs2Q5NCE8 434 aa21.35■■□□□ 1.01
Tpm1-215ENSMUST00000113705 Hdac6Q9Z2V5 1149 aa21.35■■□□□ 1.01
Tpm1-215ENSMUST00000113705 Bicdl1A0JNT9 577 aa21.33■■□□□ 1
Tpm1-215ENSMUST00000113705 Ccdc85cE9Q6B2 420 aa21.31■■□□□ 1
Tpm1-215ENSMUST00000113705 Rtf1A2AQ19 715 aaKnown RBP21.3■■□□□ 1
Tpm1-215ENSMUST00000113705 Zscan21Q07231 555 aa21.3■■□□□ 1
Tpm1-215ENSMUST00000113705 Golga2Q921M4 999 aa21.3■■□□□ 1
Tpm1-215ENSMUST00000113705 Esx1O88933 382 aa21.29■■□□□ 1
Tpm1-215ENSMUST00000113705 Atg3Q9CPX6 314 aa21.29■■□□□ 1
Tpm1-215ENSMUST00000113705 Ubr2Q6WKZ8 1755 aa21.28■■□□□ 1
Tpm1-215ENSMUST00000113705 Senp3Q9EP97 568 aaKnown RBP21.28■■□□□ 1
Tpm1-215ENSMUST00000113705 Cap2Q9CYT6 476 aa21.27■■□□□ 1
Tpm1-215ENSMUST00000113705 Fam198bQ3UPI1 517 aa21.26■□□□□ 0.99
Tpm1-215ENSMUST00000113705 Jmjd4Q8BFT6 427 aa21.25■□□□□ 0.99
Tpm1-215ENSMUST00000113705 Abcc12Q80WJ6 1366 aa21.24■□□□□ 0.99
Tpm1-215ENSMUST00000113705 Sos1Q62245 1319 aa21.24■□□□□ 0.99
Tpm1-215ENSMUST00000113705 Dcaf5Q80T85 946 aa21.24■□□□□ 0.99
Tpm1-215ENSMUST00000113705 Irx6Q9ER75 438 aa21.24■□□□□ 0.99
Tpm1-215ENSMUST00000113705 Kif23E9Q5G3 953 aa21.23■□□□□ 0.99
Tpm1-215ENSMUST00000113705 PsdQ5DTT2 1024 aa21.23■□□□□ 0.99
Tpm1-215ENSMUST00000113705 Smg7Q5RJH6 1138 aaKnown RBP21.23■□□□□ 0.99
Tpm1-215ENSMUST00000113705 Efcab2Q9CQ46 164 aa21.23■□□□□ 0.99
Tpm1-215ENSMUST00000113705 AceP09470 1312 aa21.22■□□□□ 0.99
Tpm1-215ENSMUST00000113705 Igsf1Q7TQA1 1317 aa21.22■□□□□ 0.99
Tpm1-215ENSMUST00000113705 Cavin4A2AMM0 362 aa21.21■□□□□ 0.99
Tpm1-215ENSMUST00000113705 Stra8P70278 393 aa21.21■□□□□ 0.99
Tpm1-215ENSMUST00000113705 Map4k4P97820 1233 aaKnown RBP21.21■□□□□ 0.99
Tpm1-215ENSMUST00000113705 Ggnbp2Q5SV77 696 aa21.2■□□□□ 0.98
Tpm1-215ENSMUST00000113705 Prim1P20664 417 aa21.19■□□□□ 0.98
Tpm1-215ENSMUST00000113705 Btbd11Q6GQW0 1109 aa21.19■□□□□ 0.98
Tpm1-215ENSMUST00000113705 Usp19Q3UJD6 1360 aa21.19■□□□□ 0.98
Tpm1-215ENSMUST00000113705 Smarcc1P97496 1104 aa21.18■□□□□ 0.98
Tpm1-215ENSMUST00000113705 Znf541Q0GGX2 1363 aa21.18■□□□□ 0.98
Tpm1-215ENSMUST00000113705 Tiam2Q6ZPF3 1715 aa21.18■□□□□ 0.98
Tpm1-215ENSMUST00000113705 Dusp27Q148W8 1138 aa21.18■□□□□ 0.98
Tpm1-215ENSMUST00000113705 Miga2Q8BK03 593 aa21.18■□□□□ 0.98
Tpm1-215ENSMUST00000113705 Gm13023A2A8N2 498 aa21.17■□□□□ 0.98
Tpm1-215ENSMUST00000113705 Slc4a2P13808 1237 aaKnown RBP21.16■□□□□ 0.98
Tpm1-215ENSMUST00000113705 NrdcQ8BHG1 1161 aa21.16■□□□□ 0.98
Tpm1-215ENSMUST00000113705 Swt1Q9DBQ9 907 aa21.16■□□□□ 0.98
Tpm1-215ENSMUST00000113705 CoblQ5NBX1 1337 aaKnown RBP21.16■□□□□ 0.98
Tpm1-215ENSMUST00000113705 MeiocA2AG06 965 aa21.15■□□□□ 0.98
Tpm1-215ENSMUST00000113705 PigbQ9JJQ0 542 aa21.15■□□□□ 0.98
Tpm1-215ENSMUST00000113705 Myo5bP21271 1818 aa21.15■□□□□ 0.98
Tpm1-215ENSMUST00000113705 Hmgb2P30681 210 aaKnown RBP21.15■□□□□ 0.98
Tpm1-215ENSMUST00000113705 Clcn1Q64347 994 aa21.14■□□□□ 0.97
Tpm1-215ENSMUST00000113705 Msl1Q6PDM1 616 aa21.14■□□□□ 0.97
Tpm1-215ENSMUST00000113705 Chrna2Q91X60 512 aa21.14■□□□□ 0.97
Retrieved 100 of 22,080 RNA–protein pairs in 14.8 ms