RNA–Protein interactions for RNA: ENSMUST00000111047.8

Bdnf-207, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,042 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-207ENSMUST00000111047 Rrp12Q6P5B0 1295 aaKnown RBP9.16□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Casc1Q6TDU8 730 aa9.16□□□□□ -0.94
Bdnf-207ENSMUST00000111047 St18Q80TY4 1045 aa9.16□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Srgap3Q812A2 1099 aa9.16□□□□□ -0.94
Bdnf-207ENSMUST00000111047 CenppQ9CZ92 286 aa9.16□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Larp1bA0A0A6YXJ7 370 aaKnown RBP9.16□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Slc4a10Q5DTL9 1118 aa9.16□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Aldh1l2Q8K009 923 aa9.16□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Ddrgk1Q80WW9 315 aa9.15□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Cep170bQ80U49 1574 aa9.15□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Akap12Q9WTQ5 1684 aa9.15□□□□□ -0.94
Bdnf-207ENSMUST00000111047 RereQ80TZ9 1558 aa9.15□□□□□ -0.94
Bdnf-207ENSMUST00000111047 NpatQ8BMA5 1420 aa9.15□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Gsdma3Q5Y4Y6 464 aa9.15□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Plcd3Q8K2J0 785 aa9.15□□□□□ -0.94
Bdnf-207ENSMUST00000111047 AglF8VPN4 1532 aa9.15□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Ino80Q6ZPV2 1559 aa9.15□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Kif20aP97329 887 aa9.15□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Aifm3Q3TY86 605 aa9.15□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Adgrl1Q80TR1 1466 aa9.14□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Ythdc1E9Q5K9 736 aaKnown RBP9.14□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Pdlim2Q8R1G6 349 aa9.14□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Chmp4cQ9D7F7 232 aa9.14□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Ttc37F8VPK0 1563 aa9.14□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Kiaa0556Q8C753 1610 aa9.14□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Cwc27Q3TKY6 469 aa9.14□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Astn2Q80Z10 1352 aa9.14□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Atp7bQ64446 1462 aa9.14□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Pdia3P27773 505 aaKnown RBP9.13□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Pde3bQ61409 1100 aa9.13□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Nsfl1cQ9CZ44 370 aaKnown RBP9.13□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Antxr1Q9CZ52 562 aa9.13□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Brpf1B2RRD7 1212 aa9.13□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Nucb1Q02819 459 aaKnown RBP9.13□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Ptpdc1Q6NZK8 747 aa9.13□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Tex2Q6ZPJ0 1128 aaKnown RBP9.13□□□□□ -0.95
Bdnf-207ENSMUST00000111047 KinQ8K339 391 aa9.13□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Ppp1r42Q8R1Z4 357 aa9.13□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Kdm4cQ8VCD7 1054 aa9.13□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Glipr1l2Q9CQ35 332 aa9.13□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Prim1P20664 417 aa9.12□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Ccne1Q61457 408 aa9.12□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Bag4Q8CI61 457 aa9.12□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Bcar3Q9QZK2 820 aa9.12□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Nom1Q3UFM5 854 aaKnown RBP9.12□□□□□ -0.95
Bdnf-207ENSMUST00000111047 PogkQ80TC5 607 aa9.12□□□□□ -0.95
Bdnf-207ENSMUST00000111047 AnlnQ8K298 1121 aaKnown RBP9.12□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Ncapd2Q8K2Z4 1392 aa9.11□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Cfdp1O88271 295 aaKnown RBP9.11□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Fam83gQ5SWY7 812 aa9.11□□□□□ -0.95
Bdnf-207ENSMUST00000111047 MarsQ68FL6 902 aaKnown RBP9.11□□□□□ -0.95
Bdnf-207ENSMUST00000111047 TatQ8QZR1 454 aa9.11□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Tm6sf1P58749 370 aa9.11□□□□□ -0.95
Bdnf-207ENSMUST00000111047 NexnQ7TPW1 607 aa9.11□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Kif2cQ922S8 721 aa9.11□□□□□ -0.95
Bdnf-207ENSMUST00000111047 PtprmP28828 1452 aa9.11□□□□□ -0.95
Bdnf-207ENSMUST00000111047 ScaperF8VQ70 1398 aaKnown RBP9.11□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Znf541Q0GGX2 1363 aa9.11□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Pcmtd1P59913 357 aa9.1□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Gripap1Q8VD04 806 aa9.1□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Ppp6r3Q922D4 844 aa9.1□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Tceal9Q9DD24 104 aa9.1□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Trpm1Q2TV84 1622 aa9.1□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Rasa1E9PYG6 1038 aa9.1□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Fyb1O35601 819 aa9.1□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Kif4P33174 1231 aa9.1□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Jakmip1Q8BVL9 626 aa9.1□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Kif24Q6NWW5 1356 aa9.1□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Adamts7Q68SA9 1657 aa9.1□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Gm10563F6WIE4 79 aa9.09□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Il4rP16382 810 aa9.09□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Chl1P70232 1209 aa9.09□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Elp1Q7TT37 1333 aaKnown RBP9.09□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Hoxa7P02830 229 aa9.09□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Bloc1s4Q8VED2 215 aa9.09□□□□□ -0.95
Bdnf-207ENSMUST00000111047 Eya1P97767 591 aa9.09□□□□□ -0.95
Bdnf-207ENSMUST00000111047 MecomP14404 1042 aa9.08□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Chpf2Q3UU43 768 aa9.08□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Atg4a-psA0A0G2JFS9 396 aa9.08□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Tnnt2P50752 301 aa9.08□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Mphosph10Q810V0 681 aaKnown RBP9.08□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Atg4aQ8C9S8 396 aa9.08□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Dnajc14Q921R4 703 aa9.08□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Stk3Q9JI10 497 aa9.08□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Frmpd2A0A140LI67 1392 aa9.08□□□□□ -0.96
Bdnf-207ENSMUST00000111047 ImpactO55091 318 aa9.08□□□□□ -0.96
Bdnf-207ENSMUST00000111047 VgfQ0VGU4 617 aa9.08□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Ints3Q7TPD0 1041 aaKnown RBP9.08□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Ush1cQ9ES64 910 aa9.08□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Snap23O09044 210 aa9.08□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Fkbp4P30416 458 aa9.08□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Mrps27Q8BK72 415 aaKnown RBP9.08□□□□□ -0.96
Bdnf-207ENSMUST00000111047 PtpruB1AUH1 1446 aa9.08□□□□□ -0.96
Bdnf-207ENSMUST00000111047 PzpQ61838 1495 aa9.07□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Hecw2Q6I6G8 1578 aa9.07□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Bcl2l13P59017 434 aa9.07□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Nol12Q8BG17 217 aa9.07□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Sipa1l1Q8C0T5 1782 aa9.07□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Becn1O88597 448 aa9.07□□□□□ -0.96
Bdnf-207ENSMUST00000111047 Rnf214Q8BFU3 668 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms