RNA–Protein interactions for RNA: ENSMUST00000110520.9

Trim9-201, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-201ENSMUST00000110520 Brf1Q8CFK2 676 aa11.56□□□□□ -0.56
Trim9-201ENSMUST00000110520 Gimap6Q8K349 305 aa11.56□□□□□ -0.56
Trim9-201ENSMUST00000110520 Hs1bp3Q3TC93 395 aa11.56□□□□□ -0.56
Trim9-201ENSMUST00000110520 Gripap1Q8VD04 806 aa11.56□□□□□ -0.56
Trim9-201ENSMUST00000110520 Rnf17Q99MV7 1640 aa11.56□□□□□ -0.56
Trim9-201ENSMUST00000110520 Fam135bQ9DAI6 1403 aa11.56□□□□□ -0.56
Trim9-201ENSMUST00000110520 Ddx11Q6AXC6 880 aa11.56□□□□□ -0.56
Trim9-201ENSMUST00000110520 Gm32742A0A1B0GT42 1604 aa11.55□□□□□ -0.56
Trim9-201ENSMUST00000110520 Gm21663A0A0G2JE01 267 aa11.55□□□□□ -0.56
Trim9-201ENSMUST00000110520 Gm7361D3Z6R1 267 aa11.55□□□□□ -0.56
Trim9-201ENSMUST00000110520 5031410I06RikE9Q4E0 267 aa11.55□□□□□ -0.56
Trim9-201ENSMUST00000110520 Gm1979E9QAN3 267 aa11.55□□□□□ -0.56
Trim9-201ENSMUST00000110520 Gm5862K7N5V5 267 aa11.55□□□□□ -0.56
Trim9-201ENSMUST00000110520 Gm10220K7N660 267 aa11.55□□□□□ -0.56
Trim9-201ENSMUST00000110520 Ppfia3P60469 1194 aa11.55□□□□□ -0.56
Trim9-201ENSMUST00000110520 Ddx54Q8K4L0 874 aaKnown RBP11.55□□□□□ -0.56
Trim9-201ENSMUST00000110520 AnkarA2RT91 1465 aa11.55□□□□□ -0.56
Trim9-201ENSMUST00000110520 Uhrf1bp1lA2RSJ4 1457 aa11.55□□□□□ -0.56
Trim9-201ENSMUST00000110520 Abcc3B2RX12 1523 aa11.55□□□□□ -0.56
Trim9-201ENSMUST00000110520 Zpr1Q62384 459 aa11.55□□□□□ -0.56
Trim9-201ENSMUST00000110520 Dmrtc1Q9D9R7 182 aa11.55□□□□□ -0.56
Trim9-201ENSMUST00000110520 TefQ9JLC6 301 aa11.55□□□□□ -0.56
Trim9-201ENSMUST00000110520 Pdia3P27773 505 aaKnown RBP11.54□□□□□ -0.56
Trim9-201ENSMUST00000110520 F2rP30558 430 aa11.54□□□□□ -0.56
Trim9-201ENSMUST00000110520 Nlgn1Q99K10 843 aa11.54□□□□□ -0.56
Trim9-201ENSMUST00000110520 Znf326O88291 580 aa11.54□□□□□ -0.56
Trim9-201ENSMUST00000110520 Slc26a8Q8R0C3 999 aa11.54□□□□□ -0.56
Trim9-201ENSMUST00000110520 TkfcQ8VC30 578 aa11.54□□□□□ -0.56
Trim9-201ENSMUST00000110520 Samd1D3YXK1 519 aa11.54□□□□□ -0.56
Trim9-201ENSMUST00000110520 Trim28Q62318 834 aa11.54□□□□□ -0.56
Trim9-201ENSMUST00000110520 Nsfl1cQ9CZ44 370 aaKnown RBP11.54□□□□□ -0.56
Trim9-201ENSMUST00000110520 KdrP35918 1367 aa11.54□□□□□ -0.56
Trim9-201ENSMUST00000110520 Pa2g4P50580 394 aaKnown RBP11.53□□□□□ -0.56
Trim9-201ENSMUST00000110520 LifrP42703 1092 aa11.53□□□□□ -0.56
Trim9-201ENSMUST00000110520 Ccer1Q9CQL2 403 aa11.53□□□□□ -0.56
Trim9-201ENSMUST00000110520 Tceanc2Q8R2M0 207 aa11.53□□□□□ -0.56
Trim9-201ENSMUST00000110520 Il1rapl2Q9ERS6 686 aa11.53□□□□□ -0.56
Trim9-201ENSMUST00000110520 Kif4P33174 1231 aa11.53□□□□□ -0.56
Trim9-201ENSMUST00000110520 EvcP57680 1005 aa11.53□□□□□ -0.56
Trim9-201ENSMUST00000110520 Map3k2Q61083 619 aa11.53□□□□□ -0.56
Trim9-201ENSMUST00000110520 Nap1l3Q794H2 544 aa11.53□□□□□ -0.56
Trim9-201ENSMUST00000110520 Q9D9S1 216 aa11.53□□□□□ -0.56
Trim9-201ENSMUST00000110520 NpatQ8BMA5 1420 aa11.52□□□□□ -0.56
Trim9-201ENSMUST00000110520 Rasa1E9PYG6 1038 aa11.52□□□□□ -0.56
Trim9-201ENSMUST00000110520 Slc35g1Q8BY79 368 aa11.52□□□□□ -0.56
Trim9-201ENSMUST00000110520 Top1mtQ8R4U6 593 aa11.52□□□□□ -0.56
Trim9-201ENSMUST00000110520 Ints3Q7TPD0 1041 aaKnown RBP11.52□□□□□ -0.57
Trim9-201ENSMUST00000110520 Syce3B5KM66 88 aa11.52□□□□□ -0.57
Trim9-201ENSMUST00000110520 Smc4Q8CG47 1286 aa11.52□□□□□ -0.57
Trim9-201ENSMUST00000110520 Sh3bgrQ9WUZ7 214 aa11.52□□□□□ -0.57
Trim9-201ENSMUST00000110520 Ddx17Q501J6 650 aaKnown RBP11.51□□□□□ -0.57
Trim9-201ENSMUST00000110520 Rrp12Q6P5B0 1295 aaKnown RBP11.51□□□□□ -0.57
Trim9-201ENSMUST00000110520 Prune1Q8BIW1 454 aa11.51□□□□□ -0.57
Trim9-201ENSMUST00000110520 Dzip1Q8BMD2 852 aa11.51□□□□□ -0.57
Trim9-201ENSMUST00000110520 Ttc19Q8CC21 365 aa11.51□□□□□ -0.57
Trim9-201ENSMUST00000110520 Kdm5aQ3UXZ9 1690 aa11.51□□□□□ -0.57
Trim9-201ENSMUST00000110520 PnnO35691 725 aaKnown RBP11.51□□□□□ -0.57
Trim9-201ENSMUST00000110520 Hoxb7P09024 217 aa11.51□□□□□ -0.57
Trim9-201ENSMUST00000110520 Bcl11bQ99PV8 884 aa11.51□□□□□ -0.57
Trim9-201ENSMUST00000110520 Cdc42bpbQ7TT50 1713 aa11.51□□□□□ -0.57
Trim9-201ENSMUST00000110520 Dixdc1Q80Y83 711 aa11.51□□□□□ -0.57
Trim9-201ENSMUST00000110520 Bicd2Q921C5 820 aa11.51□□□□□ -0.57
Trim9-201ENSMUST00000110520 Zbtb22Q9Z0G7 638 aa11.51□□□□□ -0.57
Trim9-201ENSMUST00000110520 Abca6Q8K441 1624 aa11.5□□□□□ -0.57
Trim9-201ENSMUST00000110520 Hoxc9P09633 260 aa11.5□□□□□ -0.57
Trim9-201ENSMUST00000110520 Ltv1Q6NSQ7 470 aaKnown RBP11.5□□□□□ -0.57
Trim9-201ENSMUST00000110520 Bag4Q8CI61 457 aa11.5□□□□□ -0.57
Trim9-201ENSMUST00000110520 AnlnQ8K298 1121 aaKnown RBP11.5□□□□□ -0.57
Trim9-201ENSMUST00000110520 TimelessQ9R1X4 1197 aa11.5□□□□□ -0.57
Trim9-201ENSMUST00000110520 GpkowQ56A08 488 aa11.5□□□□□ -0.57
Trim9-201ENSMUST00000110520 Rnf20Q5DTM8 973 aa11.5□□□□□ -0.57
Trim9-201ENSMUST00000110520 Paxip1Q6NZQ4 1056 aa11.5□□□□□ -0.57
Trim9-201ENSMUST00000110520 Gm10093D3YYI8 482 aa11.49□□□□□ -0.57
Trim9-201ENSMUST00000110520 Hdac1O09106 482 aaKnown RBP11.49□□□□□ -0.57
Trim9-201ENSMUST00000110520 Gjb2Q00977 226 aa11.49□□□□□ -0.57
Trim9-201ENSMUST00000110520 Slc39a6Q8C145 765 aa11.49□□□□□ -0.57
Trim9-201ENSMUST00000110520 Kcnh5Q920E3 988 aa11.49□□□□□ -0.57
Trim9-201ENSMUST00000110520 Zfyve16Q80U44 1528 aa11.49□□□□□ -0.57
Trim9-201ENSMUST00000110520 Nucb1Q02819 459 aaKnown RBP11.49□□□□□ -0.57
Trim9-201ENSMUST00000110520 Cnnm3Q32NY4 713 aa11.49□□□□□ -0.57
Trim9-201ENSMUST00000110520 Smg7Q5RJH6 1138 aaKnown RBP11.49□□□□□ -0.57
Trim9-201ENSMUST00000110520 4933402E13RikQ9D4D2 429 aa11.49□□□□□ -0.57
Trim9-201ENSMUST00000110520 Gdpd2Q9ESM6 539 aa11.49□□□□□ -0.57
Trim9-201ENSMUST00000110520 R3hcc1Q8BSI6 488 aa11.49□□□□□ -0.57
Trim9-201ENSMUST00000110520 Rrs1Q9CYH6 365 aaKnown RBP11.49□□□□□ -0.57
Trim9-201ENSMUST00000110520 VgfQ0VGU4 617 aa11.49□□□□□ -0.57
Trim9-201ENSMUST00000110520 Dnajc5gQ8C632 165 aa11.49□□□□□ -0.57
Trim9-201ENSMUST00000110520 Iqgap1Q9JKF1 1657 aaKnown RBP11.48□□□□□ -0.57
Trim9-201ENSMUST00000110520 Igflr1Q3U4N7 345 aa11.48□□□□□ -0.57
Trim9-201ENSMUST00000110520 Tmc1Q8R4P5 757 aa11.48□□□□□ -0.57
Trim9-201ENSMUST00000110520 NhsB1AV60 1647 aa11.48□□□□□ -0.57
Trim9-201ENSMUST00000110520 Atg4a-psA0A0G2JFS9 396 aa11.48□□□□□ -0.57
Trim9-201ENSMUST00000110520 Atg4aQ8C9S8 396 aa11.48□□□□□ -0.57
Trim9-201ENSMUST00000110520 ShprhQ7TPQ3 1674 aa11.48□□□□□ -0.57
Trim9-201ENSMUST00000110520 Anapc15-psA0A140T8L6 141 aa11.48□□□□□ -0.57
Trim9-201ENSMUST00000110520 Bloc1s4Q8VED2 215 aa11.48□□□□□ -0.57
Trim9-201ENSMUST00000110520 CenppQ9CZ92 286 aa11.48□□□□□ -0.57
Trim9-201ENSMUST00000110520 Ankib1Q6ZPS6 1085 aa11.47□□□□□ -0.57
Trim9-201ENSMUST00000110520 Ddrgk1Q80WW9 315 aa11.47□□□□□ -0.57
Trim9-201ENSMUST00000110520 Pik3r4Q8VD65 1358 aa11.47□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 11.2 ms